Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g065445.1 Solanum lycopersicum HOM05D001566 ORTHO05D390895 1.9e-40 168.7 82 100.0
Sopen06g023930 Solanum pennellii HOM05D001566 ORTHO05D001449 3.8e-17 91.3 47 93.6
PGSC0003DMG400026081 Solanum tuberosum HOM05D001566 ORTHO05D001449 1.4e-16 89.4 47 91.5
Nitab4.5_0000303g0050 Nicotiana tabacum HOM05D001566 ORTHO05D001449 2.0e-10 68.9 47 72.3
Nitab4.5_0004461g0030 Nicotiana tabacum HOM05D001566 ORTHO05D001449 7.6e-10 67.0 47 70.2
Solyc11g017140.3 Solanum lycopersicum HOM05D001566 ORTHO05D001449 1.6e-07 59.3 45 60.0
Sopen11g009090 Solanum pennellii HOM05D001566 ORTHO05D001449 1.6e-07 59.3 45 60.0
MD05G1040600 Malus domestica HOM05D001566 ORTHO05D001449 4.6e-07 57.8 46 58.7
Manes.18G099800 Manihot esculenta HOM05D001566 ORTHO05D001449 4.6e-07 57.8 47 55.3
Nitab4.5_0000159g0180 Nicotiana tabacum HOM05D001566 ORTHO05D001449 4.6e-07 57.8 46 54.3
Nitab4.5_0009001g0020 Nicotiana tabacum HOM05D001566 ORTHO05D001449 4.6e-07 57.8 46 54.3
PGSC0003DMG400009234 Solanum tuberosum HOM05D001566 ORTHO05D001449 7.9e-07 57.0 45 55.6
Duzib211G0245 Durio zibethinus HOM05D001566 ORTHO05D001449 1.0e-06 56.6 47 53.2
Lj5g0009410 Lotus japonicus HOM05D001566 ORTHO05D001449 1.0e-06 56.6 47 59.6
Thecc.08G202300 Theobroma cacao HOM05D001566 ORTHO05D001449 1.0e-06 56.6 47 53.2
CSS0009013 Camellia sinensis var. sinensis HOM05D001566 ORTHO05D001449 1.8e-06 55.8 47 51.1
Psat6g185920 Pisum sativum HOM05D001566 ORTHO05D001449 1.8e-06 55.8 46 58.7
COL.COLO4_29963 Corchorus olitorius HOM05D001566 ORTHO05D001449 2.3e-06 55.5 47 51.1
FAN20G2438 Fragaria x ananassa HOM05D001566 ORTHO05D001449 2.3e-06 55.5 46 54.3
FAN27G1873 Fragaria x ananassa HOM05D001566 ORTHO05D001449 2.3e-06 55.5 46 54.3
RcHm_v2.0_Chr6g0272161 Rosa chinensis HOM05D001566 ORTHO05D001449 2.3e-06 55.5 46 54.3
TPR.G1804 Trifolium pratense HOM05D001566 ORTHO05D001449 3.0e-06 55.1 47 55.3
Ciclev10000850m.g Citrus clementina HOM05D001566 ORTHO05D001449 3.9e-06 54.7 46 50.0
Phvul.007G090500 Phaseolus vulgaris HOM05D001566 ORTHO05D001449 3.9e-06 54.7 47 55.3
VMungo0720G2118 Vigna mungo HOM05D001566 ORTHO05D001449 3.9e-06 54.7 47 55.3
Prupe.8G055100 Prunus persica HOM05D001566 ORTHO05D001449 5.1e-06 54.3 46 54.3
CSS0026087 Camellia sinensis var. sinensis HOM05D001566 ORTHO05D001449 6.7e-06 53.9 47 51.1
FvH4_2g12260 Fragaria vesca HOM05D001566 ORTHO05D001449 8.7e-06 53.5 46 52.2
FAN24G2435 Fragaria x ananassa HOM05D001566 ORTHO05D001449 8.7e-06 53.5 46 52.2


User provided reference genes

Program Settings