Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g007850.3 Solanum lycopersicum HOM05D000162 ORTHO05D000090 8.4e-23 112.5 54 100.0
Sopen06g002700 Solanum pennellii HOM05D000162 ORTHO05D000090 1.6e-13 81.6 47 83.0
PGSC0003DMG400003403 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.6e-13 81.6 47 83.0
PGSC0003DMG400009683 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.5e-13 80.5 47 80.9
PGSC0003DMG400020644 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.5e-13 80.5 46 82.6
PGSC0003DMG400020643 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.3e-12 78.6 47 76.6
Solyc05g009253.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.8e-12 78.2 47 78.7
PGSC0003DMG400009682 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.8e-12 78.2 54 66.7
PGSC0003DMG400009687 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.8e-12 78.2 46 78.3
Nitab4.5_0002641g0030 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.3e-12 77.8 47 76.6
CAN.G741.40 Capsicum annuum HOM05D000162 ORTHO05D000090 3.9e-12 77.0 47 74.5
Sopen06g002610 Solanum pennellii HOM05D000162 ORTHO05D000090 3.9e-12 77.0 47 78.7
PGSC0003DMG400022035 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.9e-12 77.0 47 76.6
CAN.G241.21 Capsicum annuum HOM05D000162 ORTHO05D000090 6.7e-12 76.3 47 74.5
CAN.G1767.1 Capsicum annuum HOM05D000162 ORTHO05D000090 8.7e-12 75.9 47 74.5
Nitab4.5_0003952g0090 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.1e-11 75.5 47 74.5
PGSC0003DMG400003401 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.1e-11 75.5 46 78.3
Sopen06g002620 Solanum pennellii HOM05D000162 ORTHO05D000090 1.5e-11 75.1 46 76.1
PGSC0003DMG400022036 Solanum tuberosum HOM05D000162 ORTHO05D000090 1.5e-11 75.1 47 74.5
Solyc06g007300.2 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.9e-11 74.7 46 78.3
Solyc06g007740.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.9e-11 74.7 46 78.3
Nitab4.5_0003952g0040 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.5e-11 74.3 46 78.3
CAN.G1440.7 Capsicum annuum HOM05D000162 ORTHO05D000090 3.3e-11 73.9 47 74.5
CAN.G1767.2 Capsicum annuum HOM05D001929 ORTHO05D000090 3.3e-11 73.9 47 72.3
Nitab4.5_0002641g0070 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.3e-11 73.9 47 72.3
Nitab4.5_0003952g0060 Nicotiana tabacum HOM05D000162 ORTHO05D000090 5.7e-11 73.2 47 74.5
Nitab4.5_0000295g0190 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.4e-11 72.8 46 73.9
Nitab4.5_0003952g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.4e-11 72.8 47 70.2
Sopen06g001200 Solanum pennellii HOM05D000162 ORTHO05D003288 7.4e-11 72.8 52 67.3
CAN.G869.9 Capsicum annuum HOM05D000162 ORTHO05D000090 9.6e-11 72.4 47 72.3
Sopen06g002220 Solanum pennellii HOM05D000162 ORTHO05D000090 9.6e-11 72.4 46 76.1
Nitab4.5_0002932g0070 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.3e-10 72.0 47 70.2
Nitab4.5_0000556g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.6e-10 71.6 47 70.2
Solyc06g007820.1 Solanum lycopersicum HOM05D000162 ORTHO05D000090 1.6e-10 71.6 44 77.3
Sopen06g002690 Solanum pennellii HOM05D000162 ORTHO05D000090 1.6e-10 71.6 44 77.3
CAN.G1768.10 Capsicum annuum HOM05D000162 ORTHO05D000090 2.1e-10 71.2 46 71.7
Nitab4.5_0005212g0060 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.1e-10 71.2 47 70.2
Peaxi162Scf00158g00313 Petunia axillaris HOM05D000162 ORTHO05D000090 2.8e-10 70.9 47 70.2
PGSC0003DMG400020555 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.8e-10 70.9 46 71.7
