Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g015380.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.3e-70 269.6 136 100.0
CAN.G804.3 Capsicum annuum HOM05D003724 ORTHO05D004367 1.1e-53 213.4 148 78.4
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 4.6e-52 208.0 148 76.4
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.7e-51 206.1 148 75.7
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 3.1e-48 195.3 159 70.4
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 7.9e-44 180.6 148 65.5
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.7e-41 171.8 161 59.0
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 4.8e-41 171.4 156 60.9
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 1.8e-40 169.5 149 66.4
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.9e-38 162.2 148 58.1
Sopen05g010670 Solanum pennellii HOM05D003724 ORTHO05D004367 2.1e-36 156.0 80 96.2
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 5.1e-35 151.4 161 54.7
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 1.9e-34 149.4 155 54.2
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 4.3e-34 148.3 160 53.8
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 1.3e-33 146.7 162 53.1
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 3.7e-33 145.2 158 52.5
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.4e-32 143.3 159 53.5
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 5.3e-32 141.4 159 54.7
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 6.9e-32 141.0 160 52.5
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 6.9e-32 141.0 159 53.5
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.5e-31 139.8 159 52.2
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.5e-31 139.8 156 50.6
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 1.5e-31 139.8 158 50.6
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 2.6e-31 139.0 160 48.8
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 2.2e-30 136.0 159 50.3
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 2.9e-30 135.6 161 50.3
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 4.9e-30 134.8 159 49.7
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 1.1e-29 133.7 161 51.6
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 2.7e-28 129.0 160 50.6
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 6.0e-28 127.9 161 47.2
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 1.0e-27 127.1 160 50.0
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 1.3e-27 126.7 160 48.1
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 2.3e-27 125.9 160 48.1
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 3.9e-27 125.2 160 47.5
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 8.7e-27 124.0 160 48.1
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 8.7e-27 124.0 170 46.5
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.5e-26 123.2 162 46.9
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.5e-26 123.2 160 47.5
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 2.5e-26 122.5 160 47.5
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 2.5e-26 122.5 158 48.1
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 3.3e-26 122.1 160 46.9
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 4.3e-26 121.7 149 51.0
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 4.3e-26 121.7 160 48.1
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 5.7e-26 121.3 160 46.9
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 7.4e-26 120.9 160 45.6
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 9.7e-26 120.6 160 46.2
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 1.3e-25 120.2 161 46.0
FvH4_2g22740 Fragaria vesca HOM05D003724 ORTHO05D004367 1.6e-25 119.8 164 45.7
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 1.6e-25 119.8 160 45.6
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 2.2e-25 119.4 160 45.6
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 2.2e-25 119.4 164 47.6
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 4.8e-25 118.2 158 48.7
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 4.8e-25 118.2 166 44.0
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 6.3e-25 117.9 160 45.0
SHI17969 Sapria himalayana HOM05D003724 ORTHO05D004367 6.3e-25 117.9 150 48.7
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 1.1e-24 117.1 160 48.1
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 1.4e-24 116.7 157 49.0
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.4e-24 116.7 167 46.7
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.8e-24 116.3 166 45.2
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 2.4e-24 115.9 160 48.1
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 3.1e-24 115.5 160 45.0
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 4.1e-24 115.2 160 44.4
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 5.3e-24 114.8 158 47.5
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 6.9e-24 114.4 160 46.9
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.0e-23 112.8 160 44.4
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 4.5e-23 111.7 150 49.3
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 4.5e-23 111.7 160 46.9
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 4.5e-23 111.7 149 48.3
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 4.5e-23 111.7 156 47.4
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 5.9e-23 111.3 156 46.8
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.0e-22 110.5 166 42.2
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 1.0e-22 110.5 146 45.2
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.7e-22 109.8 157 43.3
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 2.2e-22 109.4 150 48.7
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 2.2e-22 109.4 151 47.0
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 2.2e-22 109.4 159 45.3
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 3.8e-22 108.6 156 46.8
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 6.5e-22 107.8 151 49.0
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 8.5e-22 107.5 151 49.0
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 8.5e-22 107.5 151 49.0
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 1.4e-21 106.7 171 42.1
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 1.9e-21 106.3 150 48.7
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 2.5e-21 105.9 151 48.3
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 2.5e-21 105.9 158 44.9
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 5.5e-21 104.8 160 46.2
BcaB03g15203 Brassica carinata HOM05D003724 ORTHO05D004367 2.1e-20 102.8 151 47.7
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 4.6e-20 101.7 147 46.3
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 4.6e-20 101.7 168 41.7
FvH4_4g23791 Fragaria vesca HOM05D003724 ORTHO05D004367 6.1e-20 101.3 160 43.1
FAN12G4010 Fragaria x ananassa HOM05D003724 ORTHO05D004367 6.1e-20 101.3 160 43.1
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 7.9e-20 100.9 149 46.3
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 1.0e-19 100.5 158 44.9
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 8.8e-19 97.4 176 38.1
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 1.1e-18 97.1 160 44.4
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 1.9e-18 96.3 161 45.3
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 2.5e-18 95.9 158 44.9
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 4.3e-18 95.1 158 44.3
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 4.3e-18 95.1 149 43.6
FAN12G4031 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.3e-17 93.6 116 46.6
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 2.8e-17 92.4 154 44.2
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 2.8e-17 92.4 158 43.0
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 6.3e-17 91.3 159 42.1
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 8.2e-17 90.9 155 42.6
vmacro01061 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 8.2e-17 90.9 101 53.5
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 1.1e-16 90.5 158 43.0
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 1.1e-16 90.5 146 41.1
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 1.4e-16 90.1 150 42.0
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 1.8e-16 89.7 150 42.0
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 1.8e-16 89.7 150 42.0
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 4.1e-16 88.6 150 42.0
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 2.6e-15 85.9 150 39.3
CSS0010492 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 5.9e-15 84.7 101 47.5
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 7.7e-15 84.3 156 39.1
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 2.2e-14 82.8 124 42.7
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 3.2e-13 79.0 129 41.9
FAN07G2055 Fragaria x ananassa HOM05D003724 ORTHO05D004367 7.2e-13 77.8 144 41.0
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 9.4e-13 77.4 111 45.0
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 1.6e-12 76.6 161 41.0
PSO170G3909 Papaver somniferum HOM05D003724 ORTHO05D004367 1.0e-11 73.9 131 39.7
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 1.0e-11 73.9 100 48.0
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 1.4e-11 73.6 162 38.9
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 3.9e-11 72.0 155 36.8
Phvul.001G261701 Phaseolus vulgaris HOM05D003724 ORTHO05D004367 1.1e-08 63.9 130 36.9
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 1.2e-07 60.5 79 49.4
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 2.6e-07 59.3 163 33.7
CSS0008698 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 7.7e-07 57.8 85 42.4
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 3.8e-06 55.5 79 44.3


User provided reference genes

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