Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g052860.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 5.3e-57 224.2 117 100.0
Sopen07g026410 Solanum pennellii HOM05D000538 ORTHO05D012213 4.7e-53 211.1 114 95.6
Solyc07g052750.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 3.2e-46 188.3 102 95.1
PGSC0003DMG400026206 Solanum tuberosum HOM05D000538 ORTHO05D012213 7.5e-43 177.2 111 84.7
Sopen07g026370 Solanum pennellii HOM05D000538 ORTHO05D012213 1.1e-41 173.3 102 91.2
Solyc07g052760.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 2.3e-39 165.6 98 85.7
Solyc07g052830.4 Solanum lycopersicum HOM05D000538 ORTHO05D012213 2.3e-39 165.6 105 82.9
PGSC0003DMG400026195 Solanum tuberosum HOM05D000538 ORTHO05D012213 1.5e-38 162.9 104 81.7
Sopen07g026420 Solanum pennellii HOM05D000538 ORTHO05D012213 3.3e-38 161.8 99 82.8
Sopen07g026380 Solanum pennellii HOM05D000538 ORTHO05D012213 7.2e-38 160.6 98 83.7
PGSC0003DMG400026193 Solanum tuberosum HOM05D000538 ORTHO05D012213 9.5e-38 160.2 98 82.7
Solyc07g052900.1 Solanum lycopersicum HOM05D000538 ORTHO05D000614 8.0e-37 157.1 104 77.9
Sopen07g026450 Solanum pennellii HOM05D000538 ORTHO05D012213 8.0e-37 157.1 104 77.9
PGSC0003DMG400026196 Solanum tuberosum HOM05D000538 ORTHO05D000614 2.3e-36 155.6 104 75.0
Solyc07g052870.2 Solanum lycopersicum HOM05D000538 ORTHO05D012213 4.4e-35 151.4 99 79.8
Sopen07g026360 Solanum pennellii HOM05D000538 ORTHO05D012213 7.5e-35 150.6 103 74.8
Sopen07g026390 Solanum pennellii HOM05D000538 ORTHO05D012213 7.5e-35 150.6 91 83.5
CAN.G86.22 Capsicum annuum HOM05D000538 ORTHO05D000614 1.7e-31 139.4 104 70.2
Peaxi162Scf00007g00141 Petunia axillaris HOM05D000538 ORTHO05D000614 2.9e-26 122.1 105 64.8
Nitab4.5_0003429g0050 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.7e-26 121.7 106 62.3
Nitab4.5_0001134g0160 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.2e-25 118.6 100 63.0
CAN.G492.89 Capsicum annuum HOM05D000538 ORTHO05D012213 2.0e-24 115.9 97 61.9
CAN.G150.1 Capsicum annuum HOM05D000538 ORTHO05D012213 1.0e-23 113.6 110 53.6
Solyc07g052820.1 Solanum lycopersicum HOM05D000538 ORTHO05D012213 1.7e-23 112.8 64 87.5
CAN.G2015.5 Capsicum annuum HOM05D000538 ORTHO05D012213 6.6e-23 110.9 110 52.7
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 3.2e-09 65.5 102 39.2
Nitab4.5_0000780g0050 Nicotiana tabacum HOM05D000538 ORTHO05D012213 3.2e-09 65.5 100 42.0
Cpa.g.sc8.251 Carica papaya HOM05D000538 ORTHO05D000614 5.4e-09 64.7 105 38.1
MSTRG.14159 Avicennia marina HOM05D000538 ORTHO05D000614 1.6e-08 63.2 101 41.6
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 1.6e-08 63.2 109 37.6
Rhsim06G0156300 Rhododendron simsii HOM05D000538 ORTHO05D000614 6.0e-08 61.2 104 40.4
Solyc07g052740.3 Solanum lycopersicum HOM05D000538 ORTHO05D012213 6.0e-08 61.2 42 76.2
MD09G1103400 Malus domestica HOM05D000538 ORTHO05D000614 2.3e-07 59.3 98 42.9
ClCG02G001630 Citrullus lanatus HOM05D000538 ORTHO05D000614 3.0e-07 58.9 95 38.9
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 5.1e-07 58.2 105 32.4
Rhsim11G0032500 Rhododendron simsii HOM05D000538 ORTHO05D000614 6.6e-07 57.8 80 42.5
RhsimUnG0059200 Rhododendron simsii HOM05D000538 ORTHO05D000614 6.6e-07 57.8 80 42.5
vmacro12238 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 8.6e-07 57.4 84 42.9
Sed0007057 Sechium edule HOM05D000538 ORTHO05D000614 1.1e-06 57.0 80 40.0
SalBow1G6852 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.5e-06 56.6 110 39.1
MELO3C018793.2 Cucumis melo HOM05D000538 ORTHO05D000614 2.5e-06 55.8 96 36.5
Rhsim11G0046900 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.5e-06 55.8 80 42.5
CAN.G6565.1 Capsicum annuum HOM05D000538 ORTHO05D012213 5.6e-06 54.7 44 56.8
Lju1220C3T4 Lonicera japonica HOM05D000538 ORTHO05D000614 5.6e-06 54.7 118 35.6
Prupe.3G222100 Prunus persica HOM05D000538 ORTHO05D000614 5.6e-06 54.7 86 39.5
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 7.3e-06 54.3 50 48.0
Sed0002193 Sechium edule HOM05D000538 ORTHO05D000614 7.3e-06 54.3 80 38.8
CSS0022087 Camellia sinensis var. sinensis HOM05D000538 ORTHO05D000614 9.5e-06 53.9 106 36.8


User provided reference genes

Program Settings