Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 5.7e-65 250.8 126 100.0
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 1.7e-64 249.2 126 99.2
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 4.9e-64 247.7 126 98.4
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 1.8e-58 229.2 126 90.5
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 3.7e-56 221.5 122 86.9
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 4.9e-56 221.1 122 86.9
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 6.4e-56 220.7 123 86.2
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 3.2e-55 218.4 122 85.2
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 7.0e-55 217.2 126 84.9
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 1.6e-54 216.1 122 85.2
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 1.6e-54 216.1 123 84.6
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 1.6e-54 216.1 122 85.2
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 2.0e-54 215.7 122 84.4
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 5.9e-54 214.2 122 84.4
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 7.8e-54 213.8 123 83.7
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 1.3e-53 213.0 122 85.2
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 1.7e-53 212.6 123 83.7
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 2.3e-53 212.2 122 84.4
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 2.9e-53 211.8 124 83.1
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 6.6e-53 210.7 122 82.8
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 8.6e-53 210.3 122 82.0
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 1.9e-52 209.1 126 80.2
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 2.5e-52 208.8 126 80.2
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 2.5e-52 208.8 126 80.2
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.5e-52 208.8 126 80.2
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.5e-52 208.8 126 80.2
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 3.3e-52 208.4 122 82.0
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 4.3e-52 208.0 126 80.2
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 4.3e-52 208.0 122 82.8
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 7.3e-52 207.2 122 82.0
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 7.3e-52 207.2 122 82.0
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 9.5e-52 206.8 122 81.1
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 1.2e-51 206.5 126 77.8
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 1.2e-51 206.5 126 82.5
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 1.6e-51 206.1 120 80.8
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 2.1e-51 205.7 122 79.5
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 3.6e-51 204.9 122 81.1
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 4.7e-51 204.5 122 81.1
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 8.0e-51 203.8 122 80.3
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 1.0e-50 203.4 126 78.6
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.0e-50 203.4 121 78.5
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 1.4e-50 203.0 122 78.7
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 1.4e-50 203.0 121 81.0
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.8e-50 202.6 122 77.9
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 1.8e-50 202.6 125 78.4
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 2.3e-50 202.2 125 76.8
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 3.1e-50 201.8 122 79.5
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 4.0e-50 201.4 122 80.3
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 4.0e-50 201.4 122 80.3
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 4.0e-50 201.4 122 80.3
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 4.0e-50 201.4 122 80.3
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 4.0e-50 201.4 122 80.3
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 4.0e-50 201.4 122 78.7
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 4.0e-50 201.4 126 78.6
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 5.2e-50 201.1 122 77.9
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 5.2e-50 201.1 126 78.6
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 6.8e-50 200.7 122 79.5
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 8.9e-50 200.3 122 79.5
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 8.9e-50 200.3 126 77.0
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 1.2e-49 199.9 122 79.5
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 1.2e-49 199.9 121 80.2
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.2e-49 199.9 122 78.7
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 1.5e-49 199.5 122 79.5
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 1.5e-49 199.5 119 81.5
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 1.5e-49 199.5 126 75.4
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 1.5e-49 199.5 122 79.5
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 4.4e-49 198.0 126 75.4
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 4.4e-49 198.0 123 76.4
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 5.8e-49 197.6 123 77.2
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 9.8e-49 196.8 126 77.8
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 1.3e-48 196.4 123 77.2
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 1.3e-48 196.4 122 78.7
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 1.7e-48 196.1 119 79.0
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 1.7e-48 196.1 122 78.7
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 2.9e-48 195.3 123 76.4
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 2.9e-48 195.3 126 77.8
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 3.7e-48 194.9 123 77.2
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 4.9e-48 194.5 122 77.0
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 4.9e-48 194.5 154 65.6
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 4.9e-48 194.5 122 76.2
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 1.1e-47 193.4 120 79.2
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 1.1e-47 193.4 122 75.4
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 1.1e-47 193.4 126 81.0
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 1.9e-47 192.6 122 77.0
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 2.4e-47 192.2 110 82.7
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 3.2e-47 191.8 119 75.6
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 3.2e-47 191.8 122 76.2
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 4.1e-47 191.4 126 80.2
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 4.1e-47 191.4 122 76.2
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 5.4e-47 191.0 122 76.2
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 9.2e-47 190.3 123 74.8
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 1.2e-46 189.9 122 77.0
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 2.7e-46 188.7 122 73.8
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 2.7e-46 188.7 123 74.0
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 4.6e-46 188.0 123 71.5
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 6.0e-46 187.6 119 73.9
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 6.0e-46 187.6 109 82.6
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 6.0e-46 187.6 121 74.4
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.0e-45 186.8 120 74.2
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 1.0e-45 186.8 120 74.2
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 3.0e-45 185.3 122 74.6
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 3.9e-45 184.9 126 76.2
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 5.6e-44 181.0 123 70.7
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 5.6e-44 181.0 123 73.2
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 7.3e-44 180.6 123 74.0
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 1.2e-43 179.9 129 68.2
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.6e-43 179.5 123 73.2
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 4.7e-43 177.9 122 70.5
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 6.2e-43 177.6 122 71.3
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 1.8e-42 176.0 126 65.1
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 3.1e-42 175.3 122 68.9
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 5.2e-42 174.5 121 68.6
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 6.8e-42 174.1 121 67.8
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 2.0e-41 172.6 122 67.2
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 4.9e-40 167.9 121 67.8
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 6.4e-40 167.5 122 66.4
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 8.3e-40 167.2 121 69.4
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 1.4e-39 166.4 121 66.9
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 1.9e-39 166.0 122 66.4
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 2.4e-39 165.6 122 66.4
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 3.5e-38 161.8 122 66.4
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 1.3e-37 159.8 126 69.8
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 6.6e-37 157.5 108 74.1
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 4.3e-36 154.8 122 61.5
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 1.2e-35 153.3 95 76.8
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 1.6e-35 152.9 94 84.0
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 2.1e-35 152.5 103 69.9
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 1.8e-34 149.4 128 64.1
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 1.5e-33 146.4 110 65.5
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 1.9e-31 139.4 119 53.8
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 2.4e-31 139.0 127 65.4
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 4.6e-30 134.8 83 77.1
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 6.2e-27 124.4 121 56.2
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 1.1e-26 123.6 122 48.4
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 3.1e-26 122.1 83 74.7
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 5.2e-26 121.3 62 91.9
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 9.9e-25 117.1 123 54.5
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 1.9e-23 112.8 82 70.7
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 4.2e-23 111.7 60 85.0
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 2.7e-22 109.0 100 61.0
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 1.3e-21 106.7 85 61.2
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 3.9e-21 105.1 93 57.0
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 2.8e-19 99.0 67 70.1
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 7.6e-17 90.9 78 64.1
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 2.9e-16 89.0 57 75.4
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 3.5e-14 82.0 103 49.5
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 2.1e-11 72.8 107 40.2
C09p72490 Brassica napus HOM05D004883 ORTHO05D005766 1.8e-10 69.7 47 70.2
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.7e-08 63.2 112 38.4
MELO3C033382.2 Cucumis melo HOM05D004883 ORTHO05D005766 4.9e-08 61.6 40 70.0
Cre14.g633550 Chlamydomonas reinhardtii HOM05D004883 ORTHO05D005766 9.3e-07 57.4 110 35.5


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