Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 1.1e-179 633.3 327 100.0
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 1.3e-177 626.3 327 98.5
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.1e-167 592.4 327 94.5
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 2.1e-167 592.4 327 94.5
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.2e-162 576.6 326 89.6
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.0e-142 508.8 297 88.2
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 6.3e-132 474.6 319 75.9
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 1.1e-128 463.8 269 85.1
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 8.9e-126 454.1 318 70.1
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.4e-123 446.8 317 69.4
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 9.2e-123 444.1 319 69.6
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 2.7e-122 442.6 321 68.2
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 5.9e-122 441.4 312 70.5
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.5e-120 436.0 317 66.9
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 2.1e-119 433.0 319 69.0
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 3.1e-118 429.1 322 66.5
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 6.8e-118 427.9 325 64.9
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 8.9e-118 427.6 302 70.2
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.5e-117 426.8 320 66.9
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.6e-117 426.0 319 65.2
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 4.4e-117 425.2 324 65.1
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 4.4e-117 425.2 320 66.2
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 9.8e-117 424.1 320 65.9
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.7e-116 423.3 236 91.5
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 2.2e-116 422.9 324 63.9
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 3.7e-116 422.2 322 65.2
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 6.4e-116 421.4 321 64.8
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.1e-115 420.6 320 65.9
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.9e-115 419.9 326 64.1
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 3.2e-115 419.1 324 64.2
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.1e-115 418.7 319 64.6
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 5.4e-115 418.3 321 65.4
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 9.2e-115 417.5 318 64.8
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.6e-114 416.8 320 66.2
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 3.5e-114 415.6 330 63.3
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 3.5e-114 415.6 326 63.8
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 3.5e-114 415.6 321 62.9
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.6e-114 415.2 330 63.3
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 4.6e-114 415.2 320 65.3
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 6.0e-114 414.8 315 66.3
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 7.8e-114 414.5 325 64.0
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.0e-113 414.1 330 63.0
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.7e-113 413.3 330 63.3
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 3.0e-113 412.5 325 63.4
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.0e-113 412.5 330 63.0
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 3.9e-113 412.1 325 63.7
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 5.0e-113 411.8 322 65.2
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.5e-112 410.2 325 63.4
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.9e-112 409.8 330 63.0
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.9e-112 409.8 324 63.0
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 7.3e-112 407.9 323 62.8
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 7.3e-112 407.9 325 63.4
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 7.3e-112 407.9 322 63.4
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 2.8e-111 406.0 320 64.7
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.2e-111 404.8 320 63.1
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-110 404.1 319 61.1
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.8e-110 403.3 321 61.1
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.8e-110 403.3 321 61.1
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 2.3e-110 402.9 318 60.7
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 4.0e-110 402.1 319 60.5
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 5.2e-110 401.7 319 60.8
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 4.4e-109 398.7 321 62.9
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 5.8e-109 398.3 319 60.5
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 1.3e-108 397.1 317 63.7
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 2.2e-108 396.4 323 62.2
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 2.9e-108 396.0 318 60.4
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 8.3e-108 394.4 323 59.8
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 2.4e-107 392.9 323 63.2
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 4.1e-107 392.1 324 60.8
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 9.2e-107 391.0 320 58.8
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.6e-106 390.2 321 60.1
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 2.1e-106 389.8 305 61.6
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 2.1e-106 389.8 318 62.9
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.7e-106 389.4 317 59.3
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 2.7e-106 389.4 318 60.7
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 4.6e-106 388.7 318 58.2
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 1.7e-105 386.7 329 60.8
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 2.3e-105 386.3 316 61.7
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 8.6e-105 384.4 328 62.2
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.1e-104 384.0 320 58.4
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.1e-104 384.0 303 61.7
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 4.3e-104 382.1 317 59.0
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.6e-103 379.0 317 60.6
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 1.1e-102 377.5 316 59.8
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.5e-101 373.6 320 60.3
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 1.9e-99 366.7 318 58.5
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.4e-99 366.3 265 69.1
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 5.8e-93 345.1 265 64.5
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 2.6e-85 319.7 324 53.1
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 6.0e-82 308.5 320 53.4
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.5e-80 303.9 332 50.9
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 5.3e-78 295.4 282 58.2
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 3.8e-76 289.3 328 49.1
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.6e-74 283.9 325 48.9
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 4.6e-74 282.3 316 48.1
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.8e-68 262.7 202 67.3
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 3.2e-67 259.6 231 58.9
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.2e-67 259.6 320 47.5
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 4.2e-67 259.2 325 44.6
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 2.3e-65 253.4 187 64.2
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 3.9e-57 226.1 176 61.9
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.9e-56 223.8 200 58.5
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 7.4e-56 221.9 161 67.7
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.5e-45 187.6 255 43.5
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.5e-37 159.5 109 69.7
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 4.5e-37 159.5 109 69.7
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.0e-28 131.7 86 72.1
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 2.7e-26 123.6 266 28.6
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.5e-19 101.3 120 45.8
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 1.0e-17 95.1 80 56.2
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 9.1e-14 82.0 264 31.4
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 9.8e-08 62.0 79 50.6


User provided reference genes

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