Gene: Sopen04g020630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g020630
  • Transcript Identifier Sopen04g020630.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 54260702-54261529 : positive

Gene Family Information

  • ID HOM05D001760
  • #Genes/#Species 369/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g020630.1

Descriptions

  • Description RING/U-box superfamily protein with ARM repeat domain | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: protein ubiquitination | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein ., Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11) - Oryza sativa (Rice)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D001760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
ISO
PLAZA Homology (enrichment)ubiquitin-protein transferase activity HOM05D001760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000225 Armadillo
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
Mapman id Description
35.1 not assigned.annotated