Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g010100.4 Solanum lycopersicum HOM05D005486 ORTHO05D007411 1.5e-212 742.7 400 100.0
Sopen05g005890 Solanum pennellii HOM05D005486 ORTHO05D007411 2.7e-193 678.7 377 97.9
PGSC0003DMG400025103 Solanum tuberosum HOM05D005486 ORTHO05D007411 2.2e-179 632.5 381 91.1
CAN.G184.62 Capsicum annuum HOM05D005486 ORTHO05D007411 6.1e-153 544.7 379 81.5
Nitab4.5_0010558g0010 Nicotiana tabacum HOM05D005486 ORTHO05D007411 2.6e-148 529.3 382 78.3
Nitab4.5_0003073g0050 Nicotiana tabacum HOM05D005486 ORTHO05D007411 1.2e-140 503.8 382 75.4
Peaxi162Scf00198g00414 Petunia axillaris HOM05D005486 ORTHO05D007411 1.1e-125 454.1 382 71.7
Dinv16542 Davidia involucrata HOM05D005486 ORTHO05D007411 2.6e-50 203.8 423 38.5
MSTRG.13492 Avicennia marina HOM05D005486 ORTHO05D007411 2.8e-49 200.3 367 42.0
Oeu056581.1 Olea europaea HOM05D005486 ORTHO05D007411 1.9e-45 187.6 368 39.4
Oeu041861.2 Olea europaea HOM05D005486 ORTHO05D007411 4.7e-44 183.0 358 37.4
Cfa008789 Carpinus fangiana HOM05D005486 ORTHO05D007411 1.4e-40 171.4 349 38.7
Potri.010G132600 Populus trichocarpa HOM05D005486 ORTHO05D007411 5.9e-39 166.0 341 37.8
Sabra08G0084000 Salix brachista HOM05D005486 ORTHO05D007411 5.9e-39 166.0 374 35.3
QL03p044642 Quercus lobata HOM05D005486 ORTHO05D007411 5.0e-38 162.9 366 39.3
GSVIVG01012004001 Vitis vinifera HOM05D005486 ORTHO05D007411 6.5e-38 162.5 349 37.2
CSS0021505 Camellia sinensis var. sinensis HOM05D005486 ORTHO05D007411 8.5e-38 162.2 403 36.5
Haze_11801 Corylus avellana HOM05D005486 ORTHO05D007411 1.5e-37 161.4 374 35.8
CiPaw.05G117000 Carya illinoinensis HOM05D005486 ORTHO05D007411 9.4e-37 158.7 342 36.8
Potri.008G111100 Populus trichocarpa HOM05D005486 ORTHO05D007411 1.6e-36 157.9 378 32.8
Rhsim09G0115000 Rhododendron simsii HOM05D005486 ORTHO05D007411 1.6e-36 157.9 304 40.5
Actinidia16599 Actinidia chinensis HOM05D005486 ORTHO05D007411 2.7e-36 157.1 406 34.2
Thecc.02G364500 Theobroma cacao HOM05D005486 ORTHO05D007411 1.0e-35 155.2 336 34.5
TAR629G0806 Trochodendron aralioides HOM05D005486 ORTHO05D007411 1.4e-35 154.8 302 38.1
Duzib251G0619 Durio zibethinus HOM05D005486 ORTHO05D007411 1.8e-35 154.5 341 35.2
TAR622G0197 Trochodendron aralioides HOM05D005486 ORTHO05D007411 2.0e-34 151.0 374 34.0
COL.COLO4_11242 Corchorus olitorius HOM05D005486 ORTHO05D007411 2.6e-34 150.6 331 33.5
TWI31G0478 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 3.7e-33 146.7 370 34.3
Gohir.D12G176000 Gossypium hirsutum HOM05D005486 ORTHO05D007411 8.2e-33 145.6 334 34.7
Gorai.008G188400 Gossypium raimondii HOM05D005486 ORTHO05D007411 8.2e-33 145.6 334 34.7
Prupe.1G301600 Prunus persica HOM05D005486 ORTHO05D007411 8.2e-33 145.6 185 49.7
Sabra10G0101300 Salix brachista HOM05D005486 ORTHO05D007411 1.4e-32 144.8 321 36.1
Nn3g17656 Nelumbo nucifera HOM05D005486 ORTHO05D007411 2.4e-32 144.1 437 33.0
Atru.chr11.1428 Acer truncatum HOM05D005486 ORTHO05D007411 9.1e-32 142.1 332 36.1
Migut.E00279 Erythranthe guttata HOM05D005486 ORTHO05D007411 1.2e-31 141.7 359 34.5
