Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g039615.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 7.1e-71 270.4 128 100.0
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.4e-33 145.2 128 61.7
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.9e-30 134.0 146 50.0
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.9e-30 134.0 133 57.9
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.1e-29 131.3 105 65.7
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.7e-29 131.0 105 63.8
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.8e-29 130.6 110 65.5
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.8e-29 130.6 114 59.6
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.5e-28 129.8 130 51.5
Nitab4.5_0000074g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-27 125.6 109 59.6
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 7.2e-23 110.9 113 54.0
Nitab4.5_0009529g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.6e-22 108.6 99 62.6
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 4.0e-21 105.1 123 48.0
Sopen01g012110 Solanum pennellii HOM05D002954 ORTHO05D003353 6.7e-21 104.4 69 69.6
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-20 102.8 128 48.4
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.7e-20 100.5 156 38.5
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 2.8e-19 99.0 128 44.5
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.1e-18 97.1 112 44.6
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-18 96.7 126 49.2
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-18 96.7 113 44.2
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 3.1e-18 95.5 113 46.0
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.3e-18 94.7 114 43.0
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 1.2e-17 93.6 113 44.2
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-17 93.6 92 53.3
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-17 92.8 126 42.1
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 3.5e-17 92.0 113 45.1
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.9e-17 91.3 115 44.3
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 7.7e-17 90.9 115 41.7
Nitab4.5_0009966g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-16 90.1 123 41.5
Nitab4.5_0007579g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-16 89.4 103 48.5
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.2e-16 89.4 110 40.9
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 2.9e-16 89.0 113 43.4
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 8.5e-16 87.4 106 45.3
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 1.1e-15 87.0 125 42.4
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 1.9e-15 86.3 113 41.6
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 1.9e-15 86.3 115 38.3
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.9e-15 86.3 115 38.3
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.6e-14 82.0 107 41.1
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 1.4e-13 80.1 119 37.0
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.4e-13 80.1 113 41.6
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.2e-13 78.2 59 71.2
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 6.8e-13 77.8 129 31.0
Nitab4.5_0002100g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.8e-13 77.8 120 37.5
Peaxi162Scf00109g00210 Petunia axillaris HOM05D002954 ORTHO05D003353 8.8e-13 77.4 130 35.4
Peaxi162Scf00818g00410 Petunia axillaris HOM05D002954 ORTHO05D003353 8.8e-13 77.4 130 35.4
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 1.5e-12 76.6 130 33.8
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 4.4e-12 75.1 123 35.8
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 5.7e-12 74.7 123 35.8
Nitab4.5_0002227g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-11 73.2 73 56.2
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 1.7e-11 73.2 128 32.8
Lj2g0004380 Lotus japonicus HOM05D005022 ORTHO05D002200 3.7e-11 72.0 97 35.1
Peaxi162Scf00005g00443 Petunia axillaris HOM05D002954 ORTHO05D003353 4.8e-11 71.6 100 40.0
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 1.1e-10 70.5 89 39.3
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 1.1e-10 70.5 129 34.1
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 3.1e-10 68.9 129 32.6
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 3.1e-10 68.9 129 32.6
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.1e-10 68.6 109 32.1
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.4e-10 68.2 96 41.7
Nitab4.5_0008563g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.4e-10 68.2 65 49.2
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 5.4e-10 68.2 87 52.9
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 9.1e-10 67.4 120 35.0
arahy.Tifrunner.gnm1.ann1.Y6RTQD Arachis hypogaea HOM05D002954 ORTHO05D010308 1.2e-09 67.0 113 37.2
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 1.2e-09 67.0 80 40.0
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 1.6e-09 66.6 130 30.8
arahy.Tifrunner.gnm1.ann1.E8HHXW Arachis hypogaea HOM05D002954 ORTHO05D010308 2.0e-09 66.2 113 36.3
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 2.0e-09 66.2 110 35.5
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.5e-09 65.1 109 30.3
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 5.9e-09 64.7 111 38.7
TPR.G22956 Trifolium pratense HOM05D013784 ORTHO05D003353 2.9e-08 62.4 80 41.2
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 7.2e-07 57.8 111 36.0
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 7.2e-07 57.8 111 36.0
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 7.2e-07 57.8 113 31.9
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.2e-07 57.8 110 34.5
Phvul.008G147600 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 7.2e-07 57.8 72 38.9
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 1.2e-06 57.0 65 40.0
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 2.1e-06 56.2 113 31.9
VMungo0464G1180 Vigna mungo HOM05D003555 ORTHO05D004542 2.1e-06 56.2 95 30.5
VMungo0720G1591 Vigna mungo HOM05D002954 ORTHO05D000385 4.7e-06 55.1 50 42.0
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.1e-06 54.7 29 82.8
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 8.0e-06 54.3 111 36.0


User provided reference genes

Program Settings