Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g033950.4 Solanum lycopersicum HOM05D004380 ORTHO05D005134 8.8e-224 780.4 536 100.0
PGSC0003DMG400022576 Solanum tuberosum HOM05D004380 ORTHO05D005134 8.9e-208 727.2 537 95.2
Sopen03g006700 Solanum pennellii HOM05D004380 ORTHO05D005134 2.3e-192 676.0 505 96.0
CAN.G1336.5 Capsicum annuum HOM05D004380 ORTHO05D005134 2.7e-172 609.4 546 80.6
Peaxi162Scf01164g00006 Petunia axillaris HOM05D004380 ORTHO05D005134 1.2e-151 540.8 567 73.4
Nitab4.5_0005084g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 1.5e-143 513.8 534 74.2
Nitab4.5_0008421g0010 Nicotiana tabacum HOM05D004380 ORTHO05D005134 3.7e-121 439.5 540 66.7
Migut.J01084 Erythranthe guttata HOM05D004380 ORTHO05D005134 3.1e-120 436.4 568 48.2
GSVIVG01013206001 Vitis vinifera HOM05D004380 ORTHO05D005134 2.9e-118 429.9 539 53.6
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 5.0e-118 429.1 547 50.5
Potri.003G087200 Populus trichocarpa HOM05D004380 ORTHO05D005134 8.0e-116 421.8 543 59.1
vmacro14143 Vaccinium macrocarpon HOM05D004380 ORTHO05D005134 1.0e-115 421.4 535 54.4
Cc01_g02120 Coffea canephora HOM05D004380 ORTHO05D005134 3.0e-115 419.9 551 62.4
CiPaw.11G087400 Carya illinoinensis HOM05D004380 ORTHO05D005134 8.8e-115 418.3 571 46.1
Rhsim07G0121900 Rhododendron simsii HOM05D004380 ORTHO05D005134 1.2e-114 417.9 540 56.1
Actinidia10879 Actinidia chinensis HOM05D004380 ORTHO05D005134 3.4e-114 416.4 539 61.6
Cfa012380 Carpinus fangiana HOM05D004380 ORTHO05D005134 8.3e-113 411.8 535 51.6
SGA_v2.0_scaffold86G26890 Striga asiatica HOM05D004380 ORTHO05D005134 1.4e-112 411.0 540 50.0
Dinv25182 Davidia involucrata HOM05D004380 ORTHO05D005134 1.5e-109 401.0 522 53.4
Manes.15G172200 Manihot esculenta HOM05D004380 ORTHO05D005134 3.6e-108 396.4 585 49.6
Sed0018208 Sechium edule HOM05D004380 ORTHO05D005134 2.3e-107 393.7 583 42.9
ClCG03G011240 Citrullus lanatus HOM05D004380 ORTHO05D005134 4.0e-107 392.9 556 45.1
QL03p017813 Quercus lobata HOM05D004380 ORTHO05D005134 4.0e-107 392.9 541 50.3
TWI81G0890 Tripterygium wilfordii HOM05D004380 ORTHO05D005134 3.4e-106 389.8 573 44.7
DCAR_015696 Daucus carota HOM05D004380 ORTHO05D005134 1.1e-104 384.8 567 46.9
Atru.chr1.3775 Acer truncatum HOM05D004380 ORTHO05D005134 1.4e-104 384.4 526 54.9
Ah.09g224390 Amaranthus hybridus HOM05D004380 ORTHO05D005134 2.4e-104 383.6 535 57.4
Lsat_1_v5_gn_6_63641 Lactuca sativa HOM05D004380 ORTHO05D005134 2.4e-104 383.6 536 47.6
CAN.G1823.5 Capsicum annuum HOM05D004380 ORTHO05D005134 9.2e-104 381.7 245 82.9
CsaV3_2G035720 Cucumis sativus L. HOM05D004380 ORTHO05D005134 9.2e-104 381.7 580 43.4
