Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g042917.1 Solanum lycopersicum HOM05D001355 ORTHO05D002550 1.1e-48 196.4 109 100.0
PGSC0003DMG402013561 Solanum tuberosum HOM05D001355 ORTHO05D004435 3.5e-26 121.7 146 50.0
CAN.G57.3 Capsicum annuum HOM05D001355 ORTHO05D004435 2.9e-25 118.6 146 49.3
Nitab4.5_0000073g0440 Nicotiana tabacum HOM05D001355 ORTHO05D004435 8.6e-25 117.1 143 49.0
Nitab4.5_0000170g0230 Nicotiana tabacum HOM05D001355 ORTHO05D004435 4.2e-24 114.8 143 48.3
Nitab4.5_0000807g0170 Nicotiana tabacum HOM05D001355 ORTHO05D004435 4.2e-24 114.8 143 48.3
Nitab4.5_0002570g0010 Nicotiana tabacum HOM05D001355 ORTHO05D004435 7.2e-24 114.0 143 47.6
CAN.G1591.4 Capsicum annuum HOM05D001355 ORTHO05D004435 9.5e-24 113.6 143 47.6
SalBow6G6731 Salvia bowleyana HOM05D001355 ORTHO05D004435 1.6e-23 112.8 146 45.9
Peaxi162Scf00047g02454 Petunia axillaris HOM05D001355 ORTHO05D004435 2.8e-23 112.1 143 47.6
Solyc12g009400.2 Solanum lycopersicum HOM05D001355 ORTHO05D004435 3.6e-23 111.7 143 46.9
Solyc12g009410.2 Solanum lycopersicum HOM05D001355 ORTHO05D004435 3.6e-23 111.7 143 46.9
Sopen12g004390 Solanum pennellii HOM05D001355 ORTHO05D004435 3.6e-23 111.7 143 46.9
Sopen12g004400 Solanum pennellii HOM05D001355 ORTHO05D004435 3.6e-23 111.7 143 46.9
PGSC0003DMG400002921 Solanum tuberosum HOM05D001355 ORTHO05D004435 3.6e-23 111.7 143 46.9
Migut.D01961 Erythranthe guttata HOM05D001355 ORTHO05D004435 4.0e-22 108.2 146 45.2
Actinidia22219 Actinidia chinensis HOM05D001355 ORTHO05D004435 6.8e-22 107.5 143 46.2
Gohir.A12G116700 Gossypium hirsutum HOM05D001355 ORTHO05D004435 6.8e-22 107.5 146 48.6
Actinidia04171 Actinidia chinensis HOM05D001355 ORTHO05D004435 8.9e-22 107.1 143 46.2
Cc02_g39940 Coffea canephora HOM05D001355 ORTHO05D004435 8.9e-22 107.1 146 44.5
Sc01g0002190 Simmondsia chinensis HOM05D001355 ORTHO05D004435 1.2e-21 106.7 146 43.8
Dinv18760 Davidia involucrata HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 46.2
FvH4_7g17660 Fragaria vesca HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
FAN01G1819 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
FAN03G2680 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
FAN06G2862 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
FAN06G2960 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
FAN10G2035 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
FAN10G3904 Fragaria x ananassa HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
Lj3g0000851 Lotus japonicus HOM05D001355 ORTHO05D004435 2.0e-21 105.9 143 44.8
Duzib138G1500 Durio zibethinus HOM05D001355 ORTHO05D004435 2.6e-21 105.5 143 44.1
