Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 5.3e-72 274.2 139 100.0
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 1.2e-60 236.5 139 88.5
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 7.5e-58 227.3 138 84.8
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.5e-50 203.0 138 75.4
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 4.1e-48 194.9 138 74.6
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 1.7e-46 189.5 135 77.0
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.1e-40 170.2 138 62.3
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 2.3e-38 162.5 137 59.9
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 1.5e-37 159.8 135 57.0
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 3.6e-36 155.2 144 54.9
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 3.6e-36 155.2 135 55.6
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 6.2e-36 154.5 138 55.8
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 3.1e-35 152.1 137 55.5
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 4.0e-35 151.8 142 56.3
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 5.2e-35 151.4 135 55.6
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 8.9e-35 150.6 138 53.6
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 8.9e-35 150.6 137 53.3
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 1.2e-34 150.2 137 55.5
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 5.8e-34 147.9 134 56.7
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 9.8e-34 147.1 164 50.0
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 3.7e-33 145.2 138 50.7
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 4.9e-33 144.8 133 57.1
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 8.3e-33 144.1 152 49.3
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.1e-32 143.7 167 46.1
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 1.4e-32 143.3 145 53.1
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 1.4e-32 143.3 139 56.1
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 1.9e-32 142.9 138 53.6
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 3.2e-32 142.1 137 51.1
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 4.1e-32 141.7 138 52.9
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 4.1e-32 141.7 166 48.2
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 9.2e-32 140.6 139 54.7
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 1.2e-31 140.2 136 50.7
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 1.2e-31 140.2 138 51.4
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 2.7e-31 139.0 137 48.9
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 4.6e-31 138.3 139 55.4
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 6.0e-31 137.9 140 50.7
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 1.3e-30 136.7 137 48.2
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.3e-30 136.7 138 50.7
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 1.7e-30 136.3 153 47.1
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 2.3e-30 136.0 154 50.0
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 3.9e-30 135.2 132 51.5
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 3.9e-30 135.2 137 51.1
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 1.1e-29 133.7 138 52.9
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.5e-29 133.3 139 51.8
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 3.3e-29 132.1 133 49.6
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 5.6e-29 131.3 150 44.0
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 5.6e-29 131.3 138 52.2
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 7.3e-29 131.0 169 43.8
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 1.6e-28 129.8 140 46.4
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 2.1e-28 129.4 130 47.7
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 2.8e-28 129.0 150 43.3
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 6.2e-28 127.9 133 48.1
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 6.8e-27 124.4 168 40.5
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 8.9e-27 124.0 153 45.1
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 1.5e-26 123.2 145 46.9
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 2.0e-26 122.9 152 45.4
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 4.4e-26 121.7 98 73.5
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 5.8e-26 121.3 163 38.7
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 9.9e-26 120.6 153 45.1
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 1.3e-25 120.2 138 47.1
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 2.2e-25 119.4 144 46.5
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.1e-24 117.1 155 43.9
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 1.4e-24 116.7 135 45.2
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 1.4e-24 116.7 152 43.4
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 1.9e-24 116.3 155 41.9
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 1.2e-23 113.6 134 44.0
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 1.6e-23 113.2 169 39.1
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 2.7e-23 112.5 163 39.3
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 2.7e-23 112.5 164 40.2
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 3.5e-23 112.1 155 41.3
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 4.6e-23 111.7 166 41.6
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 4.6e-23 111.7 164 39.0
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 4.6e-23 111.7 186 39.8
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.7e-22 109.8 150 40.0
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 3.0e-22 109.0 137 43.1
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 4.3e-21 105.1 138 43.5
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 5.6e-21 104.8 167 37.7
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 9.6e-21 104.0 163 39.3
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 9.6e-21 104.0 170 40.6
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.2e-20 103.6 135 45.9
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 1.2e-20 103.6 138 42.0
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 2.8e-20 102.4 138 41.3
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 1.4e-19 100.1 94 50.0
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 1.4e-19 100.1 94 50.0
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 1.5e-18 96.7 167 38.3
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 4.4e-18 95.1 189 33.9
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 3.8e-17 92.0 139 36.7
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.9e-16 89.7 112 47.3
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 3.2e-16 89.0 196 33.2
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 1.2e-15 87.0 167 34.1
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 1.2e-15 87.0 141 36.2
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 1.2e-15 87.0 139 36.0
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 1.6e-15 86.7 105 47.6
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 7.8e-15 84.3 196 33.2
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 1.7e-14 83.2 70 55.7
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 3.0e-14 82.4 141 35.5
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 4.3e-13 78.6 84 51.2
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 5.6e-13 78.2 120 43.3
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 2.1e-12 76.3 186 30.6
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 6.2e-12 74.7 96 44.8
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 8.1e-12 74.3 132 37.9
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 1.1e-11 73.9 127 40.2
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 1.4e-11 73.6 158 31.6
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 3.1e-11 72.4 103 39.8
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 1.2e-10 70.5 106 36.8
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 2.2e-09 66.2 115 41.7
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 2.2e-09 66.2 52 65.4
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 3.8e-09 65.5 76 52.6
unitig_749.g13722 Utricularia gibba HOM05D006778 ORTHO05D008341 6.4e-09 64.7 96 39.6
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 2.4e-08 62.8 132 31.8
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 5.4e-08 61.6 76 46.1
Gohir.A05G416601 Gossypium hirsutum HOM05D006778 ORTHO05D008341 6.0e-07 58.2 76 44.7
Gohir.A05G417001 Gossypium hirsutum HOM05D006778 ORTHO05D008341 6.0e-07 58.2 76 44.7
Gorai.012G000200 Gossypium raimondii HOM05D006778 ORTHO05D008341 6.0e-07 58.2 76 44.7
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 1.7e-06 56.6 52 55.8


User provided reference genes

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