PGSC0003DMG400020556 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.8e-10 70.9 48 66.7
Nitab4.5_0000428g0340 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.7e-10 70.5 46 69.6
Nitab4.5_0007991g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 3.7e-10 70.5 47 68.1
Solyc06g005220.2 Solanum lycopersicum HOM05D000162 ORTHO05D000090 3.7e-10 70.5 52 65.4
Nitab4.5_0000428g0270 Nicotiana tabacum HOM05D000162 ORTHO05D000090 4.8e-10 70.1 47 66.0
Peaxi162Scf00342g00097 Petunia axillaris HOM05D000162 ORTHO05D000090 4.8e-10 70.1 47 70.2
Nitab4.5_0013850g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 6.3e-10 69.7 47 68.1
Nitab4.5_0000428g0330 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.2e-10 69.3 47 66.0
Nitab4.5_0002932g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.2e-10 69.3 47 68.1
Nitab4.5_0009617g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.2e-10 69.3 47 68.1
Nitab4.5_0010755g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.2e-10 69.3 45 68.9
Peaxi162Scf00538g00035 Petunia axillaris HOM05D000162 ORTHO05D000090 8.2e-10 69.3 47 70.2
Peaxi162Scf00538g00042 Petunia axillaris HOM05D000162 ORTHO05D000090 8.2e-10 69.3 46 71.7
Nitab4.5_0000428g0260 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.1e-09 68.9 40 77.5
Peaxi162Scf00129g00156 Petunia axillaris HOM05D000162 ORTHO05D000090 1.1e-09 68.9 47 68.1
Peaxi162Scf00342g00122 Petunia axillaris HOM05D000162 ORTHO05D000090 1.1e-09 68.9 47 68.1
Peaxi162Scf00342g00929 Petunia axillaris HOM05D000162 ORTHO05D000090 1.1e-09 68.9 47 68.1
Nitab4.5_0008316g0040 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.4e-09 68.6 46 71.7
Peaxi162Scf00342g01331 Petunia axillaris HOM05D000162 ORTHO05D000090 1.8e-09 68.2 47 66.0
Nitab4.5_0000428g0310 Nicotiana tabacum HOM05D000162 ORTHO05D012019 2.4e-09 67.8 40 77.5
Nitab4.5_0000428g0430 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.4e-09 67.8 47 66.0
Nitab4.5_0000956g0140 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.4e-09 67.8 47 70.2
Nitab4.5_0010755g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.4e-09 67.8 47 66.0
Peaxi162Scf00345g00041 Petunia axillaris HOM05D000162 ORTHO05D000090 2.4e-09 67.8 47 66.0
Peaxi162Scf00129g01534 Petunia axillaris HOM05D000162 ORTHO05D000090 3.1e-09 67.4 46 67.4
Peaxi162Scf00158g00230 Petunia axillaris HOM05D000162 ORTHO05D000090 4.1e-09 67.0 47 63.8
Peaxi162Scf00273g00105 Petunia axillaris HOM05D000162 ORTHO05D000090 4.1e-09 67.0 46 69.6
Peaxi162Scf00342g01215 Petunia axillaris HOM05D000162 ORTHO05D000090 4.1e-09 67.0 47 63.8
Peaxi162Scf00342g01012 Petunia axillaris HOM05D000162 ORTHO05D000090 5.3e-09 66.6 46 67.4
Peaxi162Scf00129g01612 Petunia axillaris HOM05D000162 ORTHO05D000090 6.9e-09 66.2 46 65.2
Peaxi162Scf00342g00103 Petunia axillaris HOM05D000162 ORTHO05D000090 6.9e-09 66.2 48 62.5
Peaxi162Scf00342g00111 Petunia axillaris HOM05D000162 ORTHO05D000090 6.9e-09 66.2 47 63.8
Peaxi162Scf00345g00051 Petunia axillaris HOM05D000162 ORTHO05D000090 6.9e-09 66.2 47 63.8
Peaxi162Scf00689g00424 Petunia axillaris HOM05D000162 ORTHO05D000090 6.9e-09 66.2 46 65.2
Nitab4.5_0007124g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 9.0e-09 65.9 47 66.0
Peaxi162Scf00342g00102 Petunia axillaris HOM05D000162 ORTHO05D000090 9.0e-09 65.9 46 65.2
Peaxi162Scf00342g00124 Petunia axillaris HOM05D000162 ORTHO05D000090 9.0e-09 65.9 46 65.2
Nitab4.5_0000157g0280 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.2e-08 65.5 47 63.8
Peaxi162Scf00129g00153 Petunia axillaris HOM05D000162 ORTHO05D000090 1.2e-08 65.5 47 63.8
