Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g009250.2 Solanum lycopersicum HOM05D002077 ORTHO05D000818 2.5e-74 282.0 136 100.0
PGSC0003DMG401014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 5.0e-22 108.2 73 74.0
Solyc03g025940.3 Solanum lycopersicum HOM05D002077 ORTHO05D000818 3.1e-16 89.0 74 60.8
Solyc03g026410.3 Solanum lycopersicum HOM05D002077 ORTHO05D000818 6.9e-16 87.8 105 52.4
PGSC0003DMG400014329 Solanum tuberosum HOM05D002077 ORTHO05D000818 9.1e-16 87.4 73 61.6
Sopen03g004750 Solanum pennellii HOM05D002077 ORTHO05D000818 1.2e-15 87.0 73 61.6
Solyc03g025930.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 1.5e-15 86.7 73 61.6
PGSC0003DMG400030222 Solanum tuberosum HOM05D002077 ORTHO05D000818 3.4e-15 85.5 74 59.5
Sopen03g004760 Solanum pennellii HOM05D002077 ORTHO05D000818 5.9e-15 84.7 74 58.1
Solyc03g062810.1 Solanum lycopersicum HOM05D002077 ORTHO05D000818 2.9e-14 82.4 60 63.3
PGSC0003DMG402014331 Solanum tuberosum HOM05D002077 ORTHO05D000818 6.5e-14 81.3 60 68.3
PGSC0003DMG400043692 Solanum tuberosum HOM05D002077 ORTHO05D000818 4.2e-13 78.6 74 54.1
PGSC0003DMG400016751 Solanum tuberosum HOM05D002077 ORTHO05D000818 2.7e-12 75.9 73 56.2
Manes.06G146400 Manihot esculenta HOM05D002077 ORTHO05D000818 1.1e-10 70.5 60 58.3
COL.COLO4_14296 Corchorus olitorius HOM05D002077 ORTHO05D000818 1.5e-10 70.1 59 57.6
Phvul.007G069000 Phaseolus vulgaris HOM05D002077 ORTHO05D000818 1.5e-10 70.1 60 55.0
vmacro06694 Vaccinium macrocarpon HOM05D002077 ORTHO05D000818 2.0e-10 69.7 60 55.0
Dinv28453 Davidia involucrata HOM05D002077 ORTHO05D000818 2.6e-10 69.3 60 56.7
CiPaw.03G105400 Carya illinoinensis HOM05D002077 ORTHO05D000818 3.3e-10 68.9 60 53.3
Glyma.20G157500 Glycine max HOM05D002077 ORTHO05D000818 3.3e-10 68.9 60 55.0
Prupe.2G293200 Prunus persica HOM05D002077 ORTHO05D000818 3.3e-10 68.9 60 53.3
Rhsim03G0179600 Rhododendron simsii HOM05D002077 ORTHO05D000818 3.3e-10 68.9 60 55.0
Actinidia34102 Actinidia chinensis HOM05D002077 ORTHO05D000818 9.7e-10 67.4 60 55.0
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 9.7e-10 67.4 60 55.0
TPR.G14327 Trifolium pratense HOM05D002077 ORTHO05D000818 9.7e-10 67.4 60 55.0
arahy.Tifrunner.gnm1.ann1.6H6H67 Arachis hypogaea HOM05D002077 ORTHO05D000818 1.3e-09 67.0 60 55.0
arahy.Tifrunner.gnm1.ann1.KCRD8X Arachis hypogaea HOM05D002077 ORTHO05D000818 1.3e-09 67.0 60 55.0
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 1.3e-09 67.0 60 55.0
Hma1.2p1_2482F.1_g323020 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 1.7e-09 66.6 60 51.7
Nitab4.5_0003365g0050 Nicotiana tabacum HOM05D002077 ORTHO05D000818 1.7e-09 66.6 65 50.8
TAR636G1697 Trochodendron aralioides HOM05D002077 ORTHO05D000818 1.7e-09 66.6 60 46.7
Gohir.A09G041000 Gossypium hirsutum HOM05D002077 ORTHO05D000818 2.2e-09 66.2 60 50.0
Nn1g01424 Nelumbo nucifera HOM05D002077 ORTHO05D000818 2.2e-09 66.2 60 46.7
Gohir.D09G041900 Gossypium hirsutum HOM05D002077 ORTHO05D000818 2.8e-09 65.9 60 50.0
Gorai.006G048100 Gossypium raimondii HOM05D002077 ORTHO05D000818 2.8e-09 65.9 60 50.0