THA.LOC104814403 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 1.6e-103 380.9 561 49.6
Haze_08305 Corylus avellana HOM05D004380 ORTHO05D005134 2.0e-103 380.6 590 53.9
Cpa.g.sc69.34 Carica papaya HOM05D004380 ORTHO05D005134 2.7e-103 380.2 548 44.9
Hma1.2p1_0311F.1_g121260 Hydrangea macrophylla HOM05D004380 ORTHO05D005134 2.3e-102 377.1 524 53.6
Thecc.05G299600 Theobroma cacao HOM05D004380 ORTHO05D005134 6.6e-102 375.6 533 56.7
Lalb_Chr04g0258181 Lupinus albus HOM05D004380 ORTHO05D005134 7.3e-101 372.1 535 49.5
Nn6g33684 Nelumbo nucifera HOM05D004380 ORTHO05D005134 1.6e-100 370.9 623 57.5
ECA233G1538 Erigeron canadensis HOM05D004380 ORTHO05D005134 3.6e-100 369.8 538 54.3
Medtr8g030840 Medicago truncatula HOM05D004380 ORTHO05D005134 3.6e-100 369.8 530 50.0
Sabra03G0056900 Salix brachista HOM05D004380 ORTHO05D005134 3.6e-100 369.8 557 53.9
Oeu045705.2 Olea europaea HOM05D004380 ORTHO05D005134 2.3e-99 367.1 550 46.7
Gorai.007G293700 Gossypium raimondii HOM05D004380 ORTHO05D005134 3.0e-99 366.7 558 56.6
arahy.Tifrunner.gnm1.ann1.522STQ Arachis hypogaea HOM05D004380 ORTHO05D005134 8.9e-99 365.2 574 42.2
Gohir.A11G262400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 2.9e-97 360.1 558 55.9
Duzib128G0331 Durio zibethinus HOM05D004380 ORTHO05D005134 6.4e-97 359.0 534 50.4
Thhalv10007193m.g Eutrema salsugineum HOM05D004380 ORTHO05D005134 3.2e-96 356.7 540 58.0
HanXRQChr16g0500491 Helianthus annuus HOM05D004380 ORTHO05D005134 3.2e-96 356.7 543 47.9
BcaB03g13784 Brassica carinata HOM05D004380 ORTHO05D005134 4.1e-96 356.3 547 60.0
MD16G1006500 Malus domestica HOM05D004380 ORTHO05D005134 4.1e-96 356.3 531 55.0
CANSAT21G1629 Cannabis sativa HOM05D004380 ORTHO05D005134 5.4e-96 355.9 538 52.6
Prupe.8G202500 Prunus persica HOM05D004380 ORTHO05D005134 1.2e-95 354.8 540 44.3
Aa31LG9G15640 Aethionema arabicum HOM05D004380 ORTHO05D005134 3.5e-95 353.2 552 46.6
Carub.0001s3020 Capsella rubella HOM05D004380 ORTHO05D005134 1.0e-94 351.7 561 55.3
Lj6C290G5 Lonicera japonica HOM05D004380 ORTHO05D005134 1.3e-94 351.3 608 45.1
Gohir.D11G272400 Gossypium hirsutum HOM05D004380 ORTHO05D005134 2.3e-94 350.5 559 55.1
AT1G31870 Arabidopsis thaliana HOM05D004380 ORTHO05D005134 6.6e-94 349.0 543 51.9
HanXRQChr12g0372541 Helianthus annuus HOM05D004380 ORTHO05D005134 2.5e-93 347.1 542 51.1
Lj3g0000626 Lotus japonicus HOM05D004380 ORTHO05D005134 2.5e-93 347.1 535 50.5
PSO782G4920 Papaver somniferum HOM05D004380 ORTHO05D005134 3.3e-93 346.7 538 59.3
AL1G45970 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 4.3e-93 346.3 537 57.2
Ciclev10033653m.g Citrus clementina HOM05D004380 ORTHO05D005134 7.3e-93 345.5 549 53.9
