Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g056510.1 Solanum lycopersicum HOM05D003027 ORTHO05D003455 5.1e-31 137.1 69 100.0
Sopen04g025410 Solanum pennellii HOM05D003027 ORTHO05D003455 3.8e-18 94.4 57 84.2
Sopen04g022340 Solanum pennellii HOM05D003027 ORTHO05D003455 5.4e-17 90.5 57 80.7
Solyc04g056490.3 Solanum lycopersicum HOM05D003027 ORTHO05D003455 2.7e-16 88.2 57 80.7
Solyc04g051040.1 Solanum lycopersicum HOM05D003027 ORTHO05D003455 8.7e-15 83.2 57 73.7
PGSC0003DMG400044159 Solanum tuberosum HOM05D003027 ORTHO05D003455 1.5e-11 72.4 48 72.9
CAN.G960.76 Capsicum annuum HOM05D003027 ORTHO05D003455 1.3e-10 69.3 56 67.9
Solyc04g051060.2 Solanum lycopersicum HOM05D003027 ORTHO05D003455 1.3e-10 69.3 45 80.0
Nitab4.5_0005963g0050 Nicotiana tabacum HOM05D003027 ORTHO05D003455 2.2e-10 68.6 56 69.6
Nitab4.5_0000869g0140 Nicotiana tabacum HOM05D003027 ORTHO05D003455 6.4e-10 67.0 54 70.4
Peaxi162Scf00003g05235 Petunia axillaris HOM05D003027 ORTHO05D003455 6.4e-10 67.0 55 67.3
Sopen10g028950 Solanum pennellii HOM05D003027 ORTHO05D003455 8.4e-10 66.6 56 66.1
Peaxi162Scf00076g00222 Petunia axillaris HOM05D003027 ORTHO05D003455 1.1e-09 66.2 56 67.9
CAN.G569.64 Capsicum annuum HOM05D003027 ORTHO05D003455 1.9e-09 65.5 54 70.4
PGSC0003DMG400007175 Solanum tuberosum HOM05D003027 ORTHO05D003455 4.2e-09 64.3 56 64.3
PGSC0003DMG400044241 Solanum tuberosum HOM05D003027 ORTHO05D003455 9.3e-09 63.2 42 78.6
PGSC0003DMG400034669 Solanum tuberosum HOM05D003027 ORTHO05D003455 1.2e-08 62.8 59 54.2
Sopen04g025360 Solanum pennellii HOM05D003027 ORTHO05D003455 2.7e-08 61.6 58 58.6
DCAR_013537 Daucus carota HOM05D003027 ORTHO05D003455 4.6e-08 60.8 58 62.1
SGA_v2.0_scaffold66G22290 Striga asiatica HOM05D003027 ORTHO05D003455 6.0e-08 60.5 37 78.4
Dinv36122 Davidia involucrata HOM05D003027 ORTHO05D003455 7.9e-08 60.1 52 65.4
Migut.J01624 Erythranthe guttata HOM05D003027 ORTHO05D003455 7.9e-08 60.1 39 76.9
PSO339G5716 Papaver somniferum HOM05D003027 ORTHO05D003455 7.9e-08 60.1 37 73.0
PSO384G3381 Papaver somniferum HOM05D003027 ORTHO05D003455 7.9e-08 60.1 37 73.0
PGSC0003DMG400039820 Solanum tuberosum HOM05D003027 ORTHO05D003455 7.9e-08 60.1 53 60.4
unitig_744.g24169 Utricularia gibba HOM05D003027 ORTHO05D003455 7.9e-08 60.1 38 71.1
CSS0031087 Camellia sinensis var. sinensis HOM05D003027 ORTHO05D003455 1.0e-07 59.7 36 77.8
Oeu044242.3 Olea europaea HOM05D003027 ORTHO05D003455 1.0e-07 59.7 54 63.0
Aqoxy1G00075 Aquilegia oxysepala HOM05D003027 ORTHO05D003455 1.3e-07 59.3 53 66.0
EL10Ac3g07277 Beta vulgaris HOM05D003027 ORTHO05D003455 1.3e-07 59.3 52 65.4
Dinv20764 Davidia involucrata HOM05D003027 ORTHO05D003455 1.3e-07 59.3 54 61.1
unitig_21.g20679 Utricularia gibba HOM05D003027 ORTHO05D003455 1.3e-07 59.3 37 73.0
Sc25g0005470 Simmondsia chinensis HOM05D003027 ORTHO05D003455 1.8e-07 58.9 52 65.4
Dinv20757 Davidia involucrata HOM05D003027 ORTHO05D003455 2.3e-07 58.5 56 58.9
SGA_v2.0_scaffold69G23173 Striga asiatica HOM05D003027 ORTHO05D003455 3.9e-07 57.8 37 75.7
vmacro08992 Vaccinium macrocarpon HOM05D003027 ORTHO05D003455 3.9e-07 57.8 56 62.5
GSVIVG01025788001 Vitis vinifera HOM05D003027 ORTHO05D003455 3.9e-07 57.8 38 71.1
MSTRG.26171 Avicennia marina HOM05D003027 ORTHO05D003455 5.1e-07 57.4 53 64.2
MSTRG.6308 Avicennia marina HOM05D003027 ORTHO05D003455 8.7e-07 56.6 35 77.1
SalBow1G6916 Salvia bowleyana HOM05D003027 ORTHO05D003455 8.7e-07 56.6 53 64.2
MSTRG.19782 Avicennia marina HOM05D003027 ORTHO05D003455 1.1e-06 56.2 36 75.0
Migut.K00152 Erythranthe guttata HOM05D003027 ORTHO05D003455 1.1e-06 56.2 55 63.6
Solyc04g056460.2 Solanum lycopersicum HOM05D003027 ORTHO05D003455 1.1e-06 56.2 61 50.8
SGA_v2.0_scaffold106G30539 Striga asiatica HOM05D003027 ORTHO05D003455 1.1e-06 56.2 53 64.2
TAR623G0586 Trochodendron aralioides HOM05D003027 ORTHO05D003455 1.1e-06 56.2 54 61.1
Cc06_g20180 Coffea canephora HOM05D003027 ORTHO05D003455 1.9e-06 55.5 54 59.3
SalBow6G5171 Salvia bowleyana HOM05D003027 ORTHO05D003455 1.9e-06 55.5 41 65.9
Ah.13g077130 Amaranthus hybridus HOM05D003027 ORTHO05D003455 2.5e-06 55.1 54 61.1
DCAR_020597 Daucus carota HOM05D003027 ORTHO05D003455 3.3e-06 54.7 58 55.2
Dinv20756 Davidia involucrata HOM05D003027 ORTHO05D003455 7.4e-06 53.5 54 55.6
ECA248G3907 Erigeron canadensis HOM05D003027 ORTHO05D003455 7.4e-06 53.5 41 63.4
Lj1A1084T71 Lonicera japonica HOM05D003027 ORTHO05D003455 7.4e-06 53.5 37 67.6
THA.LOC104803232 Tarenaya hassleriana HOM05D003027 ORTHO05D003455 9.6e-06 53.1 40 57.5


User provided reference genes

Program Settings