Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g017795.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.3e-71 271.6 133 100.0
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.0e-64 250.0 130 93.8
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 6.7e-64 247.3 125 95.2
Sopen03g011240 Solanum pennellii HOM05D002538 ORTHO05D002334 5.7e-63 244.2 129 91.5
Sopen11g020370 Solanum pennellii HOM05D002261 ORTHO05D002334 1.6e-62 242.7 126 93.7
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 1.1e-61 240.0 126 92.9
Solyc11g013730.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.0e-59 233.4 156 76.3
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-53 210.3 110 91.8
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.0e-52 209.1 126 77.0
Solyc07g014750.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.4e-52 208.4 108 91.7
PGSC0003DMG400009893 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-52 208.0 126 79.4
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.0e-51 204.5 118 83.1
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.5e-51 203.8 125 76.8
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.5e-51 203.8 125 77.6
PGSC0003DMG400022355 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.2e-50 201.4 126 75.4
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.7e-49 198.0 119 79.0
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.8e-48 196.1 126 73.0
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.1e-45 185.3 119 72.3
Solyc02g005070.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.2e-44 183.3 101 89.1
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 1.2e-44 183.3 101 89.1
PGSC0003DMG401024222 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.4e-42 176.4 108 76.9
PGSC0003DMG400021840 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.0e-40 168.7 146 58.9
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.0e-39 166.0 97 81.4
Solyc09g055990.2 Solanum lycopersicum HOM05D000049 ORTHO05D002334 1.2e-33 146.7 93 77.4
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.1e-33 146.0 126 55.6
CAN.G15.23 Capsicum annuum HOM05D002261 ORTHO05D002334 4.4e-31 138.3 124 50.0
CAN.G933.9 Capsicum annuum HOM05D002261 ORTHO05D002334 4.4e-31 138.3 124 50.0
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 4.8e-30 134.8 126 46.8
Solyc03g150112.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 4.1e-29 131.7 73 83.6
Nitab4.5_0005791g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.7e-28 127.5 122 50.0
Nitab4.5_0003524g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-22 109.8 118 49.2
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 7.7e-20 100.9 125 42.4
PGSC0003DMG400025489 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.9e-19 99.0 64 71.9
Nitab4.5_0005054g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.0e-19 98.2 127 41.7
Peaxi162Scf00558g00118 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-18 96.7 126 37.3
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 2.5e-18 95.9 128 41.4
CAN.G217.14 Capsicum annuum HOM05D002261 ORTHO05D002334 4.2e-18 95.1 84 53.6
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 5.5e-18 94.7 127 40.2
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-17 92.4 124 41.1
Peaxi162Scf00211g00164 Petunia axillaris HOM05D002261 ORTHO05D002334 3.6e-17 92.0 91 45.1
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.7e-17 91.7 132 38.6
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 6.1e-17 91.3 127 38.6
Nitab4.5_0006911g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.0e-17 90.9 125 36.0
Nitab4.5_0009143g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.0e-17 90.9 111 40.5
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 8.0e-17 90.9 128 42.2
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 8.0e-17 90.9 127 38.6
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-16 90.5 120 40.0
Peaxi162Scf00007g01337 Petunia axillaris HOM05D002261 ORTHO05D002334 1.4e-16 90.1 135 40.0
Peaxi162Scf00345g00126 Petunia axillaris HOM05D002261 ORTHO05D002334 2.3e-16 89.4 129 38.8
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 3.0e-16 89.0 128 40.6
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.0e-16 89.0 126 38.9
Nitab4.5_0005917g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-16 88.2 128 39.1
