Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g013510.1 Solanum lycopersicum HOM05D000155 ORTHO05D000022 1.4e-43 179.1 84 100.0
Sopen00g002660 Solanum pennellii HOM05D000155 ORTHO05D000022 1.4e-30 136.0 83 79.5
Sopen10g026630 Solanum pennellii HOM05D000155 ORTHO05D000022 1.4e-30 136.0 83 79.5
Nitab4.5_0009334g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-25 119.0 77 75.3
Nitab4.5_0000455g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.4e-21 104.4 81 58.0
Nitab4.5_0000008g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-19 99.4 77 58.4
Peaxi162Scf00037g01330 Petunia axillaris HOM05D000155 ORTHO05D000022 1.2e-18 96.3 81 55.6
Peaxi162Scf00983g00034 Petunia axillaris HOM05D000155 ORTHO05D000022 6.0e-18 94.0 83 57.8
Nitab4.5_0007924g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.8e-18 93.6 77 57.1
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 1.9e-16 89.0 81 49.4
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 1.9e-16 89.0 81 49.4
Peaxi162Scf00209g00055 Petunia axillaris HOM05D009863 ORTHO05D000022 7.3e-16 87.0 73 58.9
PGSC0003DMG400037811 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.3e-16 87.0 77 53.2
Nitab4.5_0000106g0410 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-15 86.3 75 54.7
Nitab4.5_0006200g0010 Nicotiana tabacum HOM05D009863 ORTHO05D000022 2.1e-15 85.5 65 63.1
Nitab4.5_0000163g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.7e-15 84.3 77 51.9
Nitab4.5_0000249g0290 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-14 82.8 69 53.6
Peaxi162Scf00362g00102 Petunia axillaris HOM05D009863 ORTHO05D000022 1.4e-14 82.8 74 51.4
Peaxi162Scf00776g00232 Petunia axillaris HOM05D000155 ORTHO05D000022 1.4e-14 82.8 74 51.4
PGSC0003DMG400023541 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.4e-14 82.8 74 56.8
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 2.4e-14 82.0 73 54.8
PGSC0003DMG400020870 Solanum tuberosum HOM05D000155 ORTHO05D000022 5.2e-14 80.9 77 44.2
Nitab4.5_0011459g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.9e-14 80.1 81 50.6
Peaxi162Scf00336g01716 Petunia axillaris HOM05D000155 ORTHO05D000022 1.5e-13 79.3 74 50.0
Peaxi162Scf01149g10016 Petunia axillaris HOM05D000155 ORTHO05D000022 2.6e-13 78.6 77 51.9
PGSC0003DMG400024870 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.4e-13 78.2 74 51.4
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 7.6e-13 77.0 77 48.1
Solyc11g030810.1 Solanum lycopersicum HOM05D065117 ORTHO05D049425 1.3e-12 76.3 48 72.9
Nitab4.5_0000650g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-12 75.9 77 48.1
Nitab4.5_0001443g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.9e-12 75.1 66 54.5
Nitab4.5_0000190g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.4e-12 73.9 77 44.2
Nitab4.5_0000419g0150 Nicotiana tabacum HOM05D014153 ORTHO05D016355 6.4e-12 73.9 63 57.1
Peaxi162Scf00223g00111 Petunia axillaris HOM05D000155 ORTHO05D000022 6.4e-12 73.9 66 51.5
Nitab4.5_0001440g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.4e-12 73.6 65 55.4
PGSC0003DMG400000971 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.4e-11 72.8 68 48.5
Nitab4.5_0000249g0120 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.4e-11 70.9 76 47.4
CAN.G199.49 Capsicum annuum HOM05D000155 ORTHO05D000022 7.1e-11 70.5 73 49.3
Nitab4.5_0008416g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.2e-11 70.1 78 44.9
Peaxi162Scf00229g00123 Petunia axillaris HOM05D000155 ORTHO05D000022 9.2e-11 70.1 68 51.5
