Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 4.2e-223 777.7 394 100.0
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 4.2e-223 777.7 394 100.0
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 5.2e-221 770.8 394 98.7
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 6.8e-205 717.2 395 89.6
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 8.0e-198 693.7 400 88.5
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.4e-165 586.6 393 78.6
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 3.4e-156 555.4 413 68.8
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 8.4e-155 550.8 407 68.3
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 8.4e-155 550.8 396 72.7
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 6.0e-153 544.7 412 68.0
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.0e-152 543.9 403 68.7
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 1.0e-152 543.9 400 70.2
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 3.9e-152 542.0 424 67.2
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 5.1e-152 541.6 402 69.4
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 6.6e-152 541.2 410 68.0
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 3.3e-151 538.9 403 69.0
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 4.3e-151 538.5 402 69.2
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 4.3e-151 538.5 414 66.4
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 7.3e-151 537.7 411 67.6
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.3e-150 537.0 400 70.0
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.3e-150 537.0 402 66.7
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 1.6e-150 536.6 410 66.8
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.6e-150 536.6 413 67.1
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.6e-150 536.6 395 69.6
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 2.8e-150 535.8 410 66.6
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 3.6e-150 535.4 410 66.6
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 8.1e-150 534.3 415 67.2
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.8e-149 533.1 419 65.4
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 2.4e-149 532.7 400 70.0
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 4.0e-149 531.9 415 67.0
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 6.9e-149 531.2 416 67.5
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 6.9e-149 531.2 414 66.4
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 9.0e-149 530.8 417 68.6
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 9.0e-149 530.8 416 64.2
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 9.0e-149 530.8 398 67.1
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.5e-148 530.0 409 65.8
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.5e-148 530.0 420 67.6
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 2.0e-148 529.6 409 65.5
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 3.4e-148 528.9 413 65.6
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 4.5e-148 528.5 413 66.3
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 7.6e-148 527.7 415 66.7
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 1.3e-147 526.9 397 66.8
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 1.3e-147 526.9 397 70.0
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 8.4e-147 524.2 418 67.0
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 8.4e-147 524.2 416 66.6
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 1.1e-146 523.9 418 65.3
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 1.4e-146 523.5 402 68.7
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.4e-146 523.5 418 64.6
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.4e-146 523.5 400 66.0
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 4.2e-146 521.9 415 63.1
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 4.2e-146 521.9 421 64.6
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 5.4e-146 521.5 418 66.7
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 1.6e-145 520.0 417 66.4
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 1.6e-145 520.0 398 67.1
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 1.6e-145 520.0 415 66.5
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 3.5e-145 518.8 438 63.2
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 4.6e-145 518.5 417 66.4
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 4.6e-145 518.5 415 66.0
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 7.9e-145 517.7 410 65.4
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 7.9e-145 517.7 416 65.1
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 7.9e-145 517.7 411 65.2
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 1.0e-144 517.3 420 62.6
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 1.0e-144 517.3 416 65.4
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.3e-144 516.9 416 65.4
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 2.3e-144 516.2 418 64.1
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 2.3e-144 516.2 401 65.8
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 3.0e-144 515.8 397 64.7
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 3.7e-142 508.8 417 64.0
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 3.7e-142 508.8 401 65.8
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 4.8e-142 508.4 401 66.1
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 2.4e-141 506.1 414 66.4
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 2.4e-141 506.1 414 66.4
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 2.4e-141 506.1 414 66.4
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 5.3e-141 505.0 408 63.5
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 6.9e-141 504.6 418 65.8
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.2e-140 503.8 416 65.4
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 9.9e-140 500.7 415 63.1
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 1.1e-138 497.3 414 65.2
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.4e-138 496.1 415 62.4
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.9e-135 486.5 411 61.8
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 7.4e-135 484.6 397 66.0
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 2.8e-134 482.6 405 62.2
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 4.8e-134 481.9 416 61.5
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 5.3e-133 478.4 408 62.7
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 6.9e-133 478.0 385 65.7
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 1.7e-131 473.4 396 63.6
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.5e-130 468.4 394 62.7
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 1.6e-129 466.8 393 62.1
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 2.1e-129 466.5 375 64.5
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 3.0e-128 462.6 412 61.2
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.0e-128 462.6 415 60.5
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 8.7e-128 461.1 416 59.9
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.3e-126 457.2 398 63.3
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 2.3e-120 436.4 477 51.4
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 1.2e-116 424.1 363 64.5
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 2.2e-110 403.3 251 80.1
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 2.1e-105 386.7 267 73.0
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 6.3e-102 375.2 463 44.9
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.9e-98 363.6 255 72.5
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 1.5e-95 354.0 230 74.8
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 5.9e-92 342.0 418 46.9
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 5.0e-91 339.0 465 41.7
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 8.0e-89 331.6 245 69.4
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.7e-87 325.5 245 69.0
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 3.5e-84 316.2 410 45.6
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 2.8e-81 306.6 468 40.6
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.8e-72 277.3 426 39.9
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 1.9e-66 257.3 268 53.7
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 7.0e-61 238.8 182 65.9
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.7e-44 183.7 168 60.1
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 4.3e-42 176.4 163 50.9
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 9.6e-34 148.7 190 47.4
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 6.2e-33 146.0 467 27.4
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 4.0e-32 143.3 487 24.6
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 3.3e-26 123.6 109 56.0
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 2.6e-23 114.0 151 48.3
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 1.3e-22 111.7 447 25.7
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 4.9e-22 109.8 98 60.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.4e-21 108.2 70 75.7
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 2.3e-11 74.3 105 41.0


User provided reference genes

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