EL10Ac4g09041 Beta vulgaris HOM05D004380 ORTHO05D005134 9.5e-93 345.1 512 59.8
CARHR031210 Cardamine hirsuta HOM05D004380 ORTHO05D005134 1.2e-92 344.7 540 56.5
BolC5t32694H Brassica oleracea HOM05D004380 ORTHO05D005134 1.6e-92 344.4 541 56.2
C05p39530 Brassica napus HOM05D004380 ORTHO05D005134 2.8e-92 343.6 544 58.1
BcaC05g27949 Brassica carinata HOM05D004380 ORTHO05D005134 8.0e-92 342.0 544 58.1
RcHm_v2.0_Chr4g0446311 Rosa chinensis HOM05D004380 ORTHO05D005134 8.0e-92 342.0 535 56.1
Glyma.07G070900 Glycine max HOM05D004380 ORTHO05D005134 2.3e-91 340.5 550 46.9
TAR629G2821 Trochodendron aralioides HOM05D004380 ORTHO05D005134 6.8e-91 339.0 542 44.5
A05p25450 Brassica napus HOM05D004380 ORTHO05D005134 7.5e-90 335.5 540 57.0
BraA05t21429Z Brassica rapa HOM05D004380 ORTHO05D005134 7.5e-90 335.5 550 56.5
PSO832G0693 Papaver somniferum HOM05D004380 ORTHO05D005134 1.3e-89 334.7 542 57.2
PSO063G6462 Papaver somniferum HOM05D004380 ORTHO05D005134 3.7e-89 333.2 542 56.8
unitig_21.g20505 Utricularia gibba HOM05D004380 ORTHO05D005134 3.7e-89 333.2 560 45.4
CDE02G1296 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 1.9e-88 330.9 557 46.0
FAN22G0510 Fragaria x ananassa HOM05D004380 ORTHO05D005134 9.2e-88 328.6 538 51.7
VMungo0331G0855 Vigna mungo HOM05D004380 ORTHO05D005134 1.6e-87 327.8 546 46.3
FAN17G2609 Fragaria x ananassa HOM05D004380 ORTHO05D005134 4.6e-87 326.2 539 56.2
Phvul.010G098800 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 7.8e-87 325.5 561 44.9
Sp1g27590 Schrenkiella parvula HOM05D004380 ORTHO05D005134 1.0e-86 325.1 496 60.5
COL.COLO4_13527 Corchorus olitorius HOM05D004380 ORTHO05D005134 3.0e-86 323.6 221 71.5
Psat4g154840 Pisum sativum HOM05D004380 ORTHO05D005134 1.5e-85 321.2 536 45.0
FAN07G2732 Fragaria x ananassa HOM05D004380 ORTHO05D005134 4.7e-84 316.2 538 53.3
AUR62007222 Chenopodium quinoa HOM05D004380 ORTHO05D005134 8.1e-84 315.5 567 51.0
Aqoxy3G00393 Aquilegia oxysepala HOM05D004380 ORTHO05D005134 4.0e-83 313.2 535 55.7
FvH4_4g36560 Fragaria vesca HOM05D004380 ORTHO05D005134 1.2e-82 311.6 536 47.4
FAN12G0331 Fragaria x ananassa HOM05D004380 ORTHO05D005134 1.2e-82 311.6 536 47.4
Os08g0178300 Oryza sativa ssp. japonica HOM05D004380 ORTHO05D005134 2.2e-81 307.4 545 54.9
AUR62018778 Chenopodium quinoa HOM05D004380 ORTHO05D005134 1.1e-80 305.1 517 54.7
CiPaw.04G096200 Carya illinoinensis HOM05D004380 ORTHO05D005134 7.1e-80 302.4 570 38.6
CAN.G248.21 Capsicum annuum HOM05D004380 ORTHO05D005134 2.7e-79 300.4 230 67.0
arahy.Tifrunner.gnm1.ann1.MX4EXC Arachis hypogaea HOM05D004380 ORTHO05D005134 2.5e-77 293.9 536 39.6
