Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g014750.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.9e-82 307.0 148 100.0
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 5.1e-73 277.7 141 93.6
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 4.4e-72 274.6 141 92.9
Sopen11g020370 Solanum pennellii HOM05D002261 ORTHO05D002334 1.7e-71 272.7 141 92.9
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.4e-70 268.9 141 90.8
Sopen03g011240 Solanum pennellii HOM05D002538 ORTHO05D002334 9.1e-70 266.9 134 94.0
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.9e-65 251.5 140 85.0
Solyc11g013730.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.6e-64 248.8 172 72.7
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-63 245.4 141 85.1
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.4e-62 243.0 140 81.4
PGSC0003DMG400009893 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.6e-58 229.6 140 76.4
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.8e-57 226.1 140 73.6
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.0e-57 225.3 140 73.6
PGSC0003DMG400022355 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.2e-57 224.6 140 73.6
Solyc05g017795.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.8e-52 208.4 108 91.7
Solyc03g150112.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.1e-46 190.3 98 90.8
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.0e-45 186.0 110 75.5
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.6e-44 180.6 114 71.9
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-43 180.3 106 76.4
Solyc09g055990.2 Solanum lycopersicum HOM05D000049 ORTHO05D002334 7.2e-43 177.6 126 72.2
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-40 170.2 140 57.1
PGSC0003DMG400021840 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.2e-39 166.0 138 58.7
CAN.G15.23 Capsicum annuum HOM05D002261 ORTHO05D002334 2.8e-39 165.6 140 52.1
CAN.G933.9 Capsicum annuum HOM05D002261 ORTHO05D002334 2.4e-38 162.5 143 51.0
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 6.6e-36 154.5 150 56.0
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-35 153.7 134 49.3
Solyc02g005070.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.6e-34 149.8 83 85.5
PGSC0003DMG401024222 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.4e-33 146.7 89 75.3
Nitab4.5_0005791g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.0e-33 145.6 133 53.4
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.6e-29 133.3 78 78.2
Peaxi162Scf00558g00118 Petunia axillaris HOM05D002261 ORTHO05D002334 8.9e-25 117.5 140 41.4
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 2.6e-24 115.9 138 42.0
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-24 114.4 138 40.6
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 1.7e-23 113.2 73 80.8
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 2.9e-23 112.5 141 40.4
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 6.4e-23 111.3 141 40.4
Peaxi162Scf00345g00126 Petunia axillaris HOM05D002261 ORTHO05D002334 6.4e-23 111.3 138 39.1
Nitab4.5_0000230g0260 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-21 106.7 127 44.1
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 7.8e-21 104.4 125 40.0
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 2.3e-20 102.8 138 37.0
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 3.0e-20 102.4 135 40.7
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 3.0e-20 102.4 64 79.7
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-19 100.5 145 35.2
Peaxi162Scf00582g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 7.3e-19 97.8 124 37.9
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-18 97.1 145 35.2
Nitab4.5_0003524g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-18 95.9 96 52.1
Nitab4.5_0000877g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-17 94.0 121 39.7
Nitab4.5_0009143g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-17 94.0 104 41.3
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 4.0e-17 92.0 143 33.6
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-16 90.5 145 33.1
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-16 90.1 65 61.5
Nitab4.5_0006835g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.0e-16 89.7 142 30.3
Nitab4.5_0000105g0350 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-16 89.0 142 30.3
Nitab4.5_0001709g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.8e-16 88.2 70 57.1
Peaxi162Scf00211g00164 Petunia axillaris HOM05D002261 ORTHO05D002334 5.8e-16 88.2 134 35.8
Nitab4.5_0005054g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.9e-16 87.4 101 43.6
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 9.9e-16 87.4 118 38.1
PGSC0003DMG400025596 Solanum tuberosum HOM05D000072 ORTHO05D002334 9.9e-16 87.4 83 53.0
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 2.2e-15 86.3 140 35.7
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.2e-15 86.3 140 35.7
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 2.9e-15 85.9 114 43.9
Peaxi162Scf00007g01337 Petunia axillaris HOM05D002261 ORTHO05D002334 4.9e-15 85.1 104 43.3
Nitab4.5_0000230g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-14 84.0 133 33.1
Peaxi162Scf00842g00011 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-14 84.0 127 36.2
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.4e-14 83.6 138 32.6
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 1.4e-14 83.6 127 38.6
CAN.G217.14 Capsicum annuum HOM05D002261 ORTHO05D002334 1.9e-14 83.2 60 58.3
CAN.G784.3 Capsicum annuum HOM05D002261 ORTHO05D002334 4.1e-14 82.0 68 52.9
Nitab4.5_0006911g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.1e-14 82.0 172 28.5
PGSC0003DMG400044414 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.4e-14 81.6 64 56.2
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 7.1e-14 81.3 101 40.6
Nitab4.5_0001522g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-13 80.5 108 38.0
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.6e-13 80.1 124 34.7