RcHm_v2.0_Chr1g0361101 Rosa chinensis HOM05D001355 ORTHO05D004435 2.6e-21 105.5 143 44.8
VMungo0331G2037 Vigna mungo HOM05D001355 ORTHO05D004435 2.6e-21 105.5 146 43.2
CSS0001663 Camellia sinensis var. sinensis HOM05D001355 ORTHO05D004435 3.4e-21 105.1 143 44.1
Gorai.008G208500 Gossypium raimondii HOM05D001355 ORTHO05D004435 3.4e-21 105.1 146 48.6
Medtr8g024310 Medicago truncatula HOM05D001355 ORTHO05D004435 3.4e-21 105.1 143 44.8
Gorai.008G130900 Gossypium raimondii HOM05D001355 ORTHO05D004435 4.4e-21 104.8 146 47.3
Psat4g164040 Pisum sativum HOM05D001355 ORTHO05D004435 4.4e-21 104.8 143 44.1
SGA_v2.0_scaffold114G31817 Striga asiatica HOM05D001355 ORTHO05D004435 4.4e-21 104.8 146 43.8
Ca_26062_v3 Cicer arietinum L. HOM05D001355 ORTHO05D004435 5.7e-21 104.4 143 44.1
DCAR_002977 Daucus carota HOM05D001355 ORTHO05D004435 5.7e-21 104.4 146 43.2
Lsat_1_v5_gn_6_23561 Lactuca sativa HOM05D001355 ORTHO05D004435 5.7e-21 104.4 160 40.6
Glyma.07G049600 Glycine max HOM05D001355 ORTHO05D004435 7.5e-21 104.0 143 44.8
Gohir.D11G105600 Gossypium hirsutum HOM05D001355 ORTHO05D004435 7.5e-21 104.0 143 43.4
TWI23G0366 Tripterygium wilfordii HOM05D001355 ORTHO05D004435 7.5e-21 104.0 143 44.8
Ah.05g178950 Amaranthus hybridus HOM05D001355 ORTHO05D004435 9.8e-21 103.6 146 43.8
MSTRG.4362 Avicennia marina HOM05D001355 ORTHO05D004435 9.8e-21 103.6 146 43.2
PGR042G0370 Punica granatum HOM05D001355 ORTHO05D004435 9.8e-21 103.6 143 44.1
Sabra02G0134400 Salix brachista HOM05D001355 ORTHO05D004435 9.8e-21 103.6 143 44.1
Thecc.01G333300 Theobroma cacao HOM05D001355 ORTHO05D004435 9.8e-21 103.6 143 43.4
TPR.G19841 Trifolium pratense HOM05D001355 ORTHO05D004435 9.8e-21 103.6 143 44.1
BolC8t52861H Brassica oleracea HOM05D001355 ORTHO05D004435 1.3e-20 103.2 146 44.5
Eucgr.E01069 Eucalyptus grandis HOM05D001355 ORTHO05D004435 1.3e-20 103.2 143 44.8
Manes.01G239900 Manihot esculenta HOM05D001355 ORTHO05D004435 1.3e-20 103.2 143 43.4
SGA_v2.0_scaffold7G04147 Striga asiatica HOM05D002435 ORTHO05D002550 1.3e-20 103.2 156 42.3
VMungo1309G2338 Vigna mungo HOM05D001355 ORTHO05D004435 1.3e-20 103.2 143 43.4
BcaC07g42362 Brassica carinata HOM05D001355 ORTHO05D004435 1.7e-20 102.8 146 43.8
Gohir.D12G120200 Gossypium hirsutum HOM05D001355 ORTHO05D004435 1.7e-20 102.8 146 46.6
Gorai.007G112900 Gossypium raimondii HOM05D001355 ORTHO05D004435 1.7e-20 102.8 143 42.7
Lsat_1_v5_gn_2_75740 Lactuca sativa HOM05D001355 ORTHO05D004435 1.7e-20 102.8 146 43.2
Oeu053274.1 Olea europaea HOM05D001355 ORTHO05D004435 1.7e-20 102.8 146 42.5