CDE11G0710 Ceratophyllum demersum HOM05D004380 ORTHO05D005134 5.6e-77 292.7 533 44.5
Actinidia31472 Actinidia chinensis HOM05D004380 ORTHO05D005134 2.1e-76 290.8 291 56.4
ATR0665G406 Amborella trichopoda HOM05D004380 ORTHO05D005134 3.8e-73 280.0 598 49.5
arahy.Tifrunner.gnm1.ann1.ARJY2C Arachis hypogaea HOM05D004380 ORTHO05D005134 3.6e-68 263.5 267 57.3
Phvul.011G076400 Phaseolus vulgaris HOM05D004380 ORTHO05D005134 5.2e-67 259.6 190 66.8
AagrBONN_evm.TU.Sc2ySwM_117.3835 Anthoceros agrestis HOM05D004380 ORTHO05D005134 5.8e-66 256.1 270 53.7
Mapoly0062s0011 Marchantia polymorpha HOM05D004380 ORTHO05D005134 1.3e-65 255.0 547 50.5
Haze_08308 Corylus avellana HOM05D004380 ORTHO05D005134 1.4e-64 251.5 506 52.6
TPR.G23111 Trifolium pratense HOM05D004380 ORTHO05D005134 4.6e-63 246.5 148 75.7
HPP92_020120 Vanilla planifolia HOM05D004380 ORTHO05D005134 4.6e-63 246.5 170 72.9
Pp3c3_10050 Physcomitrium patens HOM05D004380 ORTHO05D005134 1.7e-62 244.6 249 56.6
Hund11501 Selenicereus undatus HOM05D004380 ORTHO05D005134 2.3e-62 244.2 149 78.5
THA.LOC104812727 Tarenaya hassleriana HOM05D004380 ORTHO05D005134 2.3e-62 244.2 257 52.1
HPP92_020130 Vanilla planifolia HOM05D004380 ORTHO05D005134 2.3e-62 244.2 168 73.2
Cpa.g.sc69.32 Carica papaya HOM05D004380 ORTHO05D005134 3.0e-62 243.8 148 79.7
Aa31LG9G6660 Aethionema arabicum HOM05D004380 ORTHO05D005134 1.9e-61 241.1 149 77.2
Sed0024296 Sechium edule HOM05D004380 ORTHO05D005134 1.1e-59 235.3 206 61.2
SMO144G0180 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 1.4e-59 235.0 217 54.8
arahy.Tifrunner.gnm1.ann1.I1PL9V Arachis hypogaea HOM05D004380 ORTHO05D005134 6.9e-59 232.6 160 70.0
CARHR062710 Cardamine hirsuta HOM05D004380 ORTHO05D005134 9.0e-59 232.3 179 65.9
MELO3C024775.2 Cucumis melo HOM05D004380 ORTHO05D005134 4.9e-57 226.5 485 37.1
SEGI_39298 Sequoiadendron giganteum HOM05D004380 ORTHO05D005134 8.4e-57 225.7 554 44.6
SMO118G0163 Selaginella moellendorffii HOM05D004380 ORTHO05D005134 1.8e-54 218.0 227 52.0
DCAR_007574 Daucus carota HOM05D004380 ORTHO05D005134 3.0e-54 217.2 149 69.1
CBR_g26347 Chara braunii HOM05D004380 ORTHO05D005134 1.9e-53 214.5 295 43.7
arahy.Tifrunner.gnm1.ann1.MH0ZUI Arachis hypogaea HOM05D004380 ORTHO05D005134 5.3e-51 206.5 160 63.8
Sc22g0001370 Simmondsia chinensis HOM05D004380 ORTHO05D005134 4.5e-50 203.4 464 57.3
TPR.G20578 Trifolium pratense HOM05D004380 ORTHO05D005134 6.4e-49 199.5 113 77.9
arahy.Tifrunner.gnm1.ann1.45D7QY Arachis hypogaea HOM05D004380 ORTHO05D005134 1.1e-48 198.7 160 63.8
Oeu037610.2 Olea europaea HOM05D004380 ORTHO05D005134 5.1e-46 189.9 412 44.2
CAN.G1186.1 Capsicum annuum HOM05D004380 ORTHO05D005134 8.4e-41 172.6 130 78.5