Nitab4.5_0019209g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-13 79.3 128 31.2
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 3.5e-13 79.0 195 26.2
Nitab4.5_0000119g0230 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.6e-13 78.6 104 41.3
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-12 77.4 165 27.9
CAN.G165.12 Capsicum annuum HOM05D002261 ORTHO05D002334 1.3e-12 77.0 122 33.6
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 5.1e-12 75.1 122 32.8
Nitab4.5_0000600g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-12 75.1 102 37.3
Nitab4.5_0004225g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-12 75.1 126 31.7
CAN.G315.4 Capsicum annuum HOM05D000541 ORTHO05D000137 6.6e-12 74.7 115 33.9
Nitab4.5_0002588g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.6e-12 74.7 138 35.5
PGSC0003DMG400025489 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-11 73.6 45 68.9
Sopen05g027490 Solanum pennellii HOM05D002261 ORTHO05D002334 2.5e-11 72.8 109 36.7
Nitab4.5_0000941g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.3e-11 72.0 128 30.5
Nitab4.5_0005023g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.3e-11 72.0 49 61.2
Nitab4.5_0005917g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.3e-11 71.2 99 38.4
Nitab4.5_0009613g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.5e-11 70.9 109 32.1
Nitab4.5_0004688g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-10 70.5 95 40.0
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 1.6e-10 70.1 104 36.5
Nitab4.5_0000605g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.1e-10 69.7 95 37.9
Peaxi162Scf00044g00014 Petunia axillaris HOM05D002261 ORTHO05D002334 2.1e-10 69.7 77 42.9
Nitab4.5_0012627g0010 Nicotiana tabacum HOM05D002261 ORTHO05D049374 2.8e-10 69.3 90 37.8
Nitab4.5_0004260g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-10 68.9 97 35.1
Nitab4.5_0016697g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-10 68.9 97 37.1
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 3.6e-10 68.9 84 40.5
Nitab4.5_0014025g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.7e-10 68.6 94 39.4
Peaxi162Scf00586g00013 Petunia axillaris HOM05D002261 ORTHO05D002334 4.7e-10 68.6 101 35.6
CAN.G170.120 Capsicum annuum HOM05D002261 ORTHO05D002334 6.2e-10 68.2 66 40.9
Nitab4.5_0000113g0330 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.1e-10 67.8 108 31.5
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.1e-10 67.8 81 40.7
Sopen07g011000 Solanum pennellii HOM05D000004 ORTHO05D002334 1.8e-09 66.6 81 38.3
Peaxi162Scf00102g00014 Petunia axillaris HOM05D056814 ORTHO05D002334 4.0e-09 65.5 89 37.1
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 4.0e-09 65.5 64 43.8
Sopen07g022080 Solanum pennellii HOM05D002261 ORTHO05D002334 4.0e-09 65.5 99 35.4
Nitab4.5_0000659g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-09 65.1 57 47.4
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 6.8e-09 64.7 101 35.6
CAN.G135.43 Capsicum annuum HOM05D002261 ORTHO05D002334 8.9e-09 64.3 65 43.1
Nitab4.5_0011225g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-08 63.5 91 35.2
Peaxi162Scf00371g00312 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-08 63.5 64 43.8
Nitab4.5_0000842g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-08 62.4 61 44.3
Nitab4.5_0009745g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-08 62.4 91 35.2
Peaxi162Scf07758g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 3.4e-08 62.4 57 45.6
Nitab4.5_0000616g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.4e-08 62.0 103 31.1
Nitab4.5_0004247g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.4e-08 62.0 108 31.5
Nitab4.5_0009754g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.4e-08 62.0 63 42.9
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.6e-08 61.2 55 45.5
Sopen01g022130 Solanum pennellii HOM05D002261 ORTHO05D002334 7.6e-08 61.2 87 35.6
Nitab4.5_0000402g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.9e-08 60.8 56 48.2
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.8e-07 58.9 111 28.8
Nitab4.5_0007441g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.9e-07 58.5 88 36.4
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 6.4e-07 58.2 142 23.2
Nitab4.5_0001659g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.4e-07 58.2 62 43.5
PGSC0003DMG400013166 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.4e-07 58.2 94 36.2
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.4e-07 58.2 61 45.9
Nitab4.5_0002427g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.4e-07 57.8 70 40.0
CAN.G255.16 Capsicum annuum HOM05D002261 ORTHO05D002334 1.4e-06 57.0 108 29.6
Nitab4.5_0009976g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.9e-06 56.6 56 46.4
Peaxi162Scf00752g00610 Petunia axillaris HOM05D002261 ORTHO05D002334 1.9e-06 56.6 73 42.5
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 2.4e-06 56.2 145 24.8
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.2e-06 55.8 81 34.6
Nitab4.5_0019514g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.4e-06 55.1 79 39.2
Peaxi162Scf00028g00075 Petunia axillaris HOM05D002261 ORTHO05D002334 5.4e-06 55.1 66 42.4
Peaxi162Scf00951g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 5.4e-06 55.1 64 39.1
Nitab4.5_0022906g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.1e-06 54.7 72 40.3
Solyc04g025320.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.1e-06 54.7 67 40.3
Nitab4.5_0000578g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.2e-06 54.3 99 35.4
Nitab4.5_0005624g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.2e-06 54.3 75 40.0
Peaxi162Scf00047g00443 Petunia axillaris HOM05D002261 ORTHO05D002334 9.2e-06 54.3 52 48.1
Peaxi162Scf00206g00046 Petunia axillaris HOM05D002261 ORTHO05D002334 9.2e-06 54.3 56 44.6
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 9.2e-06 54.3 59 40.7


User provided reference genes

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