Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 5.7e-283 976.9 472 100.0
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 3.6e-277 957.6 472 97.7
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 1.4e-244 849.4 472 85.4
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 9.9e-219 763.5 472 80.3
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 7.8e-208 727.2 488 74.0
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 6.4e-186 654.4 464 65.9
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 5.5e-185 651.4 463 66.7
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 9.3e-185 650.6 464 65.1
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.6e-184 648.3 464 66.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.0e-183 647.1 464 65.7
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 2.3e-183 646.0 464 65.9
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 3.0e-183 645.6 460 67.2
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 4.3e-182 641.7 460 66.3
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 5.6e-182 641.3 488 63.5
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 7.4e-182 641.0 464 65.1
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.3e-181 640.2 464 65.1
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 1.6e-181 639.8 463 65.0
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.8e-181 639.0 464 65.7
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 6.2e-181 637.9 464 64.9
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 6.2e-181 637.9 464 65.5
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.1e-180 637.1 464 64.4
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.1e-180 637.1 463 65.4
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 3.1e-180 635.6 464 65.5
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 5.3e-180 634.8 464 63.8
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 5.3e-180 634.8 426 74.9
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 9.0e-180 634.0 464 64.2
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 2.0e-179 632.9 464 65.5
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 3.4e-179 632.1 464 65.7
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 3.4e-179 632.1 461 65.3
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 7.6e-179 630.9 464 64.7
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 7.6e-179 630.9 464 64.2
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.0e-178 630.6 460 64.6
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-178 630.2 464 64.7
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.3e-178 630.2 461 64.4
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 1.7e-178 629.8 435 69.2
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 4.9e-178 628.2 464 63.6
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 4.9e-178 628.2 466 63.9
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 4.9e-178 628.2 464 64.2
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 6.5e-178 627.9 457 65.9
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.1e-177 627.1 464 64.2
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 2.5e-177 625.9 463 64.4
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 3.2e-177 625.5 463 64.4
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 3.2e-177 625.5 463 64.6
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 7.1e-177 624.4 464 64.2
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.6e-176 623.2 464 63.1
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 2.1e-176 622.9 460 64.3
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 2.7e-176 622.5 463 64.4
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.5e-176 622.1 464 63.6
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.5e-176 622.1 484 61.8
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 3.5e-176 622.1 462 63.0
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 6.0e-176 621.3 462 63.0
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 1.3e-175 620.2 461 62.9
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.8e-175 619.8 464 63.1
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 6.7e-175 617.8 460 64.6
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.1e-174 617.1 464 62.9
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 4.3e-174 615.1 460 64.6
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 7.4e-174 614.4 471 61.4
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 7.4e-174 614.4 460 64.6
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 1.6e-173 613.2 464 64.2
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 1.6e-173 613.2 462 63.2
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 8.2e-173 610.9 460 62.8
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 8.2e-173 610.9 460 63.7
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 2.4e-172 609.4 538 56.7
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 4.1e-172 608.6 458 62.4
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 6.9e-172 607.8 419 69.9
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 9.0e-172 607.4 464 62.9
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 2.0e-171 606.3 461 62.3
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 2.6e-171 605.9 487 61.0
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 2.6e-171 605.9 464 61.0
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 4.5e-171 605.1 464 60.8
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 4.5e-171 605.1 538 56.3
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 7.6e-171 604.4 461 62.9
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 2.2e-170 602.8 458 62.2
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 2.9e-170 602.4 464 61.0
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 3.8e-170 602.1 460 62.2
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 6.5e-170 601.3 487 62.0
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 1.4e-169 600.1 462 61.3
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 1.9e-169 599.7 464 61.2
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 2.5e-169 599.4 464 60.6
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 5.5e-169 598.2 464 61.0
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.2e-168 597.0 460 62.0
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.6e-168 596.7 464 60.3
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.6e-168 596.7 442 64.3
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 7.9e-168 594.3 464 60.6
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 7.9e-168 594.3 440 63.0
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.4e-167 593.6 573 53.4
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 1.8e-167 593.2 464 60.6
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 2.3e-167 592.8 480 59.6
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 3.9e-167 592.0 463 60.3
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 5.1e-167 591.7 463 60.9
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 5.1e-167 591.7 464 60.8
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 8.8e-167 590.9 458 60.9
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 3.3e-166 589.0 435 64.4
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 4.3e-166 588.6 464 59.7
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 5.7e-166 588.2 458 60.7
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 7.4e-166 587.8 436 65.4
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 2.8e-165 585.9 464 60.3
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 3.7e-165 585.5 464 60.6
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.1e-164 583.9 457 62.8
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 1.4e-164 583.6 464 60.3
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.1e-164 582.4 458 60.3
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 4.1e-164 582.0 464 60.3
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.5e-163 580.1 457 61.5
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 5.9e-163 578.2 464 59.9
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 1.0e-162 577.4 464 59.9
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 3.8e-162 575.5 462 60.2
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.9e-161 573.2 464 59.9
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 1.6e-160 570.1 482 56.4
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 7.9e-160 567.8 462 59.5
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.0e-158 563.1 586 51.9
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 4.4e-158 562.0 383 69.7
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 5.7e-158 561.6 420 62.6
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 7.4e-158 561.2 461 59.9
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 7.4e-158 561.2 456 60.1
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 2.9e-154 549.3 420 61.9
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 4.7e-152 542.0 457 58.2
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 8.8e-151 537.7 440 60.0
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 1.2e-147 527.3 461 56.0
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 2.1e-144 516.5 463 53.8
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.5e-142 510.4 346 69.7
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 2.7e-131 473.0 353 65.7
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 1.7e-125 453.8 466 51.7
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 1.7e-122 443.7 461 49.2
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.6e-115 420.6 311 65.3
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 2.1e-99 367.1 270 64.8
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 3.6e-96 356.3 314 57.0
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 5.2e-95 352.4 500 40.4
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 9.9e-94 348.2 255 63.9
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.8e-85 319.7 258 59.7
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 1.4e-76 291.2 197 68.0
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 5.6e-73 279.3 326 47.5
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 3.1e-71 273.5 242 55.8
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 1.8e-66 257.7 251 50.6
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 5.8e-62 242.7 214 53.7
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 5.9e-54 216.1 139 72.7
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 2.1e-51 207.6 162 61.1
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 7.0e-39 166.0 143 55.9
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 4.5e-38 163.3 184 50.0
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 6.1e-35 152.9 100 75.0
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 3.3e-33 147.1 93 69.9
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.2e-29 134.4 112 56.2
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 4.1e-23 113.6 117 50.4
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 3.8e-21 107.1 172 40.7
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.2e-20 103.6 95 56.8
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 5.0e-13 80.1 112 44.6
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 6.6e-13 79.7 57 56.1
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 1.4e-10 72.0 56 58.9
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.4e-10 72.0 62 59.7
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 2.8e-08 64.3 48 64.6
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 2.8e-08 64.3 48 64.6
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 7.8e-06 56.2 54 59.3


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