Gene: Sopen03g035880
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g035880
- Transcript Identifier Sopen03g035880.1
- Gene Type Coding gene
- Location Spenn-ch03 : 70711820-70734593 : negative
Gene Family Information
- ID HOM05D000555
- #Genes/#Species 991/100
- Phylogenetic origin
- ID ORTHO05D000646
- #Genes/#Species 715/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g035880.1
Descriptions
- Description Tudor/PWWP/MBT superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Armadillo-type fold | BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007064 | IEA | InterPro | mitotic sister chromatid cohesion | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G80810 |
| GO:0006310 | ISO | PLAZA Integrative Orthology | DNA recombination | AT1G80810 |
| GO:0009556 | ISO | PLAZA Integrative Orthology | microsporogenesis | AT1G15940 |
| GO:0035825 | ISO | PLAZA Integrative Orthology | homologous recombination | AT1G80810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G15940 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G15940 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.3.4.3.2 | Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin establishment.cohesin cofactor (PDS5) |