Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g083200.4 Solanum lycopersicum HOM05D001081 ORTHO05D020818 8.4e-38 159.8 80 100.0
Sopen03g022640 Solanum pennellii HOM05D001081 ORTHO05D020818 2.1e-28 128.6 70 91.4
Solyc03g083130.3 Solanum lycopersicum HOM05D001081 ORTHO05D004708 2.3e-27 125.2 83 77.1
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 2.3e-27 125.2 83 77.1
Sopen03g022940 Solanum pennellii HOM05D001081 ORTHO05D003320 8.8e-27 123.2 83 77.1
Solyc03g083170.3 Solanum lycopersicum HOM05D001081 ORTHO05D003320 2.0e-26 122.1 83 75.9
Sopen03g022630 Solanum pennellii HOM05D001081 ORTHO05D003320 2.0e-26 122.1 83 75.9
Sopen03g022960 Solanum pennellii HOM05D001081 ORTHO05D003320 2.5e-26 121.7 83 75.9
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 1.5e-23 112.5 83 71.1
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 1.7e-22 109.0 83 67.5
Nitab4.5_0006933g0030 Nicotiana tabacum HOM05D001081 ORTHO05D004708 3.8e-22 107.8 83 68.7
Solyc03g083180.1 Solanum lycopersicum HOM05D050483 ORTHO05D020818 1.2e-20 102.8 87 66.7
PGSC0003DMG400009131 Solanum tuberosum HOM05D001081 ORTHO05D020818 1.3e-17 92.8 54 85.2
Sopen03g022950 Solanum pennellii HOM05D001081 ORTHO05D020818 3.1e-16 88.2 78 62.8
Peaxi162Scf00740g00138 Petunia axillaris HOM05D001081 ORTHO05D004708 3.0e-11 71.6 71 49.3
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 8.8e-11 70.1 76 48.7
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 8.8e-11 70.1 76 48.7
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 7.5e-10 67.0 76 46.1
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.3e-09 66.2 73 46.6
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.7e-09 65.9 70 47.1
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 2.2e-09 65.5 70 48.6
Hma1.2p1_0003F.1_g003770 Hydrangea macrophylla HOM05D001081 ORTHO05D003320 2.8e-09 65.1 76 48.7
Hma1.2p1_2672F.1_g326680 Hydrangea macrophylla HOM05D001081 ORTHO05D020818 2.4e-08 62.0 75 48.0
Hma1.2p1_0351F.1_g132830 Hydrangea macrophylla HOM05D001081 ORTHO05D020818 4.1e-08 61.2 75 48.0
Hma1.2p1_0404F.1_g145360 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 4.1e-08 61.2 75 46.7
Cc02_g01510 Coffea canephora HOM05D001081 ORTHO05D004708 7.0e-08 60.5 73 42.5
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 7.0e-08 60.5 70 40.0
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 7.0e-08 60.5 79 41.8
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 1.2e-07 59.7 76 46.1
COL.COLO4_16768 Corchorus olitorius HOM05D001081 ORTHO05D004708 4.5e-07 57.8 76 43.4
Duzib205G0300 Durio zibethinus HOM05D001081 ORTHO05D003320 1.7e-06 55.8 76 44.7
CiPaw.06G046000 Carya illinoinensis HOM05D001081 ORTHO05D004708 2.2e-06 55.5 76 42.1
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 3.8e-06 54.7 73 46.6
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 5.0e-06 54.3 68 41.2
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 5.0e-06 54.3 70 37.1
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 5.0e-06 54.3 76 40.8
Medtr1g007990 Medicago truncatula HOM05D001081 ORTHO05D004708 6.5e-06 53.9 68 44.1
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 8.5e-06 53.5 76 36.8
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 8.5e-06 53.5 76 36.8
FAN03G0095 Fragaria x ananassa HOM05D001081 ORTHO05D004708 8.5e-06 53.5 70 37.1


User provided reference genes

Program Settings