Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g098530.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 3.9e-165 584.7 297 100.0
Sopen03g029250 Solanum pennellii HOM05D010102 ORTHO05D012244 1.5e-140 503.1 283 90.8
Solyc03g098540.2 Solanum lycopersicum HOM05D010102 ORTHO05D012244 3.8e-99 365.5 343 57.4
Sopen03g029260 Solanum pennellii HOM05D010102 ORTHO05D012244 2.1e-94 349.7 330 59.1
Sopen03g029270 Solanum pennellii HOM05D010102 ORTHO05D012244 1.8e-93 346.7 328 58.2
Solyc03g098545.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 2.6e-92 342.8 326 58.0
Solyc03g098535.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 7.6e-92 341.3 326 57.7
Nitab4.5_0008408g0020 Nicotiana tabacum HOM05D010102 ORTHO05D012244 3.4e-39 166.4 310 39.0
PGSC0003DMG400010179 Solanum tuberosum HOM05D010102 ORTHO05D012244 4.4e-39 166.0 129 69.8
Solyc03g098560.2 Solanum lycopersicum HOM05D010102 ORTHO05D012244 3.8e-35 152.9 204 44.6
Nitab4.5_0003040g0140 Nicotiana tabacum HOM05D010102 ORTHO05D012244 3.2e-34 149.8 280 38.9
Solyc03g098520.1 Solanum lycopersicum HOM05D010102 ORTHO05D012244 2.7e-33 146.7 118 65.3
Nitab4.5_0000782g0120 Nicotiana tabacum HOM05D010102 ORTHO05D012244 5.2e-32 142.5 267 39.0
Sopen00g010850 Solanum pennellii HOM05D010102 ORTHO05D012244 1.4e-29 134.4 86 83.7
Sopen03g029240 Solanum pennellii HOM05D010102 ORTHO05D012244 1.1e-21 108.2 92 54.3
Nitab4.5_0006900g0020 Nicotiana tabacum HOM05D010102 ORTHO05D012244 9.8e-15 85.1 113 44.2
Nitab4.5_0000068g0060 Nicotiana tabacum HOM05D010102 ORTHO05D012244 6.4e-14 82.4 108 43.5
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-12 76.3 102 42.2
Nitab4.5_0003040g0170 Nicotiana tabacum HOM05D010102 ORTHO05D012244 7.8e-12 75.5 69 55.1
Sopen12g010870 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-11 73.2 102 41.2
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.9e-10 70.9 115 35.7
Ah.07g201970 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.3e-10 68.9 115 35.7
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.1e-09 67.4 114 33.3
CAN.G370.89 Capsicum annuum HOM05D000004 ORTHO05D000002 6.2e-09 65.9 88 42.0
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 1.1e-08 65.1 102 38.2
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-08 65.1 102 38.2
ECA240G1722 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-08 64.7 167 28.7
Atru.chr3.1971 Acer truncatum HOM05D000004 ORTHO05D000002 5.2e-08 62.8 98 32.7
Atru.chr3.1984 Acer truncatum HOM05D000004 ORTHO05D000002 5.2e-08 62.8 98 32.7
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.2e-08 62.8 137 30.7
CAN.G1408.1 Capsicum annuum HOM05D000004 ORTHO05D000002 6.8e-08 62.4 106 36.8
COL.COLO4_08211 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.8e-08 62.4 99 35.4
Lj2C174T26 Lonicera japonica HOM05D000004 ORTHO05D000002 6.8e-08 62.4 105 33.3
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 8.9e-08 62.0 120 33.3
AUR62043028 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.9e-08 62.0 115 33.9
Nn2g14341 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.9e-08 62.0 114 31.6
Nn2g15711 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.2e-07 61.6 136 30.9
Sopen07g020790 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-07 61.6 77 40.3
Hma1.2p1_0487F.1_g163610 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.5e-07 61.2 147 29.3
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.5e-07 61.2 103 35.9
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 2.0e-07 60.8 101 37.6
CAN.G174.4 Capsicum annuum HOM05D000004 ORTHO05D000002 3.4e-07 60.1 104 35.6
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.4e-07 59.7 102 34.3
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 9.8e-07 58.5 107 36.4
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 9.8e-07 58.5 99 34.3
AUR62003850 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.3e-06 58.2 136 33.1
ECA247G3748 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-06 57.4 288 27.1
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-06 57.0 158 31.0
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.9e-06 57.0 125 33.6
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 2.9e-06 57.0 117 33.3
Ah.06g187770 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.7e-06 56.6 88 36.4
Lalb_Chr01g0016101 Lupinus albus HOM05D000004 ORTHO05D000002 3.7e-06 56.6 107 32.7
PSO384G4983 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-06 56.2 90 36.7
TPR.G18808 Trifolium pratense HOM05D004761 ORTHO05D000002 4.9e-06 56.2 89 37.1
Psat2g047800 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-06 55.8 100 32.0
PSO063G0403 Papaver somniferum HOM05D000004 ORTHO05D000002 8.3e-06 55.5 155 24.5


User provided reference genes

Program Settings