Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g020890.1 Solanum lycopersicum HOM05D015155 ORTHO05D020600 9.5e-56 219.9 111 100.0
Sopen03g035870 Solanum pennellii HOM05D000555 ORTHO05D000646 7.1e-43 177.2 109 80.7
PGSC0003DMG400019830 Solanum tuberosum HOM05D015155 ORTHO05D002272 1.0e-41 173.3 109 79.8
Solyc03g116950.2 Solanum lycopersicum HOM05D015155 ORTHO05D020600 1.5e-40 169.5 109 78.0
Solyc07g020920.1 Solanum lycopersicum HOM05D015155 ORTHO05D020600 4.0e-38 161.4 111 76.6
Solyc03g116930.3 Solanum lycopersicum HOM05D000555 ORTHO05D000646 1.1e-30 136.7 99 71.7
Sopen03g035880 Solanum pennellii HOM05D000555 ORTHO05D000646 2.1e-26 122.5 87 74.7
CAN.G407.58 Capsicum annuum HOM05D000555 ORTHO05D000646 2.7e-26 122.1 109 59.6
Sopen03g035910 Solanum pennellii HOM05D000555 ORTHO05D000646 7.9e-26 120.6 109 59.6
PGSC0003DMG400019829 Solanum tuberosum HOM05D000555 ORTHO05D000646 2.1e-23 112.5 77 68.8
Solyc03g116970.3 Solanum lycopersicum HOM05D000555 ORTHO05D000646 1.8e-22 109.4 77 67.5
Nitab4.5_0001454g0160 Nicotiana tabacum HOM05D000555 ORTHO05D000646 2.4e-22 109.0 111 50.5
Solyc03g116940.3 Solanum lycopersicum HOM05D000555 ORTHO05D000646 3.1e-22 108.6 77 67.5
Nitab4.5_0004147g0010 Nicotiana tabacum HOM05D000555 ORTHO05D000646 3.3e-16 88.6 95 50.5
Solyc03g117010.4 Solanum lycopersicum HOM05D000555 ORTHO05D000646 4.8e-15 84.7 81 58.0
HanXRQChr03g0080231 Helianthus annuus HOM05D000555 ORTHO05D000646 4.2e-11 71.6 105 35.2
ECA247G1300 Erigeron canadensis HOM05D010915 ORTHO05D002272 1.6e-10 69.7 107 35.5
ECA247G4030 Erigeron canadensis HOM05D009001 ORTHO05D011396 7.9e-10 67.4 109 33.0
HanXRQChr02g0033861 Helianthus annuus HOM05D002972 ORTHO05D002272 1.4e-09 66.6 105 32.4
ECA247G0643 Erigeron canadensis HOM05D002069 ORTHO05D002997 2.3e-09 65.9 107 35.5
ECA247G2469 Erigeron canadensis HOM05D000555 ORTHO05D000646 3.0e-09 65.5 109 31.2
Oeu028335.1 Olea europaea HOM05D000555 ORTHO05D002272 5.1e-09 64.7 107 39.3
ECA247G3063 Erigeron canadensis HOM05D000555 ORTHO05D000646 6.7e-09 64.3 102 36.3
ECA247G2489 Erigeron canadensis HOM05D000555 ORTHO05D000646 1.1e-08 63.5 107 32.7
TWI18G1012 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 1.1e-08 63.5 103 33.0
PGSC0003DMG400017042 Solanum tuberosum HOM05D000555 ORTHO05D002272 1.5e-08 63.2 57 56.1
Solyc03g120360.1 Solanum lycopersicum HOM05D002972 ORTHO05D002272 9.7e-08 60.5 103 36.9
Sopen03g039250 Solanum pennellii HOM05D002972 ORTHO05D002272 9.7e-08 60.5 103 36.9
DCAR_025574 Daucus carota HOM05D000555 ORTHO05D000646 1.7e-07 59.7 100 35.0
Sopen03g039260 Solanum pennellii HOM05D002972 ORTHO05D002272 2.8e-07 58.9 107 34.6
PGSC0003DMG400002637 Solanum tuberosum HOM05D002972 ORTHO05D002272 3.7e-07 58.5 103 35.0
CAN.G438.50 Capsicum annuum HOM05D002972 ORTHO05D002272 4.8e-07 58.2 104 31.7
unitig_0.g1105 Utricularia gibba HOM05D002972 ORTHO05D002272 8.2e-07 57.4 109 29.4
PGSC0003DMG400002638 Solanum tuberosum HOM05D002972 ORTHO05D002272 1.4e-06 56.6 104 34.6
Manes.11G065600 Manihot esculenta HOM05D000555 ORTHO05D000646 1.8e-06 56.2 102 37.3
ECA236G0425 Erigeron canadensis HOM05D000555 ORTHO05D000646 4.1e-06 55.1 106 30.2
ECA247G2737 Erigeron canadensis HOM05D007234 ORTHO05D000570 5.3e-06 54.7 103 32.0


User provided reference genes

Program Settings