TWI14G0894 Tripterygium wilfordii HOM05D001355 ORTHO05D004435 1.7e-20 102.8 143 44.1
TWI59G1435 Tripterygium wilfordii HOM05D001355 ORTHO05D004435 2.2e-20 102.4 143 44.1
vmacro11486 Vaccinium macrocarpon HOM05D001355 ORTHO05D004435 2.2e-20 102.4 143 43.4
Aa31LG1G10460 Aethionema arabicum HOM05D001355 ORTHO05D010028 2.8e-20 102.1 146 43.8
ATR0743G158 Amborella trichopoda HOM05D001355 ORTHO05D004435 2.8e-20 102.1 146 42.5
MSTRG.9680 Avicennia marina HOM05D001355 ORTHO05D004435 2.8e-20 102.1 146 42.5
Rhsim02G0253800 Rhododendron simsii HOM05D001355 ORTHO05D004435 2.8e-20 102.1 143 43.4
C08p53460 Brassica napus HOM05D001355 ORTHO05D004435 3.7e-20 101.7 146 43.8
Glyma.16G018300 Glycine max HOM05D001355 ORTHO05D004435 3.7e-20 101.7 143 43.4
Gohir.A11G101000 Gossypium hirsutum HOM05D001355 ORTHO05D004435 3.7e-20 101.7 143 42.7
Hund16752 Selenicereus undatus HOM05D001355 ORTHO05D004435 3.7e-20 101.7 146 42.5
unitig_744.g24397 Utricularia gibba HOM05D001355 ORTHO05D004435 3.7e-20 101.7 146 41.8
COL.COLO4_23047 Corchorus olitorius HOM05D001355 ORTHO05D004435 4.9e-20 101.3 143 42.7
Thhalv10007695m.g Eutrema salsugineum HOM05D001355 ORTHO05D004435 4.9e-20 101.3 146 43.2
arahy.Tifrunner.gnm1.ann1.VQ9M9S Arachis hypogaea HOM05D001355 ORTHO05D004435 6.3e-20 100.9 143 42.0
TAR375G0155 Trochodendron aralioides HOM05D001355 ORTHO05D004435 6.3e-20 100.9 143 44.1
BcaC07g42365 Brassica carinata HOM05D001355 ORTHO05D004435 8.3e-20 100.5 146 43.2
BcaC07g42368 Brassica carinata HOM05D001355 ORTHO05D004435 8.3e-20 100.5 146 43.2
BcaC07g42372 Brassica carinata HOM05D001355 ORTHO05D004435 8.3e-20 100.5 146 43.2
CDE08G0084 Ceratophyllum demersum HOM05D001355 ORTHO05D004435 8.3e-20 100.5 155 39.4
Haze_15734 Corylus avellana HOM05D001355 ORTHO05D004435 8.3e-20 100.5 143 43.4
Manes.05G016500 Manihot esculenta HOM05D001355 ORTHO05D004435 8.3e-20 100.5 143 43.4
A10p00800 Brassica napus HOM05D001355 ORTHO05D004435 1.1e-19 100.1 146 43.2
BraA10t42356Z Brassica rapa HOM05D001355 ORTHO05D004435 1.1e-19 100.1 146 43.2
Cfa003735 Carpinus fangiana HOM05D001355 ORTHO05D004435 1.1e-19 100.1 143 42.7
HanXRQChr13g0426481 Helianthus annuus HOM05D001355 ORTHO05D004435 1.1e-19 100.1 146 42.5
MBI12_g11800_MAGBIO Magnolia biondii HOM05D001355 ORTHO05D004435 1.1e-19 100.1 146 43.2
Mapoly0005s0206 Marchantia polymorpha HOM05D001355 ORTHO05D004435 1.1e-19 100.1 146 45.9
Phvul.010G119600 Phaseolus vulgaris HOM05D001355 ORTHO05D004435 1.1e-19 100.1 146 41.8
unitig_21.g20446 Utricularia gibba HOM05D001355 ORTHO05D004435 1.1e-19 100.1 146 41.8
CARHR001370 Cardamine hirsuta HOM05D001355 ORTHO05D004435 1.4e-19 99.8 146 42.5
