Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g049980.1 Solanum lycopersicum HOM05D001760 ORTHO05D001691 2.3e-67 258.8 136 100.0
Sopen04g020630 Solanum pennellii HOM05D001760 ORTHO05D001691 1.1e-53 213.4 135 85.9
PGSC0003DMG400017970 Solanum tuberosum HOM05D001760 ORTHO05D001691 1.6e-36 156.4 136 66.2
Sopen12g034620 Solanum pennellii HOM05D001760 ORTHO05D001691 1.0e-35 153.7 133 66.2
Nitab4.5_0001925g0230 Nicotiana tabacum HOM05D001760 ORTHO05D001691 3.9e-35 151.8 137 66.4
Nitab4.5_0002757g0030 Nicotiana tabacum HOM05D001760 ORTHO05D001691 3.3e-34 148.7 137 65.0
Solyc12g100000.3 Solanum lycopersicum HOM05D001760 ORTHO05D001691 1.3e-33 146.7 134 63.4
Peaxi162Scf00062g00922 Petunia axillaris HOM05D001760 ORTHO05D001691 4.6e-28 128.3 137 56.9
Nitab4.5_0009016g0010 Nicotiana tabacum HOM05D001760 ORTHO05D001691 5.7e-26 121.3 127 55.1
Nitab4.5_0000023g0170 Nicotiana tabacum HOM05D001760 ORTHO05D001691 7.4e-26 120.9 127 56.7
Peaxi162Scf00968g00210 Petunia axillaris HOM05D001760 ORTHO05D001691 8.2e-25 117.5 131 58.0
Sopen01g008310 Solanum pennellii HOM05D001760 ORTHO05D001691 3.1e-24 115.5 149 50.3
Solyc01g014230.4 Solanum lycopersicum HOM05D001760 ORTHO05D001691 1.5e-23 113.2 149 49.7
PGSC0003DMG400010570 Solanum tuberosum HOM05D001760 ORTHO05D001691 1.1e-18 97.1 110 55.5
CAN.G442.7 Capsicum annuum HOM05D001760 ORTHO05D001691 4.8e-17 91.7 199 40.2
Dinv30055 Davidia involucrata HOM05D001760 ORTHO05D001691 1.5e-15 86.7 146 45.9
Dinv26889 Davidia involucrata HOM05D001760 ORTHO05D001691 1.4e-13 80.1 146 41.8
Cc07_g06640 Coffea canephora HOM05D001760 ORTHO05D001691 1.9e-13 79.7 148 42.6
DCAR_025771 Daucus carota HOM05D001760 ORTHO05D001691 3.6e-12 75.5 145 39.3
Hma1.2p1_0017F.1_g012010 Hydrangea macrophylla HOM05D001760 ORTHO05D001691 1.8e-11 73.2 154 40.3
CSS0008219 Camellia sinensis var. sinensis HOM05D001760 ORTHO05D001691 5.1e-11 71.6 146 40.4
Oeu001191.1 Olea europaea HOM05D001760 ORTHO05D001691 7.4e-10 67.8 141 41.8
Oeu023079.1 Olea europaea HOM05D001760 ORTHO05D001691 1.3e-09 67.0 148 38.5
Actinidia07395 Actinidia chinensis HOM05D001760 ORTHO05D001691 2.4e-08 62.8 146 38.4
CSS0010960 Camellia sinensis var. sinensis HOM05D001760 ORTHO05D001691 7.0e-08 61.2 143 37.1
CSS0017472 Camellia sinensis var. sinensis HOM05D001760 ORTHO05D001691 7.0e-08 61.2 143 37.1
Lj7C86G4 Lonicera japonica HOM05D001760 ORTHO05D001691 1.2e-07 60.5 134 37.3
Actinidia12004 Actinidia chinensis HOM05D001760 ORTHO05D001691 2.0e-07 59.7 146 37.7
Atru.chr3.218 Acer truncatum HOM05D001760 ORTHO05D001691 2.6e-07 59.3 150 35.3
Atru.chr3.229 Acer truncatum HOM05D001760 ORTHO05D001691 2.6e-07 59.3 150 35.3
COL.COLO4_11514 Corchorus olitorius HOM05D001760 ORTHO05D001691 3.4e-07 58.9 148 36.5
Hma1.2p1_0239F.1_g099870 Hydrangea macrophylla HOM05D001760 ORTHO05D001691 3.4e-07 58.9 116 43.1
Thecc.01G066800 Theobroma cacao HOM05D001760 ORTHO05D001691 7.7e-07 57.8 143 37.1
MSTRG.1787 Avicennia marina HOM05D001760 ORTHO05D001691 1.0e-06 57.4 152 36.8
Manes.12G109600 Manihot esculenta HOM05D001760 ORTHO05D001691 1.7e-06 56.6 146 36.3
Cfa004085 Carpinus fangiana HOM05D001760 ORTHO05D001691 3.8e-06 55.5 148 36.5
THA.LOC104807616 Tarenaya hassleriana HOM05D001760 ORTHO05D001691 3.8e-06 55.5 108 38.0
TAR626G1413 Trochodendron aralioides HOM05D001760 ORTHO05D001691 8.5e-06 54.3 144 31.9


User provided reference genes

Program Settings