Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g036670.2 Solanum lycopersicum HOM05D005234 ORTHO05D006583 4.1e-122 441.4 224 100.0
Sopen06g012740 Solanum pennellii HOM05D005234 ORTHO05D006583 8.6e-64 247.7 137 93.4
Nitab4.5_0000271g0220 Nicotiana tabacum HOM05D005234 ORTHO05D006583 1.1e-47 194.1 140 74.3
Peaxi162Scf00629g00122 Petunia axillaris HOM05D005234 ORTHO05D006583 9.0e-45 184.5 140 72.9
Lj8A92T86 Lonicera japonica HOM05D005234 ORTHO05D006583 3.2e-42 176.0 148 61.5
Dinv31388 Davidia involucrata HOM05D005234 ORTHO05D006583 3.6e-38 162.5 127 64.6
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 3.1e-37 159.5 152 55.9
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 3.4e-36 156.0 133 58.6
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 7.6e-36 154.8 133 58.6
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 1.7e-35 153.7 127 60.6
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 4.9e-35 152.1 137 55.5
Manes.07G106500 Manihot esculenta HOM05D005234 ORTHO05D006583 1.9e-34 150.2 137 53.3
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 4.2e-34 149.1 125 58.4
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 2.1e-33 146.7 125 57.6
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 2.7e-33 146.4 118 61.9
Potri.008G047400 Populus trichocarpa HOM05D005234 ORTHO05D006583 1.0e-32 144.4 136 52.9
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 1.0e-32 144.4 142 48.6
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 1.8e-32 143.7 136 53.7
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 3.9e-32 142.5 125 56.0
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 3.9e-32 142.5 127 59.1
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 3.9e-32 142.5 137 52.6
QL08p057492 Quercus lobata HOM05D005234 ORTHO05D006583 1.1e-31 141.0 125 56.0
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 1.5e-31 140.6 137 52.6
RcHm_v2.0_Chr1g0364981 Rosa chinensis HOM05D005234 ORTHO05D006583 1.9e-31 140.2 125 54.4
AL5G36200 Arabidopsis lyrata HOM05D005234 ORTHO05D006583 7.4e-31 138.3 130 51.5
Ciclev10032643m.g Citrus clementina HOM05D005234 ORTHO05D006583 7.4e-31 138.3 140 50.7
Aa31LG10G10060 Aethionema arabicum HOM05D005234 ORTHO05D006583 9.6e-31 137.9 130 50.0
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 9.6e-31 137.9 131 48.9
BcaB01g00128 Brassica carinata HOM05D005234 ORTHO05D006583 1.3e-30 137.5 131 49.6
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 1.3e-30 137.5 131 51.9
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 1.6e-30 137.1 134 51.5
Aqoxy4G03097 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 2.1e-30 136.7 157 44.6
Hma1.2p1_0348F.1_g131710 Hydrangea macrophylla HOM05D005234 ORTHO05D006583 2.1e-30 136.7 108 61.1
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 2.8e-30 136.3 131 51.1
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 2.8e-30 136.3 127 52.0
TWI63G0851 Tripterygium wilfordii HOM05D005234 ORTHO05D006583 2.8e-30 136.3 125 52.8
Carub.0005s2171 Capsella rubella HOM05D005234 ORTHO05D006583 1.1e-29 134.4 125 53.6
FAN06G4140 Fragaria x ananassa HOM05D005234 ORTHO05D006583 2.4e-29 133.3 125 52.8
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 5.3e-29 132.1 127 52.8
CARHR165100 Cardamine hirsuta HOM05D005234 ORTHO05D006583 6.9e-29 131.7 137 48.2
FAN06G4823 Fragaria x ananassa HOM05D005234 ORTHO05D006583 6.9e-29 131.7 125 52.0
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 6.9e-29 131.7 131 49.6
FAN01G2148 Fragaria x ananassa HOM05D005234 ORTHO05D006583 9.0e-29 131.3 125 53.6
FAN01G2697 Fragaria x ananassa HOM05D005234 ORTHO05D006583 9.0e-29 131.3 125 53.6
Nitab4.5_0006265g0070 Nicotiana tabacum HOM05D005234 ORTHO05D006583 9.0e-29 131.3 136 57.4
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 1.2e-28 131.0 127 48.8
AT3G55080 Arabidopsis thaliana HOM05D005234 ORTHO05D006583 2.0e-28 130.2 126 50.0
Sp5g07340 Schrenkiella parvula HOM05D005234 ORTHO05D006583 1.7e-27 127.1 131 46.6
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 1.7e-27 127.1 126 50.8
AUR62025541 Chenopodium quinoa HOM05D005234 ORTHO05D006583 2.9e-27 126.3 127 50.4