ECA247G2213 Erigeron canadensis HOM05D001355 ORTHO05D004435 1.4e-19 99.8 146 41.8
Prupe.2G197700 Prunus persica HOM05D001355 ORTHO05D004435 1.4e-19 99.8 143 43.4
QL08p047239 Quercus lobata HOM05D001355 ORTHO05D004435 1.4e-19 99.8 143 42.0
Sp1g01190 Schrenkiella parvula HOM05D001355 ORTHO05D004435 1.4e-19 99.8 146 42.5
C08p52820 Brassica napus HOM05D001355 ORTHO05D004435 1.8e-19 99.4 146 43.2
Cpa.g.sc193.13 Carica papaya HOM05D001355 ORTHO05D004435 1.8e-19 99.4 143 43.4
Ca_09545_v3 Cicer arietinum L. HOM05D001355 ORTHO05D004435 1.8e-19 99.4 146 41.8
Lj2A152G22 Lonicera japonica HOM05D001355 ORTHO05D004435 1.8e-19 99.4 143 42.7
GSVIVG01027439001 Vitis vinifera HOM05D001355 ORTHO05D004435 1.8e-19 99.4 143 42.7
Aa31LG5G1160 Aethionema arabicum HOM05D001355 ORTHO05D004435 3.1e-19 98.6 146 43.2
Aqoxy5G04344 Aquilegia oxysepala HOM05D001355 ORTHO05D004435 3.1e-19 98.6 146 41.1
Dinv32644 Davidia involucrata HOM05D001355 ORTHO05D004435 3.1e-19 98.6 143 40.6
Lsat_1_v5_gn_3_140821 Lactuca sativa HOM05D001355 ORTHO05D004435 3.1e-19 98.6 146 41.1
Os04g0119400 Oryza sativa ssp. japonica HOM05D001355 ORTHO05D004435 3.1e-19 98.6 146 41.1
Potri.002G179500 Populus trichocarpa HOM05D001355 ORTHO05D004435 3.1e-19 98.6 143 42.7
AL1G11430 Arabidopsis lyrata HOM05D001355 ORTHO05D004435 4.1e-19 98.2 146 42.5
AT1G01090 Arabidopsis thaliana HOM05D001355 ORTHO05D004435 4.1e-19 98.2 146 42.5
BolC5t28867H Brassica oleracea HOM05D001355 ORTHO05D004435 4.1e-19 98.2 146 42.5
Carub.0001s0113 Capsella rubella HOM05D001355 ORTHO05D004435 4.1e-19 98.2 146 42.5
Gohir.D12G193800 Gossypium hirsutum HOM05D001355 ORTHO05D004435 4.1e-19 98.2 146 41.8
MBI04_g22065_MAGBIO Magnolia biondii HOM05D001355 ORTHO05D004435 4.1e-19 98.2 146 41.8
SEGI_39603 Sequoiadendron giganteum HOM05D001355 ORTHO05D004435 4.1e-19 98.2 146 41.8
Atru.chr5.767 Acer truncatum HOM05D001355 ORTHO05D004435 5.4e-19 97.8 143 42.0
AUR62038348 Chenopodium quinoa HOM05D001355 ORTHO05D004435 5.4e-19 97.8 146 41.1
Glyma.19G260000 Glycine max HOM05D001355 ORTHO05D004435 5.4e-19 97.8 143 42.0
Zm00001eb089020 Zea mays HOM05D001355 ORTHO05D004435 5.4e-19 97.8 146 41.1
PSO675G4431 Papaver somniferum HOM05D001355 ORTHO05D004435 7.0e-19 97.4 143 41.3
A09p68890 Brassica napus HOM05D001355 ORTHO05D004435 9.2e-19 97.1 146 42.5
C05p00840 Brassica napus HOM05D001355 ORTHO05D004435 9.2e-19 97.1 146 41.8
BraA09t42229Z Brassica rapa HOM05D001355 ORTHO05D004435 9.2e-19 97.1 146 42.5
AUR62041497 Chenopodium quinoa HOM05D001355 ORTHO05D004435 1.2e-18 96.7 146 41.8