Nitab4.5_0000280g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-10 69.3 77 48.1
Nitab4.5_0000053g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.1e-10 68.9 77 45.5
CAN.G447.3 Capsicum annuum HOM05D000155 ORTHO05D000022 2.7e-10 68.6 74 41.9
PGSC0003DMG400040069 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.6e-10 67.8 81 44.4
Peaxi162Scf00763g00036 Petunia axillaris HOM05D009863 ORTHO05D000022 6.0e-10 67.4 55 65.5
Nitab4.5_0000477g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.8e-10 67.0 64 50.0
Nitab4.5_0004341g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-09 65.9 77 44.2
Nitab4.5_0001807g0040 Nicotiana tabacum HOM05D009863 ORTHO05D000022 3.0e-09 65.1 60 48.3
CAN.G953.14 Capsicum annuum HOM05D000155 ORTHO05D000022 5.1e-09 64.3 68 48.5
Peaxi162Scf00140g00027 Petunia axillaris HOM05D000155 ORTHO05D049348 6.6e-09 63.9 52 61.5
Sopen04g008670 Solanum pennellii HOM05D000155 ORTHO05D000022 8.7e-09 63.5 73 43.8
Nitab4.5_0000551g0190 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-08 63.2 54 59.3
Nitab4.5_0004929g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.1e-08 63.2 54 55.6
Peaxi162Scf00182g01115 Petunia axillaris HOM05D052467 ORTHO05D050240 1.9e-08 62.4 50 58.0
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.9e-08 62.4 74 43.2
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 2.5e-08 62.0 81 40.7
PGSC0003DMG400037922 Solanum tuberosum HOM05D000155 ORTHO05D000022 2.5e-08 62.0 80 45.0
CAN.G1249.3 Capsicum annuum HOM05D009916 ORTHO05D014164 3.3e-08 61.6 47 57.4
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 3.3e-08 61.6 81 39.5
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-08 61.6 81 39.5
Sopen02g008700 Solanum pennellii HOM05D000003 ORTHO05D000022 3.3e-08 61.6 79 40.5
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 5.6e-08 60.8 81 39.5
Nitab4.5_0002637g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.3e-08 60.5 80 45.0
Peaxi162Scf00109g00093 Petunia axillaris HOM05D000155 ORTHO05D000022 7.3e-08 60.5 68 44.1
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 7.3e-08 60.5 81 38.3
PGSC0003DMG400039694 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.3e-08 60.5 81 38.3
Peaxi162Scf00252g00032 Petunia axillaris HOM05D000155 ORTHO05D000022 9.6e-08 60.1 77 44.2
Sopen10g022660 Solanum pennellii HOM05D000155 ORTHO05D000022 9.6e-08 60.1 70 44.3
CiPaw.03G110900 Carya illinoinensis HOM05D000155 ORTHO05D000022 1.2e-07 59.7 78 42.3
Nitab4.5_0000009g0450 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-07 59.7 74 40.5
Sopen08g015460 Solanum pennellii HOM05D000155 ORTHO05D000022 1.2e-07 59.7 79 39.2
PGSC0003DMG400034828 Solanum tuberosum HOM05D000155 ORTHO05D000022 1.2e-07 59.7 81 37.0
Peaxi162Scf00822g00214 Petunia axillaris HOM05D009863 ORTHO05D000022 1.6e-07 59.3 52 50.0
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.6e-07 59.3 79 40.5
Sopen05g017850 Solanum pennellii HOM05D000155 ORTHO05D000022 1.6e-07 59.3 79 39.2
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-07 59.3 81 37.0
Sopen11g007870 Solanum pennellii HOM05D000155 ORTHO05D000007 2.1e-07 58.9 81 38.3
Nitab4.5_0000732g0150 Nicotiana tabacum HOM05D009916 ORTHO05D000022 2.8e-07 58.5 46 56.5
Nitab4.5_0010557g0030 Nicotiana tabacum HOM05D009916 ORTHO05D000022 2.8e-07 58.5 73 49.3
Sopen05g017800 Solanum pennellii HOM05D000155 ORTHO05D000022 2.8e-07 58.5 79 39.2