Cre01.g003487 Chlamydomonas reinhardtii HOM05D004380 ORTHO05D005134 1.5e-37 161.8 195 46.7
MCO15G532 Micromonas commoda HOM05D004380 ORTHO05D005134 4.8e-36 156.8 257 37.0
CSS0001415 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 2.4e-35 154.5 86 80.2
CSS0037993 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 2.4e-35 154.5 86 80.2
CSS0014122 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 1.1e-32 145.6 351 48.1
CSS0026269 Camellia sinensis var. sinensis HOM05D004380 ORTHO05D005134 1.1e-32 145.6 351 48.1
Ca_23634_v3 Cicer arietinum L. HOM05D000346 ORTHO05D000326 3.9e-30 137.1 361 40.2
Potri.001G147100 Populus trichocarpa HOM05D004380 ORTHO05D005134 3.7e-28 130.6 512 28.9
PRCOL_00005638 Prasinoderma coloniale HOM05D004380 ORTHO05D005134 9.1e-27 125.9 216 38.4
Sp5g21510 Schrenkiella parvula HOM05D004380 ORTHO05D005134 5.0e-25 120.2 98 60.2
Haze_13061 Corylus avellana HOM05D000001 ORTHO05D010365 1.1e-24 119.0 105 58.1
Lsat_1_v5_gn_3_2421 Lactuca sativa HOM05D004380 ORTHO05D005134 1.1e-24 119.0 98 63.3
Hund11272 Selenicereus undatus HOM05D004380 ORTHO05D005134 7.9e-23 112.8 98 61.2
QL12p007207 Quercus lobata HOM05D004380 ORTHO05D005134 1.1e-19 102.4 116 50.9
Dinv40656 Davidia involucrata HOM05D000301 ORTHO05D000303 5.3e-19 100.1 65 67.7
SHI10270 Sapria himalayana HOM05D004380 ORTHO05D005134 3.8e-17 94.0 93 58.1
Zm00001eb400590 Zea mays HOM05D004380 ORTHO05D005134 6.5e-17 93.2 101 52.5
TPR.G11131 Trifolium pratense HOM05D004380 ORTHO05D005134 1.6e-15 88.6 132 45.5
HPP92_020129 Vanilla planifolia HOM05D004380 ORTHO05D005134 3.6e-15 87.4 78 56.4
Cfa026589 Carpinus fangiana HOM05D004380 ORTHO05D005134 4.7e-15 87.0 138 37.7
COL.COLO4_33038 Corchorus olitorius HOM05D004380 ORTHO05D005134 4.7e-15 87.0 89 56.2
AL3G52660 Arabidopsis lyrata HOM05D004380 ORTHO05D005134 1.0e-14 85.9 66 59.1
Lj2C247T7 Lonicera japonica HOM05D004380 ORTHO05D005134 3.0e-14 84.3 78 60.3
TPR.G22617 Trifolium pratense HOM05D004380 ORTHO05D005134 5.2e-14 83.6 76 56.6
TPR.G17657 Trifolium pratense HOM05D004380 ORTHO05D005134 4.8e-12 77.0 112 46.4
C05p31200 Brassica napus HOM05D004380 ORTHO05D005134 1.1e-11 75.9 64 57.8
Medtr8g446970 Medicago truncatula HOM05D004380 ORTHO05D005134 8.0e-07 59.7 60 50.0
Cpa.g.c30383 Carica papaya HOM05D004380 ORTHO05D005134 1.4e-06 58.9 59 59.3
Solyc11g066530.3 Solanum lycopersicum HOM05D004380 ORTHO05D005134 1.8e-06 58.5 28 100.0
Medtr4g081620 Medicago truncatula HOM05D004380 ORTHO05D005134 4.0e-06 57.4 87 46.0
vmacro21374 Vaccinium macrocarpon HOM05D000230 ORTHO05D011064 8.8e-06 56.2 63 49.2


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