Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g081200.3 Solanum lycopersicum HOM05D001874 ORTHO05D025166 5.0e-32 140.6 75 100.0
Sopen03g021930 Solanum pennellii HOM05D001874 ORTHO05D025166 3.2e-31 137.9 75 97.3
Solyc03g097340.1 Solanum lycopersicum HOM05D001874 ORTHO05D002166 1.8e-13 79.0 49 79.6
Sopen03g028100 Solanum pennellii HOM05D001874 ORTHO05D002166 1.8e-13 79.0 49 79.6
PGSC0003DMG400000561 Solanum tuberosum HOM05D001874 ORTHO05D002166 1.8e-13 79.0 49 79.6
PGSC0003DMG400026477 Solanum tuberosum HOM05D001874 ORTHO05D002166 1.8e-13 79.0 49 79.6
Nitab4.5_0000319g0010 Nicotiana tabacum HOM05D001874 ORTHO05D002166 1.7e-11 72.4 49 69.4
Nitab4.5_0015003g0010 Nicotiana tabacum HOM05D001874 ORTHO05D002166 1.7e-11 72.4 49 69.4
PGSC0003DMG400044039 Solanum tuberosum HOM05D001874 ORTHO05D002166 7.0e-10 67.0 49 67.3
Solyc03g081210.1 Solanum lycopersicum HOM05D001874 ORTHO05D002166 7.7e-09 63.5 49 65.3
Sopen03g021940 Solanum pennellii HOM05D001874 ORTHO05D002166 7.7e-09 63.5 49 65.3
vmacro10162 Vaccinium macrocarpon HOM05D001874 ORTHO05D002166 1.0e-08 63.2 52 63.5
Hma1.2p1_0415F.1_g148210 Hydrangea macrophylla HOM05D001874 ORTHO05D002166 2.9e-08 61.6 47 66.0
MD01G1228700 Malus domestica HOM05D001874 ORTHO05D002166 2.9e-08 61.6 49 59.2
Dinv29208 Davidia involucrata HOM05D001874 ORTHO05D002166 3.8e-08 61.2 50 62.0
FvH4_7g32970 Fragaria vesca HOM05D001874 ORTHO05D002166 1.1e-07 59.7 49 59.2
FAN01G0715 Fragaria x ananassa HOM05D001874 ORTHO05D002166 1.1e-07 59.7 49 59.2
FAN03G2906 Fragaria x ananassa HOM05D001874 ORTHO05D002166 1.1e-07 59.7 49 59.2
FAN10G2792 Fragaria x ananassa HOM05D001874 ORTHO05D002166 1.1e-07 59.7 49 59.2
FAN10G3764 Fragaria x ananassa HOM05D001874 ORTHO05D002166 1.1e-07 59.7 49 59.2
DCAR_020377 Daucus carota HOM05D001874 ORTHO05D002166 1.9e-07 58.9 65 55.4
RcHm_v2.0_Chr1g0382931 Rosa chinensis HOM05D001874 ORTHO05D002166 1.9e-07 58.9 49 59.2
Actinidia08700 Actinidia chinensis HOM05D001874 ORTHO05D002166 2.5e-07 58.5 47 63.8
Peaxi162Scf00912g00146 Petunia axillaris HOM05D001874 ORTHO05D002166 2.5e-07 58.5 49 59.2
Prupe.2G319500 Prunus persica HOM05D001874 ORTHO05D002166 2.5e-07 58.5 49 55.1
Rhsim09G0209900 Rhododendron simsii HOM05D001874 ORTHO05D002166 2.5e-07 58.5 52 59.6
Dinv17297 Davidia involucrata HOM05D001874 ORTHO05D002166 4.2e-07 57.8 50 60.0
Actinidia34272 Actinidia chinensis HOM05D001874 ORTHO05D002166 5.5e-07 57.4 50 60.0
CSS0004406 Camellia sinensis var. sinensis HOM05D001874 ORTHO05D002166 5.5e-07 57.4 46 60.9
MD07G1299800 Malus domestica HOM05D001874 ORTHO05D002166 5.5e-07 57.4 49 57.1
Lj7P285T36 Lonicera japonica HOM05D001874 ORTHO05D002166 1.2e-06 56.2 47 59.6
Lsat_1_v5_gn_1_129320 Lactuca sativa HOM05D001874 ORTHO05D002166 3.6e-06 54.7 46 56.5
Oeu062807.1 Olea europaea HOM05D001874 ORTHO05D002166 8.0e-06 53.5 62 50.0


User provided reference genes

Program Settings