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-15 87.0 130 37.7
Nitab4.5_0005023g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-15 86.7 67 59.7
Nitab4.5_0001568g0120 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.7e-15 84.7 127 35.4
Nitab4.5_0000119g0230 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-15 84.0 129 36.4
Nitab4.5_0001709g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-15 84.0 70 57.1
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 9.8e-15 84.0 130 37.7
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-14 83.2 127 37.0
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 1.7e-14 83.2 119 39.5
Nitab4.5_0001522g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-14 82.8 112 38.4
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-14 82.8 131 34.4
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.7e-14 82.0 143 32.2
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-13 80.1 128 35.9
PGSC0003DMG400025596 Solanum tuberosum HOM05D000072 ORTHO05D002334 1.4e-13 80.1 83 51.8
Nitab4.5_0004260g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-13 79.7 115 36.5
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 1.8e-13 79.7 102 39.2
Nitab4.5_0000600g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.4e-13 79.3 125 32.0
Nitab4.5_0006835g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.4e-13 79.3 126 33.3
Nitab4.5_0009613g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.2e-13 79.0 126 33.3
Nitab4.5_0000105g0350 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.1e-13 78.6 126 33.3
Nitab4.5_0000230g0260 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.0e-13 77.8 100 44.0
Nitab4.5_0000402g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.0e-13 77.8 82 47.6
Nitab4.5_0011225g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.0e-13 77.8 114 36.0
Nitab4.5_0000230g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.2e-13 77.4 126 34.9
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 9.2e-13 77.4 106 36.8
Nitab4.5_0000113g0330 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-12 77.0 127 33.1
Nitab4.5_0000877g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-12 77.0 126 33.3
Sopen01g022130 Solanum pennellii HOM05D002261 ORTHO05D002334 1.6e-12 76.6 111 37.8
CAN.G165.12 Capsicum annuum HOM05D002261 ORTHO05D002334 2.0e-12 76.3 124 33.9
Nitab4.5_0004225g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.5e-12 75.1 81 45.7
Sopen07g011000 Solanum pennellii HOM05D000004 ORTHO05D002334 4.5e-12 75.1 106 34.9
Peaxi162Scf00842g00011 Petunia axillaris HOM05D002261 ORTHO05D002334 5.9e-12 74.7 131 35.9
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 7.8e-12 74.3 124 33.9
Nitab4.5_0004247g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.8e-12 74.3 126 34.1
Peaxi162Scf00371g00312 Petunia axillaris HOM05D002261 ORTHO05D002334 7.8e-12 74.3 89 38.2
Nitab4.5_0002427g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-11 73.9 96 40.6
Sopen04g022620 Solanum pennellii HOM05D002261 ORTHO05D002334 1.0e-11 73.9 117 37.6
Nitab4.5_0019209g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-11 73.2 122 32.8
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-11 73.2 93 36.6
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-11 73.2 89 37.1
Sopen05g027490 Solanum pennellii HOM05D002261 ORTHO05D002334 2.3e-11 72.8 117 36.8
Sopen07g022080 Solanum pennellii HOM05D002261 ORTHO05D002334 2.9e-11 72.4 106 35.8
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.9e-11 72.4 86 41.9
CAN.G255.16 Capsicum annuum HOM05D002261 ORTHO05D002334 3.9e-11 72.0 126 30.2
Nitab4.5_0000605g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-11 72.0 95 40.0
Nitab4.5_0012627g0010 Nicotiana tabacum HOM05D002261 ORTHO05D049374 3.9e-11 72.0 87 41.4
Solyc04g025320.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.9e-11 72.0 86 41.9
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 3.9e-11 72.0 67 50.7
Nitab4.5_0001659g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.6e-11 71.2 81 43.2
Nitab4.5_0009754g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.6e-11 70.9 84 36.9
Nitab4.5_0009976g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-10 70.5 81 43.2
Nitab4.5_0000659g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-10 70.1 80 37.5