VMungo0720G0161 Vigna mungo HOM05D002077 ORTHO05D000818 2.8e-09 65.9 61 54.1
TWI14G1216 Tripterygium wilfordii HOM05D002077 ORTHO05D000818 3.7e-09 65.5 60 53.3
Aqoxy5G03957 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 4.8e-09 65.1 60 43.3
Ciclev10005501m.g Citrus clementina HOM05D002077 ORTHO05D000818 4.8e-09 65.1 60 53.3
Lalb_Chr06g0161071 Lupinus albus HOM05D002077 ORTHO05D000818 4.8e-09 65.1 60 53.3
Cc02_g03120 Coffea canephora HOM05D002077 ORTHO05D000818 6.3e-09 64.7 60 53.3
QL09p014520 Quercus lobata HOM05D002077 ORTHO05D000818 6.3e-09 64.7 60 51.7
Atru.chr1.476 Acer truncatum HOM05D002077 ORTHO05D000818 8.2e-09 64.3 60 53.3
Cpa.g.sc107.40 Carica papaya HOM05D002077 ORTHO05D000818 8.2e-09 64.3 60 55.0
Eucgr.A02798 Eucalyptus grandis HOM05D002077 ORTHO05D000818 8.2e-09 64.3 60 50.0
FvH4_7g29350 Fragaria vesca HOM05D002077 ORTHO05D000818 8.2e-09 64.3 60 51.7
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 8.2e-09 64.3 60 51.7
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 8.2e-09 64.3 60 51.7
Hma1.2p1_3140F.1_g333050 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 8.2e-09 64.3 60 48.3
Lj5g0027705 Lotus japonicus HOM05D002077 ORTHO05D000818 8.2e-09 64.3 60 50.0
Thecc.03G175300 Theobroma cacao HOM05D002077 ORTHO05D000818 8.2e-09 64.3 60 50.0
Glyma.10G236900 Glycine max HOM05D002077 ORTHO05D000818 1.1e-08 63.9 60 55.0
Hma1.2p1_2094F.1_g313920 Hydrangea macrophylla HOM05D002077 ORTHO05D000818 1.1e-08 63.9 60 48.3
PSO063G0361 Papaver somniferum HOM05D002077 ORTHO05D000818 1.1e-08 63.9 60 46.7
PSO782G4919 Papaver somniferum HOM05D002077 ORTHO05D000818 1.1e-08 63.9 60 46.7
Solyc03g025920.4 Solanum lycopersicum HOM05D002077 ORTHO05D000818 1.1e-08 63.9 60 55.0
Sopen03g004730 Solanum pennellii HOM05D002077 ORTHO05D000818 1.1e-08 63.9 60 55.0
PGSC0003DMG403014333 Solanum tuberosum HOM05D002077 ORTHO05D000818 1.1e-08 63.9 60 55.0
Ca_10779_v3 Cicer arietinum L. HOM05D002077 ORTHO05D000818 1.4e-08 63.5 60 51.7
Medtr1g100697 Medicago truncatula HOM05D002077 ORTHO05D000818 1.4e-08 63.5 60 51.7
RcHm_v2.0_Chr1g0377111 Rosa chinensis HOM05D002077 ORTHO05D000818 1.4e-08 63.5 60 51.7
Peaxi162Scf00915g00025 Petunia axillaris HOM05D002077 ORTHO05D000818 2.4e-08 62.8 60 51.7
GSVIVG01010544001 Vitis vinifera HOM05D002077 ORTHO05D000818 3.1e-08 62.4 60 50.0
Medtr1g100707 Medicago truncatula HOM05D002077 ORTHO05D000818 4.1e-08 62.0 60 51.7
AL5G28390 Arabidopsis lyrata HOM05D002077 ORTHO05D000818 5.3e-08 61.6 57 50.9
Carub.0005s1505 Capsella rubella HOM05D002077 ORTHO05D000818 5.3e-08 61.6 57 50.9
Thhalv10010519m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 5.3e-08 61.6 57 50.9
Nitab4.5_0000716g0180 Nicotiana tabacum HOM05D002077 ORTHO05D000818 5.3e-08 61.6 60 51.7
CAN.G913.3 Capsicum annuum HOM05D002077 ORTHO05D000818 7.0e-08 61.2 60 53.3
Duzib205G0590 Durio zibethinus HOM05D002077 ORTHO05D000818 7.0e-08 61.2 52 51.9
Solyc01g015180.1 Solanum lycopersicum HOM05D002077 ORTHO05D000818 7.0e-08 61.2 73 49.3
