Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g032650.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 5.0e-131 471.1 234 100.0
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 1.7e-46 190.3 133 70.7
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 1.8e-43 180.3 133 66.9
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 1.2e-36 157.5 248 38.3
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 1.0e-35 154.5 138 58.0
SGA_v2.0_scaffold21G09390 Striga asiatica HOM05D005251 ORTHO05D006680 1.8e-35 153.7 137 55.5
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 5.2e-35 152.1 138 54.3
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 6.7e-35 151.8 136 55.1
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 9.7e-34 147.9 133 55.6
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 8.2e-33 144.8 137 52.6
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 1.1e-32 144.4 131 53.4
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 1.1e-32 144.4 287 33.4
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 2.4e-32 143.3 130 53.8
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 3.1e-32 142.9 129 52.7
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 5.3e-32 142.1 138 52.2
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 5.3e-32 142.1 133 54.1
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 9.1e-32 141.4 274 36.1
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 1.2e-31 141.0 131 55.0
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.2e-31 141.0 130 53.1
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 1.6e-31 140.6 131 51.9
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 1.6e-31 140.6 129 56.6
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 2.0e-31 140.2 133 51.9
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 3.5e-31 139.4 138 50.7
vmacro17241 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 3.5e-31 139.4 133 51.9
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 4.5e-31 139.0 131 51.9
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 4.5e-31 139.0 133 52.6
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 4.5e-31 139.0 131 52.7
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 4.5e-31 139.0 138 51.4
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 5.9e-31 138.7 129 55.0
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 5.9e-31 138.7 135 51.9
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 5.9e-31 138.7 131 51.9
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 1.3e-30 137.5 139 49.6
Lalb_Chr12g0199791 Lupinus albus HOM05D005251 ORTHO05D006680 2.2e-30 136.7 140 49.3
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 6.5e-30 135.2 131 49.6
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 6.5e-30 135.2 140 47.9
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 6.5e-30 135.2 131 50.4
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 1.1e-29 134.4 138 51.4
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 1.1e-29 134.4 133 48.9
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 1.5e-29 134.0 139 48.9
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 1.5e-29 134.0 134 53.0
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 1.5e-29 134.0 138 50.7
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 1.9e-29 133.7 133 49.6
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 1.9e-29 133.7 133 49.6
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 2.5e-29 133.3 131 50.4
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 3.2e-29 132.9 129 53.5
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 3.2e-29 132.9 134 50.7
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 3.2e-29 132.9 133 51.9
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 4.2e-29 132.5 140 48.6
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.2e-29 132.5 140 48.6
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.2e-29 132.5 145 47.6
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.2e-29 132.5 145 47.6
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 4.2e-29 132.5 133 51.9
CARHR270650 Cardamine hirsuta HOM05D005251 ORTHO05D006680 5.5e-29 132.1 141 47.5
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 5.5e-29 132.1 139 48.2
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 5.5e-29 132.1 139 48.9
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 5.5e-29 132.1 131 52.7
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 7.2e-29 131.7 129 51.2
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 7.2e-29 131.7 130 50.8
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 7.2e-29 131.7 130 50.8
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 7.2e-29 131.7 135 51.9
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 9.4e-29 131.3 130 50.8
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 9.4e-29 131.3 131 51.9
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 1.2e-28 131.0 133 48.9
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 1.2e-28 131.0 133 49.6
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 1.6e-28 130.6 131 50.4
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 2.1e-28 130.2 131 50.4
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 2.1e-28 130.2 140 47.9
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 2.1e-28 130.2 131 51.1
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 2.1e-28 130.2 131 49.6
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 3.6e-28 129.4 138 50.7
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 6.1e-28 128.6 129 49.6
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 1.0e-27 127.9 130 49.2
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 1.0e-27 127.9 130 49.2
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 1.0e-27 127.9 130 49.2
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 1.4e-27 127.5 127 51.2
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.4e-27 127.5 146 47.3
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 1.4e-27 127.5 135 49.6
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 1.4e-27 127.5 140 47.1
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 1.8e-27 127.1 131 49.6
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 1.8e-27 127.1 140 47.9
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 3.0e-27 126.3 131 51.1
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 3.0e-27 126.3 140 46.4
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 4.0e-27 125.9 128 50.8
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 4.0e-27 125.9 130 49.2
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 5.2e-27 125.6 140 46.4
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 8.8e-27 124.8 142 46.5
Peaxi162Scf00498g00321 Petunia axillaris HOM05D005251 ORTHO05D006680 1.2e-26 124.4 143 50.3
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 1.5e-26 124.0 130 47.7
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 4.4e-26 122.5 130 46.9
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 1.1e-24 117.9 141 45.4
Nitab4.5_0008523g0050 Nicotiana tabacum HOM05D005251 ORTHO05D006680 1.1e-24 117.9 124 52.4
MD15G1207600 Malus domestica HOM05D005251 ORTHO05D006680 5.3e-24 115.5 159 42.8
Solyc12g008870.1 Solanum lycopersicum HOM05D005251 ORTHO05D006680 5.9e-23 112.1 86 66.3
Sopen12g003800 Solanum pennellii HOM05D005251 ORTHO05D006680 2.2e-22 110.2 86 65.1
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 2.1e-20 103.6 135 39.3
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 1.7e-17 94.0 100 46.0
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 2.8e-17 93.2 145 35.2
Nitab4.5_0000540g0310 Nicotiana tabacum HOM05D005251 ORTHO05D006680 2.4e-16 90.1 96 53.1
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 2.7e-15 86.7 130 36.2
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 3.5e-15 86.3 127 36.2
Atru.chr7.1595 Acer truncatum HOM05D005251 ORTHO05D006680 5.9e-15 85.5 92 50.0
vmacro17238 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 8.6e-14 81.6 103 43.7
Zm00001eb311020 Zea mays HOM05D005251 ORTHO05D006680 1.5e-10 70.9 91 42.9
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 3.4e-10 69.7 63 49.2
CBR_g54012 Chara braunii HOM05D005251 ORTHO05D006680 8.3e-09 65.1 64 46.9
Sopen12g003810 Solanum pennellii HOM05D005251 ORTHO05D006680 8.3e-09 65.1 39 79.5
Nitab4.5_0000540g0330 Nicotiana tabacum HOM05D005251 ORTHO05D006680 1.1e-08 64.7 41 73.2
Solyc12g008890.3 Solanum lycopersicum HOM05D005251 ORTHO05D006680 1.4e-08 64.3 39 79.5
SGA_v2.0_scaffold21G09392 Striga asiatica HOM05D005251 ORTHO05D006680 4.1e-08 62.8 50 64.0
vmacro17242 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 5.4e-08 62.4 39 76.9
arahy.Tifrunner.gnm1.ann1.V18GKH Arachis hypogaea HOM05D005251 ORTHO05D006680 2.7e-07 60.1 46 65.2
Lalb_Chr12g0199801 Lupinus albus HOM05D005251 ORTHO05D006680 5.9e-07 58.9 46 65.2
Duzib168G1322 Durio zibethinus HOM05D005251 ORTHO05D006680 2.9e-06 56.6 131 29.0
SEGI_26696 Sequoiadendron giganteum HOM05D005251 ORTHO05D006680 3.8e-06 56.2 83 38.6
HPP92_009143 Vanilla planifolia HOM05D005251 ORTHO05D006680 5.0e-06 55.8 35 71.4


User provided reference genes

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