Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 8.4e-88 327.0 168 100.0
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 8.7e-85 317.0 168 97.0
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 1.5e-84 316.2 172 96.5
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.2e-81 306.6 168 92.9
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 9.9e-81 303.5 172 91.3
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 4.1e-66 255.0 142 93.7
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.1e-58 230.3 157 75.8
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 1.4e-58 229.9 164 70.7
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 3.1e-58 228.8 144 78.5
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 2.5e-55 219.2 167 65.9
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 9.4e-55 217.2 111 96.4
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 1.4e-50 203.4 172 64.0
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 3.1e-50 202.2 166 66.9
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 4.1e-50 201.8 166 66.3
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 4.1e-50 201.8 167 65.9
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.2e-49 200.3 142 71.1
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 4.5e-49 198.4 166 66.9
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 4.5e-49 198.4 156 67.3
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 7.7e-49 197.6 138 71.7
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 1.0e-48 197.2 128 77.3
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 3.8e-48 195.3 170 64.1
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 8.5e-48 194.1 161 63.4
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 2.5e-47 192.6 160 65.0
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 3.2e-47 192.2 137 71.5
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 5.5e-47 191.4 136 71.3
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 7.2e-47 191.0 167 64.7
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.2e-46 190.3 137 70.1
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.6e-46 189.9 164 62.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 2.1e-46 189.5 160 63.8
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 2.1e-46 189.5 161 62.1
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 2.7e-46 189.1 170 58.2
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 4.7e-46 188.3 158 61.4
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 4.7e-46 188.3 167 63.5
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.0e-45 187.2 166 63.3
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 1.0e-45 187.2 160 63.1
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 1.8e-45 186.4 132 70.5
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 2.3e-45 186.0 166 62.0
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 2.3e-45 186.0 128 72.7
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 3.0e-45 185.7 170 60.0
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 3.0e-45 185.7 167 61.7
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 3.9e-45 185.3 197 57.4
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 3.9e-45 185.3 120 75.8
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 5.1e-45 184.9 165 60.0
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 8.8e-45 184.1 165 59.4
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 1.5e-44 183.3 129 70.5
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.5e-44 183.3 124 75.8
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 2.0e-44 183.0 174 57.5
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 2.6e-44 182.6 108 80.6
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 4.4e-44 181.8 170 60.0
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 5.7e-44 181.4 168 61.9
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 7.4e-44 181.0 109 80.7
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 7.4e-44 181.0 134 67.9
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 7.4e-44 181.0 163 58.9
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.7e-43 179.9 170 55.9
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 6.3e-43 177.9 137 67.9
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 6.3e-43 177.9 108 79.6
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.1e-42 177.2 109 78.9
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 3.1e-42 175.6 165 61.2
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 5.3e-42 174.9 165 57.6
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 7.0e-42 174.5 161 57.8
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 4.5e-41 171.8 136 62.5
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.0e-40 170.6 141 61.0
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 1.0e-40 170.6 157 58.0
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 1.3e-40 170.2 141 61.0
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 1.3e-40 170.2 141 61.0
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.3e-40 170.2 141 61.0
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.7e-40 169.9 165 56.4
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.7e-40 169.9 169 51.5
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 2.9e-40 169.1 145 58.6
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 2.9e-40 169.1 108 75.9
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 5.0e-40 168.3 158 55.7
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 6.5e-40 167.9 115 69.6
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 8.5e-40 167.5 157 54.8
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 1.1e-39 167.2 162 53.7
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.9e-39 166.4 99 80.8
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 5.5e-39 164.9 108 73.1
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.6e-38 163.3 161 55.3
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.6e-38 163.3 107 72.9
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 6.1e-38 161.4 111 71.2
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 2.3e-37 159.5 131 64.1
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.0e-37 159.1 98 77.6
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.0e-37 159.1 98 76.5
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.0e-37 159.1 98 76.5
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.6e-36 156.0 162 54.9
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 5.7e-36 154.8 104 75.0
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 7.5e-36 154.5 131 64.1
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.3e-35 153.7 158 49.4
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 2.8e-35 152.5 100 71.0
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.8e-34 149.8 99 76.8
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 4.1e-34 148.7 146 51.4
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 5.3e-34 148.3 181 49.7
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 9.1e-34 147.5 156 48.1
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 2.9e-32 142.5 157 52.2
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 5.5e-31 138.3 156 50.6
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 2.1e-30 136.3 87 72.4
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 8.0e-30 134.4 126 59.5
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 1.2e-28 130.6 92 65.2
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 3.5e-17 92.4 73 65.8
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 5.0e-16 88.6 88 56.8
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 4.9e-11 72.0 68 57.4
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 5.4e-10 68.6 101 33.7
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 2.3e-08 63.2 119 33.6


User provided reference genes

Program Settings