Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 1.2e-103 380.2 250 100.0
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 7.6e-93 344.4 234 98.7
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 1.6e-90 336.7 234 97.4
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 1.3e-79 300.4 238 89.9
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 5.3e-78 295.0 250 86.8
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 1.6e-74 283.5 239 87.4
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 8.4e-68 261.2 238 81.1
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 6.7e-65 251.5 238 77.7
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 1.3e-63 247.3 239 75.3
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 2.1e-63 246.5 258 72.5
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 1.5e-61 240.4 262 59.9
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 4.5e-61 238.8 234 76.5
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 4.5e-61 238.8 209 84.2
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 4.5e-61 238.8 234 76.9
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 5.8e-61 238.4 213 83.6
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 2.9e-60 236.1 193 89.1
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 3.8e-60 235.7 238 77.3
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 3.8e-60 235.7 237 75.9
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 4.9e-60 235.3 240 74.6
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 6.5e-60 235.0 238 75.2
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 6.5e-60 235.0 240 75.4
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 1.1e-59 234.2 210 84.3
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 1.4e-59 233.8 155 74.8
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 1.4e-59 233.8 233 78.5
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 1.4e-59 233.8 238 75.2
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 1.9e-59 233.4 236 75.0
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 1.9e-59 233.4 234 76.5
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 3.2e-59 232.6 233 76.0
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 3.2e-59 232.6 239 75.7
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 4.2e-59 232.3 199 87.4
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 5.5e-59 231.9 238 76.5
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 5.5e-59 231.9 249 63.1
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 5.5e-59 231.9 234 77.4
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 5.5e-59 231.9 234 77.4
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 7.1e-59 231.5 238 76.1
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 9.3e-59 231.1 238 76.9
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 9.3e-59 231.1 254 71.7
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 1.2e-58 230.7 241 75.5
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 3.5e-58 229.2 234 76.9
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 7.9e-58 228.0 239 74.1
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 7.9e-58 228.0 244 76.6
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 1.0e-57 227.6 238 75.2
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 1.3e-57 227.3 238 73.5
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 1.8e-57 226.9 236 72.9
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 6.7e-57 224.9 234 74.8
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 8.7e-57 224.6 214 79.9
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 1.1e-56 224.2 238 73.5
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.1e-56 224.2 237 75.9
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.1e-56 224.2 199 85.9
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 1.9e-56 223.4 202 82.2
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.9e-56 223.4 200 85.0
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 3.3e-56 222.6 207 79.7
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 5.7e-56 221.9 230 77.0
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 5.7e-56 221.9 201 83.1
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 5.7e-56 221.9 233 75.5
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.1e-55 219.9 243 74.9
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 3.7e-55 219.2 249 70.3
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.8e-55 218.8 227 55.1
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 6.3e-55 218.4 157 70.1
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 6.3e-55 218.4 217 78.3
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 8.2e-55 218.0 234 73.5
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 8.2e-55 218.0 213 78.4
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 2.0e-53 213.4 219 76.3
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 5.9e-53 211.8 197 82.2
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 7.6e-53 211.5 200 67.0
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 1.0e-52 211.1 210 80.0
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 1.0e-52 211.1 213 76.5
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 1.3e-52 210.7 239 73.2
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 3.8e-52 209.1 242 72.7
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 3.8e-52 209.1 235 71.1
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 5.0e-52 208.8 238 71.4
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 6.5e-52 208.4 226 72.6
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 6.5e-52 208.4 235 70.2
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 8.5e-52 208.0 242 71.5
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 1.9e-51 206.8 242 69.8
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.2e-51 206.1 234 72.6
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 3.2e-51 206.1 239 71.1
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 9.3e-51 204.5 185 85.4
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 1.6e-50 203.8 234 70.1
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 2.1e-50 203.4 238 70.6
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 3.6e-50 202.6 237 70.9
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 3.6e-50 202.6 197 80.7
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 4.6e-50 202.2 244 70.5
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 4.6e-50 202.2 241 71.0
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 6.1e-50 201.8 211 77.3
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 7.9e-50 201.4 205 78.0
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 1.3e-49 200.7 238 60.1
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.1e-49 198.7 224 52.2
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 1.5e-48 197.2 198 77.3
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.5e-48 196.4 209 52.6
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.5e-48 196.4 209 52.6
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 1.6e-47 193.7 198 76.8
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 8.2e-47 191.4 146 67.8
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 1.1e-46 191.0 206 75.7
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 1.4e-46 190.7 208 75.0
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.4e-46 190.7 146 67.8
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.4e-46 190.7 146 67.8
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 1.8e-46 190.3 248 65.3
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 4.1e-46 189.1 240 67.5
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 4.1e-46 189.1 240 67.5
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 4.1e-46 189.1 240 67.5
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 6.9e-46 188.3 208 74.5
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 6.9e-46 188.3 146 67.1
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.2e-45 187.6 148 64.9
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 2.6e-45 186.4 205 74.6
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.6e-45 186.4 146 66.4
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 2.6e-45 186.4 240 66.7
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 3.4e-45 186.0 184 82.1
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 7.7e-45 184.9 240 67.1
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 1.7e-44 183.7 206 75.2
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.0e-44 182.2 144 63.2
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 8.5e-44 181.4 238 68.5
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 1.9e-43 180.3 123 69.1
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 1.0e-41 174.5 233 63.5
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 3.0e-41 172.9 165 86.7
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.0e-41 172.9 244 47.5
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 3.9e-41 172.6 217 69.1
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 3.9e-41 172.6 158 89.2
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 5.1e-41 172.2 184 78.3
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 6.7e-41 171.8 157 91.1
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 4.1e-38 162.5 240 64.6
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 9.1e-38 161.4 234 48.7
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 2.0e-37 160.2 139 61.2
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 9.4e-35 151.4 207 60.4
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 1.4e-33 147.5 156 81.4
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 8.8e-33 144.8 77 88.3
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 2.0e-32 143.7 106 67.9
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 2.0e-21 107.1 64 76.6
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 5.0e-12 75.9 110 81.8
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 3.2e-11 73.2 157 42.7
Cpa.g.sc3.109 Carica papaya HOM05D005832 ORTHO05D007117 3.6e-10 69.7 81 46.9


User provided reference genes

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