Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g023725.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.0e-76 287.3 159 100.0
Gohir.1Z049566 Gossypium hirsutum HOM05D008922 ORTHO05D010978 4.4e-54 214.9 136 79.4
Solyc00g500033.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.5e-54 214.2 130 83.1
Solyc00g500078.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.5e-54 214.2 130 83.1
Solyc00g500129.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.5e-54 214.2 130 83.1
Solyc00g500199.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.5e-54 214.2 130 83.1
Solyc00g500328.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 4.9e-53 211.5 129 82.9
Solyc00g500151.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.4e-52 209.9 130 80.8
ScUNg0000580 Simmondsia chinensis HOM05D001387 ORTHO05D010978 7.8e-51 204.1 135 77.8
Gorai.002G146700 Gossypium raimondii HOM05D008922 ORTHO05D010978 1.3e-50 203.4 152 71.7
Gohir.A12G138620 Gossypium hirsutum HOM05D008922 ORTHO05D010978 1.2e-48 196.8 127 76.4
RhsimPtG0002400 Rhododendron simsii HOM05D008922 ORTHO05D010978 3.1e-47 192.2 134 72.4
Gohir.D04G160150 Gossypium hirsutum HOM05D008922 ORTHO05D010978 1.2e-46 190.3 128 73.4
Gorai.005G093900 Gossypium raimondii HOM05D008922 ORTHO05D010978 1.6e-43 179.9 129 71.3
Gohir.D02G149550 Gossypium hirsutum HOM05D008922 ORTHO05D010978 2.0e-43 179.5 126 71.4
CAN.G484.107 Capsicum annuum HOM05D008922 ORTHO05D010978 2.7e-43 179.1 129 71.3
Solyc10g012213.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.7e-42 176.4 113 79.6
PGSC0003DMG400004211 Solanum tuberosum HOM05D001387 ORTHO05D001250 3.9e-42 175.3 112 80.4
HanXRQChr00c0585g0576281 Helianthus annuus HOM05D008922 ORTHO05D010978 7.3e-41 171.0 111 79.3
Migut.D02168 Erythranthe guttata HOM05D008922 ORTHO05D010978 2.6e-38 162.5 110 76.4
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 7.1e-36 154.5 105 75.2
Oeu045555.1 Olea europaea HOM05D008922 ORTHO05D010978 2.5e-33 146.0 117 67.5
Eucgr.J02736 Eucalyptus grandis HOM05D008922 ORTHO05D010978 6.8e-31 137.9 97 74.2
Migut.A01147 Erythranthe guttata HOM05D008922 ORTHO05D010978 3.4e-30 135.6 95 73.7
Gorai.007G083900 Gossypium raimondii HOM05D008922 ORTHO05D010978 2.2e-29 132.9 99 69.7
HPP92_028403 Vanilla planifolia HOM05D008922 ORTHO05D010978 2.2e-29 132.9 96 68.8
HPP92_028411 Vanilla planifolia HOM05D008922 ORTHO05D010978 2.2e-29 132.9 96 68.8
HPP92_028427 Vanilla planifolia HOM05D008922 ORTHO05D010978 2.2e-29 132.9 96 68.8
SEGI_05822 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 3.1e-23 112.5 105 59.0
HanXRQChr08g0235731 Helianthus annuus HOM05D000445 ORTHO05D010978 3.4e-22 109.0 53 92.5
Gorai.011G182500 Gossypium raimondii HOM05D008922 ORTHO05D010978 9.9e-22 107.5 120 54.2
Gorai.012G032000 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.8e-21 105.5 99 60.6
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 8.4e-21 104.4 104 53.8
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 6.6e-18 94.7 51 88.2
Oeu028760.1 Olea europaea HOM05D001387 ORTHO05D001250 2.5e-17 92.8 50 88.0
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.8e-15 86.7 83 57.8
HanXRQChr12g0369781 Helianthus annuus HOM05D008922 ORTHO05D010978 1.5e-14 83.6 69 63.8
SGA_v2.0_scaffold477G52163 Striga asiatica HOM05D008922 ORTHO05D010978 5.8e-14 81.6 44 86.4
Oeu028750.1 Olea europaea HOM05D008922 ORTHO05D010978 9.9e-14 80.9 72 59.7
HanXRQChr00c0554g0575681 Helianthus annuus HOM05D008922 ORTHO05D010978 1.2e-11 73.9 64 60.9
EL10As9g23921 Beta vulgaris HOM05D008922 ORTHO05D010978 1.5e-09 67.0 77 50.6
Sc15g0001780 Simmondsia chinensis HOM05D001387 ORTHO05D001250 3.3e-09 65.9 58 60.3
arahy.Tifrunner.gnm1.ann1.9U8SPX Arachis hypogaea HOM05D008922 ORTHO05D010978 6.2e-08 61.6 90 46.7
Sopen01g027160 Solanum pennellii HOM05D008922 ORTHO05D010978 6.9e-07 58.2 53 60.4


User provided reference genes

Program Settings