PSO017G0474 Papaver somniferum HOM05D001355 ORTHO05D004435 1.2e-18 96.7 143 41.3
PSO063G1331 Papaver somniferum HOM05D001355 ORTHO05D004435 1.2e-18 96.7 143 41.3
PSO541G6414 Papaver somniferum HOM05D001355 ORTHO05D004435 1.2e-18 96.7 143 41.3
MD07G1159600 Malus domestica HOM05D001355 ORTHO05D004435 1.6e-18 96.3 143 41.3
THA.LOC104801350 Tarenaya hassleriana HOM05D001355 ORTHO05D004435 1.6e-18 96.3 143 42.0
Atru.chr9.1849 Acer truncatum HOM05D001355 ORTHO05D004435 2.0e-18 95.9 156 40.4
SEGI_07156 Sequoiadendron giganteum HOM05D001355 ORTHO05D004435 2.0e-18 95.9 146 39.0
Hma1.2p1_0074F.1_g038730 Hydrangea macrophylla HOM05D001355 ORTHO05D004435 2.7e-18 95.5 143 49.0
Glyma.03G261000 Glycine max HOM05D001355 ORTHO05D004435 3.5e-18 95.1 143 40.6
Oeu007913.1 Olea europaea HOM05D001355 ORTHO05D004435 3.5e-18 95.1 143 41.3
CANSAT56G2429 Cannabis sativa HOM05D001355 ORTHO05D004435 4.5e-18 94.7 143 41.3
Sed0023392 Sechium edule HOM05D001355 ORTHO05D004435 4.5e-18 94.7 143 40.6
THA.LOC104825902 Tarenaya hassleriana HOM05D001355 ORTHO05D004435 5.9e-18 94.4 143 42.0
EL10Ac3g06767 Beta vulgaris HOM05D001355 ORTHO05D004435 7.8e-18 94.0 146 39.0
MELO3C022306.2 Cucumis melo HOM05D001355 ORTHO05D004435 7.8e-18 94.0 143 41.3
CDE08G0646 Ceratophyllum demersum HOM05D001355 ORTHO05D004435 1.0e-17 93.6 146 38.4
CsaV3_6G008320 Cucumis sativus L. HOM05D001355 ORTHO05D004435 1.0e-17 93.6 143 41.3
Lsat_1_v5_gn_8_101580 Lactuca sativa HOM05D001355 ORTHO05D004052 1.0e-17 93.6 151 39.7
Psat0s3525g0080 Pisum sativum HOM05D001355 ORTHO05D004435 1.0e-17 93.6 143 40.6
TAR374G0567 Trochodendron aralioides HOM05D001355 ORTHO05D004435 1.3e-17 93.2 141 41.1
ClCG06G002270 Citrullus lanatus HOM05D001355 ORTHO05D004435 1.7e-17 92.8 143 40.6
Ciclev10020210m.g Citrus clementina HOM05D001355 ORTHO05D004435 1.7e-17 92.8 143 42.0
Phvul.009G257800 Phaseolus vulgaris HOM05D001355 ORTHO05D004435 1.7e-17 92.8 143 39.9
SMO118G0177 Selaginella moellendorffii HOM05D001355 ORTHO05D004435 1.7e-17 92.8 146 39.0
Eucgr.E01071 Eucalyptus grandis HOM05D001355 ORTHO05D004435 2.3e-17 92.4 143 42.0
Lalb_Chr10g0100881 Lupinus albus HOM05D001355 ORTHO05D004435 2.3e-17 92.4 143 40.6
HPP92_021499 Vanilla planifolia HOM05D001355 ORTHO05D004435 2.3e-17 92.4 146 39.0
HPP92_021520 Vanilla planifolia HOM05D001355 ORTHO05D004435 2.3e-17 92.4 146 39.0
Sed0007101 Sechium edule HOM05D001355 ORTHO05D004435 2.9e-17 92.0 143 39.9
Pp3c15_8520 Physcomitrium patens HOM05D001355 ORTHO05D004435 5.0e-17 91.3 146 39.7
AagrBONN_evm.TU.Sc2ySwM_368.305 Anthoceros agrestis HOM05D001355 ORTHO05D004435 6.6e-17 90.9 146 39.0
