Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.1e-194 683.3 392 100.0
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 1.3e-187 659.8 363 97.8
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 1.7e-171 606.3 363 91.2
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 7.3e-159 564.3 364 86.8
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 9.9e-148 527.3 365 82.5
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.0e-112 411.0 297 75.8
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 8.2e-110 401.4 296 73.6
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 1.5e-108 397.1 285 75.4
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 3.8e-107 392.5 287 75.3
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 4.2e-106 389.0 308 70.8
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 1.2e-105 387.5 287 73.5
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 2.7e-105 386.3 287 73.2
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 2.3e-104 383.3 204 99.0
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 3.9e-104 382.5 333 63.1
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 9.7e-103 377.9 292 71.6
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 9.7e-103 377.9 294 70.1
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 1.3e-102 377.5 287 71.1
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 6.3e-102 375.2 292 70.5
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.4e-101 374.0 307 66.4
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.8e-101 373.6 295 69.2
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 2.4e-101 373.2 292 69.5
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.1e-101 372.9 324 63.9
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 5.3e-101 372.1 294 66.0
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 6.9e-101 371.7 293 70.6
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 6.9e-101 371.7 296 68.2
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 1.2e-100 370.9 292 70.2
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 1.2e-100 370.9 292 70.2
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.5e-100 370.5 306 66.3
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 3.4e-100 369.4 293 69.3
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 3.4e-100 369.4 292 71.2
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 7.7e-100 368.2 316 64.6
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 7.7e-100 368.2 293 65.5
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 2.2e-99 366.7 241 79.7
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 2.9e-99 366.3 283 69.3
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 3.8e-99 365.9 293 65.2
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 3.8e-99 365.9 331 59.8
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 1.1e-98 364.4 291 68.0
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 1.4e-98 364.0 320 63.4
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 1.4e-98 364.0 289 69.2
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 2.5e-98 363.2 285 68.1
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 4.2e-98 362.5 284 70.1
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 7.2e-98 361.7 235 80.4
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 9.4e-98 361.3 275 66.9
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 2.7e-97 359.8 308 67.9
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 2.7e-97 359.8 288 68.1
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 6.1e-97 358.6 292 70.5
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 7.9e-97 358.2 322 63.0
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 7.9e-97 358.2 294 63.3
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 1.4e-96 357.5 291 66.0
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 1.4e-96 357.5 239 80.3
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 3.9e-96 355.9 287 68.3
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 1.1e-95 354.4 241 77.6
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 5.7e-95 352.1 315 62.5
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 2.8e-94 349.7 285 69.1
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 2.8e-94 349.7 321 60.4
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 4.8e-94 349.0 256 73.8
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.1e-93 347.8 338 58.0
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 1.1e-93 347.8 283 61.5
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.4e-93 347.4 241 78.4
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 1.8e-93 347.1 265 71.3
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 1.2e-92 344.4 291 63.6
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.0e-91 341.3 239 77.0
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.3e-91 340.9 251 70.1
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.7e-91 340.5 239 77.4
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 1.4e-90 337.4 223 82.5
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.5e-90 336.7 224 78.1
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 4.2e-90 335.9 293 64.5
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 5.5e-90 335.5 283 65.4
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 4.7e-89 332.4 234 76.9
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.4e-88 330.9 292 62.7
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 8.8e-88 328.2 229 79.0
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 5.7e-87 325.5 255 72.2
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 9.7e-87 324.7 250 70.4
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.6e-84 317.4 269 66.2
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 3.5e-84 316.2 241 72.6
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 8.8e-80 301.6 259 61.4
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 1.5e-79 300.8 240 69.2
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 4.8e-78 295.8 198 86.4
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 1.1e-74 284.6 219 70.3
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.5e-74 284.3 223 68.2
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 1.1e-69 268.1 339 48.1
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 1.7e-67 260.8 197 74.1
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 3.0e-64 250.0 155 79.4
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 7.0e-61 238.8 161 77.6
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 1.2e-57 228.0 241 56.0
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 2.8e-57 226.9 235 57.0
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 1.7e-54 217.6 186 68.8
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 5.4e-53 212.6 175 71.4
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.4e-40 171.4 259 38.6
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 5.8e-39 166.0 176 55.1
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 7.5e-39 165.6 110 80.0
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.9e-29 134.4 84 77.4
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 5.4e-29 132.9 152 47.4
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.8e-25 120.6 73 93.2
CSS0036326 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 5.3e-08 63.2 94 39.4


User provided reference genes

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