THA.LOC104824394 Tarenaya hassleriana HOM05D002077 ORTHO05D000818 9.1e-08 60.8 67 47.8
Psat6g199880 Pisum sativum HOM05D002077 ORTHO05D000818 1.2e-07 60.5 60 48.3
AT3G48880 Arabidopsis thaliana HOM05D002077 ORTHO05D000818 1.5e-07 60.1 57 49.1
Eucgr.A02799 Eucalyptus grandis HOM05D002077 ORTHO05D000818 1.5e-07 60.1 60 48.3
Cfa008309 Carpinus fangiana HOM05D002077 ORTHO05D000818 2.0e-07 59.7 60 51.7
Dinv35206 Davidia involucrata HOM05D002077 ORTHO05D000818 2.0e-07 59.7 64 45.3
BcaC09g49912 Brassica carinata HOM05D002077 ORTHO05D000818 2.6e-07 59.3 55 49.1
A01p25170 Brassica napus HOM05D002077 ORTHO05D000818 2.6e-07 59.3 55 49.1
C01p31370 Brassica napus HOM05D002077 ORTHO05D000818 2.6e-07 59.3 55 49.1
BolC1t03074H Brassica oleracea HOM05D002077 ORTHO05D000818 2.6e-07 59.3 55 49.1
BraA01t02425Z Brassica rapa HOM05D002077 ORTHO05D000818 2.6e-07 59.3 55 49.1
CARHR157690 Cardamine hirsuta HOM05D002077 ORTHO05D000818 2.6e-07 59.3 57 49.1
Aa31LG4G17390 Aethionema arabicum HOM05D002077 ORTHO05D000818 3.4e-07 58.9 50 52.0
Sp5g13170 Schrenkiella parvula HOM05D002077 ORTHO05D000818 3.4e-07 58.9 57 49.1
BcaB05g22980 Brassica carinata HOM05D002077 ORTHO05D000818 4.5e-07 58.5 55 49.1
BcaC07g39363 Brassica carinata HOM05D002077 ORTHO05D000818 4.5e-07 58.5 67 49.3
Haze_13726 Corylus avellana HOM05D002077 ORTHO05D000818 4.5e-07 58.5 60 50.0
MBI18_g44743_MAGBIO Magnolia biondii HOM05D002077 ORTHO05D000818 5.9e-07 58.2 60 45.0
Potri.012G137700 Populus trichocarpa HOM05D002077 ORTHO05D000818 5.9e-07 58.2 65 46.2
Sabra15G0150400 Salix brachista HOM05D002077 ORTHO05D000818 5.9e-07 58.2 65 44.6
Lsat_1_v5_gn_2_131821 Lactuca sativa HOM05D002077 ORTHO05D000818 7.7e-07 57.8 60 46.7
HanXRQChr15g0495591 Helianthus annuus HOM05D002077 ORTHO05D000818 1.3e-06 57.0 60 43.3
Potri.015G139700 Populus trichocarpa HOM05D002077 ORTHO05D000818 1.3e-06 57.0 52 51.9
QL09p041417 Quercus lobata HOM05D002077 ORTHO05D000818 1.3e-06 57.0 60 43.3
Aqoxy3G02725 Aquilegia oxysepala HOM05D002077 ORTHO05D000818 1.7e-06 56.6 69 40.6
QL12p002854 Quercus lobata HOM05D002077 ORTHO05D000818 1.7e-06 56.6 60 41.7
SGA_v2.0_scaffold10G05344 Striga asiatica HOM05D002077 ORTHO05D000818 1.7e-06 56.6 60 43.3
ECA232G3548 Erigeron canadensis HOM05D002077 ORTHO05D000818 2.2e-06 56.2 60 41.7
ECA238G3926 Erigeron canadensis HOM05D002077 ORTHO05D000818 2.2e-06 56.2 60 43.3
CSS0043143 Camellia sinensis var. sinensis HOM05D002077 ORTHO05D000818 2.9e-06 55.8 60 45.0
CAN.G913.4 Capsicum annuum HOM05D000541 ORTHO05D000818 2.9e-06 55.8 60 45.0
SalBow2G3420 Salvia bowleyana HOM05D002077 ORTHO05D000818 3.8e-06 55.5 60 43.3
C08p23850 Brassica napus HOM05D002077 ORTHO05D000818 5.0e-06 55.1 68 45.6
Thhalv10015761m.g Eutrema salsugineum HOM05D002077 ORTHO05D000818 6.5e-06 54.7 47 53.2
Migut.F01126 Erythranthe guttata HOM05D002077 ORTHO05D000818 8.5e-06 54.3 60 40.0
Oeu021781.1 Olea europaea HOM05D002077 ORTHO05D000818 8.5e-06 54.3 66 45.5


User provided reference genes

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