AUR62042662 Chenopodium quinoa HOM05D005234 ORTHO05D006583 4.9e-27 125.6 125 52.0
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 4.9e-27 125.6 130 47.7
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 8.4e-27 124.8 126 54.0
PGR044G0090 Punica granatum HOM05D005234 ORTHO05D006583 8.4e-27 124.8 125 52.0
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 1.1e-26 124.4 126 50.0
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 1.1e-26 124.4 149 45.0
SEGI_06338 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 1.1e-26 124.4 135 48.9
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 1.4e-26 124.0 127 50.4
Thhalv10010346m.g Eutrema salsugineum HOM05D005234 ORTHO05D006583 1.9e-26 123.6 130 45.4
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 2.5e-26 123.2 131 47.3
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 2.5e-26 123.2 131 47.3
BolC8t50657H Brassica oleracea HOM05D005234 ORTHO05D006583 2.5e-26 123.2 130 47.7
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 7.1e-26 121.7 135 47.4
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 2.1e-25 120.2 131 47.3
Migut.A00396 Erythranthe guttata HOM05D005234 ORTHO05D006583 2.7e-25 119.8 145 46.9
Sed0019162 Sechium edule HOM05D005234 ORTHO05D006583 1.3e-24 117.5 126 47.6
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 1.8e-24 117.1 126 47.6
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 2.3e-24 116.7 125 47.2
Hund06032 Selenicereus undatus HOM05D005234 ORTHO05D006583 3.9e-24 115.9 134 44.8
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 5.1e-24 115.5 135 43.7
Lalb_Chr06g0164091 Lupinus albus HOM05D005234 ORTHO05D006583 6.7e-24 115.2 128 47.7
Eucgr.J01148 Eucalyptus grandis HOM05D005234 ORTHO05D006583 1.1e-23 114.4 130 47.7
VMungo0720G1519 Vigna mungo HOM05D005234 ORTHO05D006583 1.1e-23 114.4 126 46.8
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 2.5e-23 113.2 133 43.6
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 3.3e-23 112.8 125 46.4
Phvul.007G007800 Phaseolus vulgaris HOM05D005234 ORTHO05D006583 4.3e-23 112.5 126 45.2
ATR0827G035 Amborella trichopoda HOM05D005234 ORTHO05D006583 1.3e-22 110.9 117 48.7
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 1.3e-22 110.9 127 45.7
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 1.3e-22 110.9 165 34.5
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 4.8e-22 109.0 125 45.6
BraA09t40265Z Brassica rapa HOM05D005234 ORTHO05D006583 6.3e-22 108.6 146 41.8
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 1.1e-21 107.8 142 39.4
BolC8t50642H Brassica oleracea HOM05D005234 ORTHO05D006583 6.9e-21 105.1 144 40.3
BolC8t50645H Brassica oleracea HOM05D005234 ORTHO05D006583 6.9e-21 105.1 144 40.3
BolC8t50648H Brassica oleracea HOM05D005234 ORTHO05D006583 6.9e-21 105.1 144 40.3
Atru.chr12.596 Acer truncatum HOM05D005234 ORTHO05D006583 2.0e-20 103.6 87 55.2
BcaC07g39828 Brassica carinata HOM05D005234 ORTHO05D006583 4.5e-20 102.4 144 39.6
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 3.8e-19 99.4 162 34.0
Sc09g0006880 Simmondsia chinensis HOM05D005234 ORTHO05D006583 9.3e-18 94.7 105 45.7
unitig_26.g8857 Utricularia gibba HOM05D005234 ORTHO05D006583 2.1e-17 93.6 128 39.8
FAN03G0311 Fragaria x ananassa HOM05D002912 ORTHO05D003191 1.5e-15 87.4 79 55.7
SMO141G0013 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 4.3e-15 85.9 127 36.2
Pp3c19_10210 Physcomitrium patens HOM05D005234 ORTHO05D006583 5.3e-13 79.0 180 30.0
A09p32550 Brassica napus HOM05D005234 ORTHO05D006583 1.6e-09 67.4 132 33.3
FAN10G0581 Fragaria x ananassa HOM05D005234 ORTHO05D006583 3.6e-09 66.2 71 47.9
SMO367G0191 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 3.9e-08 62.8 153 26.1
vmacro07107 Vaccinium macrocarpon HOM05D005234 ORTHO05D006583 3.9e-08 62.8 46 67.4
SMO348G0083 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 8.8e-08 61.6 125 31.2
MD01G1117100 Malus domestica HOM05D005234 ORTHO05D006583 4.4e-07 59.3 60 55.0
BraA09t38797Z Brassica rapa HOM05D005234 ORTHO05D006583 9.7e-07 58.2 71 45.1


User provided reference genes

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