arahy.Tifrunner.gnm1.ann1.G7YSG8 Arachis hypogaea HOM05D001355 ORTHO05D004435 6.6e-17 90.9 143 39.2
Pp3c9_5460 Physcomitrium patens HOM05D001355 ORTHO05D004435 8.6e-17 90.5 146 39.0
Pp3c9_5550 Physcomitrium patens HOM05D001355 ORTHO05D004435 8.6e-17 90.5 146 39.0
Oeu043195.1 Olea europaea HOM05D001355 ORTHO05D004435 2.5e-16 89.0 147 38.8
vmacro12644 Vaccinium macrocarpon HOM05D001355 ORTHO05D016189 3.3e-16 88.6 91 50.5
BcaC07g42258 Brassica carinata HOM05D001355 ORTHO05D004435 5.6e-16 87.8 140 40.7
AagrBONN_evm.TU.Sc2ySwM_368.294 Anthoceros agrestis HOM05D001355 ORTHO05D004435 9.5e-16 87.0 146 37.7
Gorai.008G131200 Gossypium raimondii HOM05D001355 ORTHO05D004435 3.0e-14 82.0 91 47.3
Actinidia28086 Actinidia chinensis HOM05D001355 ORTHO05D004435 2.6e-13 79.0 91 50.5
BcaC07g42249 Brassica carinata HOM05D001355 ORTHO05D004435 7.5e-13 77.4 146 39.0
TPR.G4770 Trifolium pratense HOM05D001355 ORTHO05D004435 7.5e-13 77.4 89 46.1
Gohir.A12G191500 Gossypium hirsutum HOM05D001355 ORTHO05D004435 1.3e-12 76.6 91 48.4
arahy.Tifrunner.gnm1.ann1.0U4Z5X Arachis hypogaea HOM05D001355 ORTHO05D004435 3.7e-12 75.1 117 39.3
Nn3g18802 Nelumbo nucifera HOM05D001355 ORTHO05D004435 6.4e-12 74.3 91 47.3
BcaB03g13555 Brassica carinata HOM05D001355 ORTHO05D010028 1.9e-11 72.8 91 48.4
CDE02G4262 Ceratophyllum demersum HOM05D001355 ORTHO05D004435 1.9e-11 72.8 91 45.1
RcHm_v2.0_Chr1g0334521 Rosa chinensis HOM05D001355 ORTHO05D004435 7.0e-11 70.9 82 47.6
AUR62016854 Chenopodium quinoa HOM05D001355 ORTHO05D004435 2.7e-10 68.9 107 41.1
Oeu028218.1 Olea europaea HOM05D001355 ORTHO05D004435 2.7e-10 68.9 118 38.1
arahy.Tifrunner.gnm1.ann1.LI6EZ2 Arachis hypogaea HOM05D001355 ORTHO05D004435 2.3e-09 65.9 91 44.0
SGA_v2.0_scaffold173G39199 Striga asiatica HOM05D001355 ORTHO05D016189 3.9e-09 65.1 90 41.1
arahy.Tifrunner.gnm1.ann1.6IHK1L Arachis hypogaea HOM05D001355 ORTHO05D004435 6.6e-09 64.3 91 42.9
arahy.Tifrunner.gnm1.ann1.L5PSIR Arachis hypogaea HOM05D001355 ORTHO05D004435 6.6e-09 64.3 91 42.9
CBR_g48779 Chara braunii HOM05D001355 ORTHO05D004435 1.5e-08 63.2 87 40.2
SMO334G0021 Selaginella moellendorffii HOM05D001355 ORTHO05D002550 9.5e-08 60.5 80 46.2
Cre02.g099850 Chlamydomonas reinhardtii HOM05D001355 ORTHO05D004435 2.8e-07 58.9 143 30.1
SGA_v2.0_scaffold24G10324 Striga asiatica HOM05D001355 ORTHO05D016189 1.8e-06 56.2 78 41.0
SGA_v2.0_scaffold25G10722 Striga asiatica HOM05D001355 ORTHO05D004435 4.0e-06 55.1 99 34.3
SGA_v2.0_scaffold113G31766 Striga asiatica HOM05D001355 ORTHO05D016189 8.9e-06 53.9 83 41.0


User provided reference genes

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