MD13G1050300 Malus domestica HOM05D005486 ORTHO05D007411 3.5e-31 140.2 235 39.1
Gohir.A12G173400 Gossypium hirsutum HOM05D005486 ORTHO05D007411 5.9e-31 139.4 451 31.9
SalBow8G5042 Salvia bowleyana HOM05D005486 ORTHO05D007411 8.5e-30 135.6 398 33.4
DCAR_009846 Daucus carota HOM05D005486 ORTHO05D007411 1.2e-28 131.7 399 30.6
SGA_v2.0_scaffold59G20635 Striga asiatica HOM05D005486 ORTHO05D007411 3.0e-27 127.1 363 33.9
TWI79G0683 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 4.0e-27 126.7 380 31.6
MELO3C012197.2 Cucumis melo HOM05D005486 ORTHO05D007411 1.5e-26 124.8 334 33.8
PGR119G1261 Punica granatum HOM05D005486 ORTHO05D007411 1.5e-26 124.8 200 43.0
Ciclev10030527m.g Citrus clementina HOM05D005486 ORTHO05D007411 3.4e-26 123.6 392 32.9
Manes.06G075700 Manihot esculenta HOM05D005486 ORTHO05D007411 5.7e-26 122.9 376 31.4
Aqoxy3G03843 Aquilegia oxysepala HOM05D005486 ORTHO05D007411 7.5e-26 122.5 201 39.3
FAN17G1167 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.3e-25 121.7 220 39.5
PSO782G0099 Papaver somniferum HOM05D005486 ORTHO05D007411 8.3e-25 119.0 421 29.0
Lj2g0014013 Lotus japonicus HOM05D005486 ORTHO05D007411 2.4e-24 117.5 362 34.0
ClCG00G003720 Citrullus lanatus HOM05D005486 ORTHO05D007411 3.1e-24 117.1 339 33.0
ClCG05G023220 Citrullus lanatus HOM05D005486 ORTHO05D007411 3.1e-24 117.1 339 33.0
MD16G1051000 Malus domestica HOM05D005486 ORTHO05D007411 3.1e-24 117.1 394 31.0
CANSAT64G2054 Cannabis sativa HOM05D005486 ORTHO05D007411 4.1e-24 116.7 338 32.8
Glyma.02G129800 Glycine max HOM05D005486 ORTHO05D007411 5.4e-24 116.3 424 30.4
CARHR061530 Cardamine hirsuta HOM05D005486 ORTHO05D007411 7.0e-24 115.9 333 33.3
CsaV3_5G033800 Cucumis sativus L. HOM05D005486 ORTHO05D007411 1.2e-23 115.2 360 31.4
Eucgr.G02380 Eucalyptus grandis HOM05D005486 ORTHO05D007411 1.2e-23 115.2 385 29.6
Medtr4g012000 Medicago truncatula HOM05D005486 ORTHO05D007411 1.2e-23 115.2 339 33.6
Sc14g0007640 Simmondsia chinensis HOM05D005486 ORTHO05D007411 5.9e-23 112.8 273 36.6
PSO063G5162 Papaver somniferum HOM05D005486 ORTHO05D007411 7.7e-23 112.5 361 32.1
Sed0017603 Sechium edule HOM05D005486 ORTHO05D007411 1.7e-22 111.3 415 30.6
Hma1.2p1_1391F.1_g280160 Hydrangea macrophylla HOM05D005486 ORTHO05D007411 2.2e-22 110.9 150 48.0
BcaB05g24405 Brassica carinata HOM05D005486 ORTHO05D007411 2.9e-22 110.5 342 32.5
Cc11_g10920 Coffea canephora HOM05D005486 ORTHO05D007411 3.8e-22 110.2 201 39.8
AT1G68720 Arabidopsis thaliana HOM05D005486 ORTHO05D007411 1.5e-21 108.2 393 31.0
Phvul.003G024300 Phaseolus vulgaris HOM05D005486 ORTHO05D007411 2.5e-21 107.5 276 33.7
C02p25130 Brassica napus HOM05D005486 ORTHO05D007411 3.2e-21 107.1 374 30.7
RcHm_v2.0_Chr4g0436391 Rosa chinensis HOM05D005486 ORTHO05D007411 3.2e-21 107.1 410 30.5
VMungo1215G0217 Vigna mungo HOM05D005486 ORTHO05D007411 7.2e-21 105.9 403 28.8
ECA234G1298 Erigeron canadensis HOM05D005486 ORTHO05D007411 9.5e-21 105.5 399 32.3
