Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g045822.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.1e-32 141.7 70 100.0
Sopen05g027070 Solanum pennellii HOM05D001987 ORTHO05D006514 3.6e-16 87.8 70 61.4
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 8.0e-16 86.7 69 60.9
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.0e-16 86.7 51 76.5
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.0e-16 86.7 51 76.5
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.0e-16 86.7 51 76.5
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.0e-16 86.7 51 76.5
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.0e-16 86.7 51 76.5
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.4e-15 85.9 50 78.0
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.4e-15 85.9 50 78.0
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 2.3e-15 85.1 51 76.5
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 6.7e-15 83.6 51 74.5
ECA240G1514 Erigeron canadensis HOM05D001987 ORTHO05D006514 6.7e-15 83.6 51 74.5
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 6.7e-15 83.6 51 74.5
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 6.7e-15 83.6 51 74.5
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 6.7e-15 83.6 51 74.5
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 6.7e-15 83.6 51 74.5
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 3.3e-14 81.3 51 72.5
Solyc09g015850.4 Solanum lycopersicum HOM05D001987 ORTHO05D006514 3.3e-14 81.3 81 53.1
Actinidia34925 Actinidia chinensis HOM05D001987 ORTHO05D006514 4.4e-14 80.9 51 72.5
HanXRQChr14g0433081 Helianthus annuus HOM05D001987 ORTHO05D006514 4.4e-14 80.9 51 72.5
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 5.7e-14 80.5 51 72.5
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 5.7e-14 80.5 51 72.5
MBI16_g09478_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 5.7e-14 80.5 49 75.5
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 5.7e-14 80.5 51 72.5
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 5.7e-14 80.5 51 72.5
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 7.4e-14 80.1 51 70.6
Nn1g10074 Nelumbo nucifera HOM05D001987 ORTHO05D006514 1.3e-13 79.3 51 70.6
RhsimMtG0002600 Rhododendron simsii HOM05D001987 ORTHO05D006514 1.3e-13 79.3 51 70.6
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 2.2e-13 78.6 91 52.7
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 3.7e-13 77.8 66 57.6
Nitab4.5_0009703g0120 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.7e-13 77.8 76 55.3
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 4.8e-13 77.4 51 66.7
CAN.G1202.8 Capsicum annuum HOM05D001987 ORTHO05D006514 4.8e-13 77.4 49 73.5
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 4.8e-13 77.4 55 69.1
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 4.8e-13 77.4 55 69.1
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 8.2e-13 76.6 67 56.7
BolSC28t60315H Brassica oleracea HOM05D001987 ORTHO05D006514 8.2e-13 76.6 67 56.7
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 8.2e-13 76.6 67 56.7
BraSC159t45730Z Brassica rapa HOM05D001987 ORTHO05D006514 8.2e-13 76.6 67 56.7
Aa31csc822G30 Aethionema arabicum HOM05D001987 ORTHO05D006514 1.4e-12 75.9 51 68.6
Sp3g25720 Schrenkiella parvula HOM05D001987 ORTHO05D006514 1.4e-12 75.9 69 55.1
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 1.4e-12 75.9 50 68.0
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 4.1e-12 74.3 70 58.6
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 7.0e-12 73.6 51 66.7
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 9.1e-12 73.2 72 52.8
SGA_v2.0_scaffold339G49282 Striga asiatica HOM05D001987 ORTHO05D006514 3.5e-11 71.2 50 66.0
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 7.7e-11 70.1 54 64.8
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 7.7e-11 70.1 54 64.8
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 7.7e-11 70.1 54 64.8
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 7.7e-11 70.1 54 64.8
Nitab4.5_0000309g0220 Nicotiana tabacum HOM05D001987 ORTHO05D006514 7.7e-11 70.1 45 73.3
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 1.3e-10 69.3 51 64.7
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 2.9e-10 68.2 51 64.7
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.8e-10 67.8 43 72.1
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.8e-10 67.8 43 72.1
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.8e-10 67.8 43 72.1
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.8e-10 67.8 43 72.1
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 3.8e-10 67.8 43 72.1
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.0e-07 59.7 42 66.7
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 1.0e-07 59.7 43 62.8
MELO3C028575.2 Cucumis melo HOM05D001987 ORTHO05D006514 1.4e-07 59.3 74 50.0
Peaxi162Scf00934g00143 Petunia axillaris HOM05D001987 ORTHO05D006514 4.0e-07 57.8 66 47.0
Solyc05g045770.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.5e-06 55.8 37 67.6
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 2.0e-06 55.5 41 63.4
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 2.6e-06 55.1 31 74.2
Solyc03g063770.3 Solanum lycopersicum HOM05D001987 ORTHO05D006514 5.7e-06 53.9 28 82.1


User provided reference genes

Program Settings