Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 0.0e+00 1495.3 1056 100.0
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 0.0e+00 1479.2 1056 98.2
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 0.0e+00 1355.5 1056 91.3
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 0.0e+00 1224.5 1056 86.1
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 0.0e+00 1084.3 979 79.8
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 3.0e-300 1035.4 1069 73.9
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 6.7e-300 1034.2 1067 74.2
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 1.8e-289 999.6 1060 74.0
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 2.5e-286 989.2 1105 73.0
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 9.4e-286 987.3 1121 70.7
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 1.2e-285 986.9 1064 73.8
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 2.1e-285 986.1 1059 62.4
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 2.3e-284 982.6 1058 74.7
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.8e-284 980.7 1060 73.1
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.8e-284 980.7 1060 73.1
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.5e-283 979.9 1079 73.2
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.5e-283 979.9 1108 71.1
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 9.7e-283 977.2 1065 72.7
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 8.2e-282 974.2 1107 70.7
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 2.4e-281 972.6 1119 70.1
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 5.3e-281 971.5 1053 72.2
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 1.2e-280 970.3 1114 71.6
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 2.0e-280 969.5 1051 72.8
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 2.2e-279 966.1 1089 71.4
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 6.5e-279 964.5 1061 72.8
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 1.1e-278 963.8 1053 71.6
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 9.4e-278 960.7 1064 70.0
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 2.7e-277 959.1 1102 70.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 3.6e-277 958.7 1073 72.5
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 1.0e-276 957.2 1063 70.6
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 5.2e-276 954.9 1059 71.3
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 5.2e-276 954.9 1059 71.1
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 6.7e-276 954.5 1053 72.1
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.7e-276 954.5 1050 71.8
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 8.8e-276 954.1 1132 70.9
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.5e-275 953.4 1111 70.0
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 2.6e-275 952.6 1059 72.4
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 4.4e-275 951.8 1076 71.4
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 4.4e-275 951.8 1123 69.7
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 7.5e-275 951.0 1058 74.4
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 7.5e-275 951.0 1111 69.8
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.7e-274 949.9 1111 69.8
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.2e-274 949.5 1061 71.8
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 4.8e-274 948.3 491 95.5
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 6.3e-274 948.0 1060 71.7
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 1.1e-273 947.2 1078 69.5
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.7e-272 942.6 1120 68.8
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 2.2e-271 939.5 1063 70.3
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 3.2e-270 935.6 1084 68.2
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 1.2e-267 927.2 1079 67.5
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.3e-266 923.7 1083 71.7
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 1.3e-266 923.7 1064 70.0
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 2.2e-266 922.9 1058 70.4
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 2.2e-266 922.9 1057 72.8
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 4.8e-266 921.8 1058 71.9
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 2.4e-265 919.5 1056 69.5
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 4.1e-265 918.7 1057 72.6
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 7.0e-265 917.9 1055 71.7
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 4.5e-264 915.2 1072 67.3
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 5.9e-264 914.8 1066 67.5
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 7.7e-264 914.4 1056 71.1
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 1.3e-263 913.7 1052 69.6
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.1e-262 910.6 1112 68.4
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 4.2e-262 908.7 1051 71.6
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 4.2e-262 908.7 1088 69.8
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.2e-262 907.9 1088 69.7
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 2.7e-261 906.0 1147 47.0
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 6.1e-261 904.8 1059 67.0
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 6.1e-261 904.8 1059 67.0
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 4.9e-258 895.2 1084 66.6
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 2.4e-257 892.9 1060 69.0
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 1.2e-256 890.6 1071 68.9
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 3.5e-256 889.0 1060 67.0
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 3.5e-256 889.0 1067 63.4
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.7e-255 886.7 1057 69.0
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-254 884.0 1066 71.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 5.6e-254 881.7 1115 66.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.6e-253 880.2 1076 68.8
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 1.8e-252 876.7 1061 66.7
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 5.2e-252 875.2 1054 69.7
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 2.3e-247 859.8 1237 43.5
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 9.5e-246 854.4 1065 65.4
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 2.3e-244 849.7 1017 67.1
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.2e-243 847.4 1070 66.6
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 6.4e-242 841.6 1058 66.8
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.6e-240 837.0 1055 68.2
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.5e-240 835.9 1061 67.6
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 1.0e-239 834.3 1070 61.0
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.5e-238 830.5 1055 67.6
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 2.3e-231 806.6 923 75.2
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 8.1e-229 798.1 485 79.4
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 6.0e-224 781.9 1060 65.9
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 7.8e-224 781.6 911 72.7
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 4.3e-222 775.8 492 76.6
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.4e-218 761.9 493 75.3
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.3e-212 742.3 799 65.7
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 2.2e-210 736.9 1048 59.2
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.3e-207 727.6 1055 55.1
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 3.1e-204 716.5 489 73.0
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.5e-203 714.1 1052 61.3
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 1.3e-181 641.3 916 65.7
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 3.6e-176 623.2 484 64.0
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.3e-173 614.8 986 57.4
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.9e-153 547.7 854 67.0
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 6.5e-146 522.7 340 81.5
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 8.0e-144 515.8 446 60.5
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.8e-135 488.0 1043 44.7
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 3.7e-133 480.3 819 66.7
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 8.6e-130 469.2 1044 46.7
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.3e-109 402.1 253 75.1
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 3.9e-98 364.0 537 39.9
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 1.5e-97 362.1 504 44.6
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 6.0e-91 340.1 698 59.5
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 6.7e-90 336.7 205 78.5
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 8.4e-85 319.7 202 75.2
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 1.3e-80 305.8 352 50.6
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.1e-71 276.2 462 37.2
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 8.5e-69 266.5 503 36.8
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.3e-64 252.7 171 71.3
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 8.5e-61 240.0 338 51.8
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 1.2e-59 236.1 265 50.2
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.5e-57 229.2 310 54.2
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 2.1e-51 208.8 130 76.2
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 1.7e-45 189.1 133 64.7
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 1.3e-40 172.9 99 79.8
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.8e-39 169.1 130 66.9
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 3.1e-39 168.3 130 66.9
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.5e-37 160.6 93 86.0
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.6e-35 154.8 112 70.5
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 4.7e-35 154.5 181 48.6
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 1.4e-34 152.9 148 60.1
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 3.4e-33 148.3 93 76.3
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-30 139.8 93 73.1
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.9e-28 132.5 74 77.0
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 9.8e-25 120.2 105 64.8
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.3e-24 119.8 81 71.6
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 2.7e-22 112.1 142 45.1
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.9e-20 105.9 191 36.1
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 5.0e-13 81.3 120 39.2
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 2.9e-08 65.5 184 29.3
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 2.9e-08 65.5 49 53.1
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.9e-07 62.8 35 80.0
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.1e-06 59.3 35 80.0
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.0e-06 57.8 43 67.4


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