arahy.Tifrunner.gnm1.ann1.HYI70A Arachis hypogaea HOM05D005486 ORTHO05D007411 1.6e-20 104.8 388 29.1
Sp5g23820 Schrenkiella parvula HOM05D005486 ORTHO05D007411 2.1e-20 104.4 357 30.5
BcaC03g14978 Brassica carinata HOM05D005486 ORTHO05D007411 2.8e-20 104.0 374 30.5
BolC2t08592H Brassica oleracea HOM05D005486 ORTHO05D007411 2.8e-20 104.0 374 30.5
Lalb_Chr10g0099591 Lupinus albus HOM05D005486 ORTHO05D007411 2.8e-20 104.0 261 34.5
BraA02t06590Z Brassica rapa HOM05D005486 ORTHO05D007411 3.6e-20 103.6 384 30.7
FAN12G0975 Fragaria x ananassa HOM05D005486 ORTHO05D007411 4.7e-20 103.2 440 28.9
THA.LOC104808436 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 8.0e-20 102.4 340 32.1
Thhalv10018020m.g Eutrema salsugineum HOM05D005486 ORTHO05D007411 1.0e-19 102.1 399 30.1
Glyma.01G092400 Glycine max HOM05D005486 ORTHO05D007411 1.8e-19 101.3 374 31.0
A02p15280 Brassica napus HOM05D005486 ORTHO05D007411 2.3e-19 100.9 374 29.7
Lalb_Chr17g0341801 Lupinus albus HOM05D005486 ORTHO05D007411 4.0e-19 100.1 301 32.6
Carub.0002s1526 Capsella rubella HOM05D005486 ORTHO05D007411 5.2e-19 99.8 383 29.5
Ca_07880_v3 Cicer arietinum L. HOM05D005486 ORTHO05D007411 6.8e-19 99.4 331 31.4
FvH4_4g28440 Fragaria vesca HOM05D005486 ORTHO05D007411 6.8e-19 99.4 440 28.4
arahy.Tifrunner.gnm1.ann1.S5RRBC Arachis hypogaea HOM05D005486 ORTHO05D007411 8.8e-19 99.0 380 28.7
MBI16_g36049_MAGBIO Magnolia biondii HOM05D005486 ORTHO05D007411 8.8e-19 99.0 469 28.6
unitig_27.g25227 Utricularia gibba HOM05D005486 ORTHO05D007411 1.5e-18 98.2 375 29.3
Actinidia32431 Actinidia chinensis HOM05D005486 ORTHO05D007411 3.4e-18 97.1 400 30.2
Aa31sc12G40 Aethionema arabicum HOM05D005486 ORTHO05D007411 5.7e-18 96.3 366 30.1
TPR.G24201 Trifolium pratense HOM05D005486 ORTHO05D007411 1.7e-17 94.7 371 29.6
Psat2g089040 Pisum sativum HOM05D005486 ORTHO05D007411 3.7e-17 93.6 406 28.6
vmacro10503 Vaccinium macrocarpon HOM05D005486 ORTHO05D007411 3.7e-17 93.6 410 31.7
FAN07G1378 Fragaria x ananassa HOM05D005486 ORTHO05D007411 8.3e-17 92.4 435 27.6
FAN22G2135 Fragaria x ananassa HOM05D005486 ORTHO05D007411 3.5e-15 87.0 435 26.9
HanXRQChr08g0214581 Helianthus annuus HOM05D005486 ORTHO05D007411 2.5e-13 80.9 142 44.4
Hund05782 Selenicereus undatus HOM05D005486 ORTHO05D007411 2.5e-13 80.9 188 37.2
HanXRQChr16g0527001 Helianthus annuus HOM05D005486 ORTHO05D007411 8.0e-12 75.9 366 27.9
AUR62002956 Chenopodium quinoa HOM05D005486 ORTHO05D007411 6.8e-11 72.8 430 26.0
EL10Ac6g14546 Beta vulgaris HOM05D005486 ORTHO05D007411 2.2e-09 67.8 424 27.6
AUR62007761 Chenopodium quinoa HOM05D005486 ORTHO05D007411 2.2e-09 67.8 351 26.5
Ah.02g127300 Amaranthus hybridus HOM05D005486 ORTHO05D007411 6.4e-09 66.2 420 26.4
Zm00001eb382160 Zea mays HOM05D005486 ORTHO05D007411 5.4e-08 63.2 296 27.0
ECA233G2219 Erigeron canadensis HOM05D005486 ORTHO05D007411 1.7e-06 58.2 385 27.0
Os06g0489500 Oryza sativa ssp. japonica HOM05D005486 ORTHO05D007411 6.6e-06 56.2 435 23.0


User provided reference genes

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