Peaxi162Scf01053g00033 Petunia axillaris HOM05D000162 ORTHO05D000090 1.2e-08 65.5 47 66.0
Nitab4.5_0001998g0170 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.5e-08 65.1 47 63.8
Nitab4.5_0002468g0090 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.5e-08 65.1 47 63.8
Peaxi162Scf00273g00104 Petunia axillaris HOM05D000162 ORTHO05D000090 1.5e-08 65.1 46 67.4
Nitab4.5_0003068g0050 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.0e-08 64.7 47 63.8
PGSC0003DMG400020776 Solanum tuberosum HOM05D000162 ORTHO05D000090 2.6e-08 64.3 47 63.8
CAN.G48.1 Capsicum annuum HOM05D000162 ORTHO05D000090 4.5e-08 63.5 47 61.7
Nitab4.5_0012011g0010 Nicotiana tabacum HOM05D000162 ORTHO05D000090 5.9e-08 63.2 47 61.7
Peaxi162Scf00326g00074 Petunia axillaris HOM05D000162 ORTHO05D000090 5.9e-08 63.2 37 75.7
Peaxi162Scf01021g00023 Petunia axillaris HOM05D000162 ORTHO05D000090 5.9e-08 63.2 44 65.9
Peaxi162Scf00158g00032 Petunia axillaris HOM05D000162 ORTHO05D000090 7.6e-08 62.8 44 63.6
Peaxi162Scf00677g00039 Petunia axillaris HOM05D000162 ORTHO05D000090 7.6e-08 62.8 46 60.9
Nitab4.5_0000428g0440 Nicotiana tabacum HOM05D000162 ORTHO05D000090 1.0e-07 62.4 46 60.9
Peaxi162Scf00129g01670 Petunia axillaris HOM05D000162 ORTHO05D000090 1.0e-07 62.4 47 59.6
Peaxi162Scf00342g00138 Petunia axillaris HOM05D000162 ORTHO05D000090 1.3e-07 62.0 46 63.0
Nitab4.5_0000428g0230 Nicotiana tabacum HOM05D000162 ORTHO05D000090 2.2e-07 61.2 43 65.1
Peaxi162Scf00158g00041 Petunia axillaris HOM05D000162 ORTHO05D000090 2.2e-07 61.2 47 59.6
Peaxi162Scf01021g00215 Petunia axillaris HOM05D000162 ORTHO05D000090 2.2e-07 61.2 38 73.7
CAN.G741.27 Capsicum annuum HOM05D000162 ORTHO05D000090 2.9e-07 60.8 42 69.0
Peaxi162Scf01475g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 3.8e-07 60.5 46 65.2
PGSC0003DMG400003402 Solanum tuberosum HOM05D024486 ORTHO05D022728 3.8e-07 60.5 36 80.6
Peaxi162Scf00154g00035 Petunia axillaris HOM05D000162 ORTHO05D000090 5.0e-07 60.1 47 57.4
Peaxi162Scf00154g00039 Petunia axillaris HOM05D000162 ORTHO05D000090 8.4e-07 59.3 47 59.6
ECA232G1497 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.1e-06 58.9 44 59.1
Peaxi162Scf00154g00210 Petunia axillaris HOM05D000162 ORTHO05D000090 1.1e-06 58.9 47 55.3
Peaxi162Scf00524g00101 Petunia axillaris HOM05D000162 ORTHO05D000090 1.1e-06 58.9 38 68.4
Sopen06g004630 Solanum pennellii HOM05D011051 ORTHO05D003288 1.1e-06 58.9 31 90.3
HanXRQChr07g0204921 Helianthus annuus HOM05D000162 ORTHO05D000090 1.4e-06 58.5 49 53.1
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 1.9e-06 58.2 48 58.3
Peaxi162Scf00154g00044 Petunia axillaris HOM05D000162 ORTHO05D000090 2.5e-06 57.8 47 53.2
Peaxi162Scf00154g00321 Petunia axillaris HOM05D000162 ORTHO05D000090 2.5e-06 57.8 47 55.3
HanXRQChr08g0216901 Helianthus annuus HOM05D000162 ORTHO05D000090 3.2e-06 57.4 49 53.1
ECA238G3715 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.2e-06 57.0 46 58.7
PGSC0003DMG400003400 Solanum tuberosum HOM05D011051 ORTHO05D003288 4.2e-06 57.0 37 73.0
HanXRQChr07g0203521 Helianthus annuus HOM05D000162 ORTHO05D000090 5.5e-06 56.6 49 51.0
HanXRQChr10g0284831 Helianthus annuus HOM05D000162 ORTHO05D000090 7.2e-06 56.2 51 49.0
Peaxi162Scf00154g00326 Petunia axillaris HOM05D000162 ORTHO05D000090 7.2e-06 56.2 47 51.1
HanXRQChr07g0204941 Helianthus annuus HOM05D000162 ORTHO05D000090 9.3e-06 55.8 49 51.0
HanXRQChr14g0435461 Helianthus annuus HOM05D000162 ORTHO05D000090 9.3e-06 55.8 51 49.0


User provided reference genes

Program Settings