Peaxi162Scf00044g00014 Petunia axillaris HOM05D002261 ORTHO05D002334 1.9e-10 69.7 99 37.4
Peaxi162Scf00582g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 1.9e-10 69.7 98 37.8
Peaxi162Scf00586g00013 Petunia axillaris HOM05D002261 ORTHO05D002334 1.9e-10 69.7 116 36.2
Nitab4.5_0000941g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.5e-10 69.3 129 32.6
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.3e-10 68.9 124 31.5
Nitab4.5_0013103g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.3e-10 67.8 75 42.7
Peaxi162Scf00047g00443 Petunia axillaris HOM05D002261 ORTHO05D002334 7.3e-10 67.8 81 44.4
Peaxi162Scf00752g00610 Petunia axillaris HOM05D002261 ORTHO05D002334 7.3e-10 67.8 90 42.2
Peaxi162Scf00028g00075 Petunia axillaris HOM05D002261 ORTHO05D002334 9.5e-10 67.4 91 39.6
CAN.G135.43 Capsicum annuum HOM05D002261 ORTHO05D002334 1.2e-09 67.0 95 35.8
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-09 67.0 124 33.9
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-09 67.0 79 44.3
Nitab4.5_0004688g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-09 66.6 87 40.2
Nitab4.5_0007441g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-09 66.6 110 32.7
Peaxi162Scf00102g00014 Petunia axillaris HOM05D056814 ORTHO05D002334 2.8e-09 65.9 73 42.5
Peaxi162Scf00206g00046 Petunia axillaris HOM05D002261 ORTHO05D002334 2.8e-09 65.9 80 41.2
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.7e-09 65.1 84 41.7
CAN.G280.21 Capsicum annuum HOM05D002261 ORTHO05D002334 8.0e-09 64.3 88 38.6
CAN.G170.120 Capsicum annuum HOM05D002261 ORTHO05D002334 1.0e-08 63.9 66 40.9
Nitab4.5_0000336g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-08 63.9 99 33.3
Peaxi162Scf00951g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-08 63.9 90 38.9
Peaxi162Scf07758g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-08 63.9 75 37.3
Nitab4.5_0009745g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.4e-08 63.5 91 37.4
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-08 63.2 95 34.7
Nitab4.5_0000616g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.3e-08 62.8 103 33.0
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 4.0e-08 62.0 85 38.8
CAN.G619.1 Capsicum annuum HOM05D002261 ORTHO05D002334 5.2e-08 61.6 88 37.5
Nitab4.5_0000754g0300 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-08 61.6 81 39.5
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 5.2e-08 61.6 82 35.4
CAN.G864.2 Capsicum annuum HOM05D002261 ORTHO05D002334 6.8e-08 61.2 76 40.8
Nitab4.5_0002219g0070 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.9e-08 60.8 127 31.5
CAN.G223.2 Capsicum annuum HOM05D002261 ORTHO05D002334 1.5e-07 60.1 84 36.9
Nitab4.5_0000842g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.0e-07 59.7 61 42.6
Peaxi162Scf00285g00007 Petunia axillaris HOM05D002261 ORTHO05D002334 2.6e-07 59.3 82 34.1
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-07 58.9 89 32.6
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-07 57.8 55 43.6
Nitab4.5_0000231g0450 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-07 57.4 88 35.2
Nitab4.5_0000578g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-07 57.4 120 30.8
Nitab4.5_0002052g0140 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-07 57.4 75 41.3
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 9.8e-07 57.4 40 75.0
Nitab4.5_0002569g0120 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-06 57.0 75 41.3
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-06 57.0 58 50.0
Nitab4.5_0005624g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-06 57.0 72 43.1
Nitab4.5_0022906g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-06 57.0 73 43.8
Nitab4.5_0003011g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-06 56.2 71 32.4
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-06 56.2 60 46.7
Nitab4.5_0019514g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.7e-06 55.5 76 42.1
Nitab4.5_0002625g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.9e-06 55.1 63 46.0
PGSC0003DMG400013166 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.9e-06 55.1 94 34.0
CAN.G315.4 Capsicum annuum HOM05D000541 ORTHO05D000137 6.4e-06 54.7 78 35.9
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.4e-06 54.7 40 60.0


User provided reference genes

Program Settings