Solyc02g050170.1 Solanum lycopersicum HOM05D009863 ORTHO05D000022 4.7e-07 57.8 59 47.5
Sopen11g013390 Solanum pennellii HOM05D000024 ORTHO05D000007 4.7e-07 57.8 77 37.7
PGSC0003DMG400035792 Solanum tuberosum HOM05D000155 ORTHO05D000022 6.2e-07 57.4 78 39.7
Sopen05g012800 Solanum pennellii HOM05D000024 ORTHO05D000007 1.1e-06 56.6 80 38.8
Sopen06g016720 Solanum pennellii HOM05D000024 ORTHO05D017131 1.1e-06 56.6 73 41.1
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 1.1e-06 56.6 79 39.2
MBI15_g35008_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.4e-06 56.2 73 39.7
MBI16_g08493_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.4e-06 56.2 82 41.5
Nitab4.5_0004235g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-06 56.2 56 48.2
Sopen03g008140 Solanum pennellii HOM05D000014 ORTHO05D000016 1.4e-06 56.2 79 39.2
Sopen04g016850 Solanum pennellii HOM05D000024 ORTHO05D000006 1.4e-06 56.2 79 38.0
Sopen05g018040 Solanum pennellii HOM05D000155 ORTHO05D000022 1.4e-06 56.2 79 38.0
Nitab4.5_0000006g0350 Nicotiana tabacum HOM05D009863 ORTHO05D000022 1.8e-06 55.8 67 44.8
Peaxi162Scf01058g00012 Petunia axillaris HOM05D000155 ORTHO05D000022 1.8e-06 55.8 76 47.4
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 1.8e-06 55.8 81 39.5
Sopen06g012050 Solanum pennellii HOM05D000155 ORTHO05D000022 1.8e-06 55.8 78 38.5
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.8e-06 55.8 69 40.6
MBI05_g32513_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.4e-06 55.5 68 42.6
PGSC0003DMG400037470 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.4e-06 55.5 71 36.6
Nitab4.5_0002592g0060 Nicotiana tabacum HOM05D009863 ORTHO05D000022 3.1e-06 55.1 54 46.3
Peaxi162Scf00078g00215 Petunia axillaris HOM05D000155 ORTHO05D000022 3.1e-06 55.1 78 37.2
Sopen05g012770 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-06 55.1 81 34.6
Sopen10g010480 Solanum pennellii HOM05D000155 ORTHO05D000022 3.1e-06 55.1 81 32.1
MBI14_g27960_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 75 37.3
Peaxi162Scf00109g00107 Petunia axillaris HOM05D000155 ORTHO05D000022 4.0e-06 54.7 62 43.5
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-06 54.7 74 39.2
Sopen08g015470 Solanum pennellii HOM05D000155 ORTHO05D000022 4.0e-06 54.7 79 38.0
Sopen09g017040 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-06 54.7 74 40.5
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 4.0e-06 54.7 74 39.2
PGSC0003DMG400037358 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.0e-06 54.7 74 37.8
Sopen01g024750 Solanum pennellii HOM05D000155 ORTHO05D000022 5.2e-06 54.3 74 37.8
Peaxi162Scf00537g00047 Petunia axillaris HOM05D000155 ORTHO05D000022 6.9e-06 53.9 57 52.6
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 6.9e-06 53.9 75 40.0
Sopen03g010900 Solanum pennellii HOM05D000155 ORTHO05D000022 6.9e-06 53.9 81 35.8
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 6.9e-06 53.9 79 38.0
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 6.9e-06 53.9 81 35.8
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 6.9e-06 53.9 78 37.2
Nitab4.5_0000731g0100 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.0e-06 53.5 64 46.9
Nitab4.5_0007438g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.0e-06 53.5 54 50.0
Sopen03g011810 Solanum pennellii HOM05D000004 ORTHO05D000034 9.0e-06 53.5 78 38.5
PGSC0003DMG400045895 Solanum tuberosum HOM05D000155 ORTHO05D000022 9.0e-06 53.5 73 38.4


User provided reference genes

Program Settings