Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g086440.4 Solanum lycopersicum HOM05D004871 ORTHO05D005755 1.4e-105 386.3 198 100.0
Sopen02g031150 Solanum pennellii HOM05D004871 ORTHO05D005755 1.2e-96 356.7 185 98.4
PGSC0003DMG400012633 Solanum tuberosum HOM05D004871 ORTHO05D005755 2.3e-92 342.4 185 93.5
CAN.G473.11 Capsicum annuum HOM05D004871 ORTHO05D005755 6.0e-77 291.2 187 80.2
Peaxi162Scf00129g00168 Petunia axillaris HOM05D004871 ORTHO05D005755 3.2e-62 242.3 187 67.9
Peaxi162Scf00129g01652 Petunia axillaris HOM05D004871 ORTHO05D005755 3.9e-60 235.3 187 66.3
Cc07_g01680 Coffea canephora HOM05D004871 ORTHO05D005755 3.2e-46 189.1 192 58.3
Hma1.2p1_2120F.1_g314420 Hydrangea macrophylla HOM05D004871 ORTHO05D005755 5.9e-40 168.3 206 51.5
TAR622G0125 Trochodendron aralioides HOM05D004871 ORTHO05D005755 5.0e-39 165.2 204 52.5
Duzib147G1217 Durio zibethinus HOM05D004871 ORTHO05D005755 2.5e-38 162.9 214 47.7
SalBow2G2412 Salvia bowleyana HOM05D004871 ORTHO05D005755 3.2e-38 162.5 191 51.8
CSS0032397 Camellia sinensis var. sinensis HOM05D004871 ORTHO05D005755 2.7e-37 159.5 197 52.3
MSTRG.24039 Avicennia marina HOM05D004871 ORTHO05D005755 3.6e-37 159.1 194 50.0
Potri.017G069800 Populus trichocarpa HOM05D004871 ORTHO05D005755 4.7e-37 158.7 219 50.2
DCAR_021722 Daucus carota HOM05D004871 ORTHO05D005755 7.9e-37 157.9 189 49.7
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.0e-36 157.5 207 47.3
Thecc.04G017200 Theobroma cacao HOM05D004871 ORTHO05D005755 1.8e-36 156.8 212 49.5
COL.COLO4_29115 Corchorus olitorius HOM05D004871 ORTHO05D005755 3.9e-36 155.6 212 47.6
Gorai.001G265000 Gossypium raimondii HOM05D004871 ORTHO05D005755 3.9e-36 155.6 213 46.0
Gohir.D07G229900 Gossypium hirsutum HOM05D004871 ORTHO05D005755 6.7e-36 154.8 207 46.4
Sc16g0004350 Simmondsia chinensis HOM05D004871 ORTHO05D005755 2.0e-35 153.3 206 46.6
RcHm_v2.0_Chr2g0172801 Rosa chinensis HOM05D004871 ORTHO05D005755 3.3e-35 152.5 198 50.5
TWI12G0316 Tripterygium wilfordii HOM05D004871 ORTHO05D005755 3.3e-35 152.5 212 47.6
Atru.chr6.2393 Acer truncatum HOM05D004871 ORTHO05D005755 1.7e-34 150.2 215 46.5
Phvul.008G154600 Phaseolus vulgaris HOM05D004871 ORTHO05D005755 1.7e-34 150.2 192 49.5
MD09G1027100 Malus domestica HOM05D004871 ORTHO05D005755 2.2e-34 149.8 203 49.8
Oeu054623.1 Olea europaea HOM05D004871 ORTHO05D005755 2.2e-34 149.8 197 48.7
Dinv35106 Davidia involucrata HOM05D004871 ORTHO05D005755 2.8e-34 149.4 188 51.6
Gorai.012G064200 Gossypium raimondii HOM05D004871 ORTHO05D005755 2.8e-34 149.4 214 44.9
Nn3g16731 Nelumbo nucifera HOM05D004871 ORTHO05D005755 3.7e-34 149.1 219 46.1
Nn3g16736 Nelumbo nucifera HOM05D004871 ORTHO05D005755 3.7e-34 149.1 219 46.1
Sabra17G0062100 Salix brachista HOM05D004871 ORTHO05D005755 3.7e-34 149.1 222 47.3
Lju41C42T3 Lonicera japonica HOM05D004871 ORTHO05D005755 4.8e-34 148.7 200 51.0
FAN02G2556 Fragaria x ananassa HOM05D004871 ORTHO05D005755 6.3e-34 148.3 196 47.4
FAN14G1702 Fragaria x ananassa HOM05D004871 ORTHO05D005755 6.3e-34 148.3 196 46.4
Prupe.3G291600 Prunus persica HOM05D004871 ORTHO05D005755 6.3e-34 148.3 204 48.5
Cpa.g.sc130.82 Carica papaya HOM05D004871 ORTHO05D005755 8.2e-34 147.9 214 50.5
Gohir.D04G057500 Gossypium hirsutum HOM05D004871 ORTHO05D005755 1.1e-33 147.5 215 45.6
MD17G1027100 Malus domestica HOM05D004871 ORTHO05D005755 1.1e-33 147.5 205 46.3
FvH4_6g51200 Fragaria vesca HOM05D004871 ORTHO05D005755 2.4e-33 146.4 196 46.4
SGA_v2.0_scaffold18G08277 Striga asiatica HOM05D004871 ORTHO05D005755 3.1e-33 146.0 200 48.5
CANSAT64G1143 Cannabis sativa HOM05D004871 ORTHO05D005755 5.3e-33 145.2 206 45.6
FAN05G1656 Fragaria x ananassa HOM05D004871 ORTHO05D005755 5.3e-33 145.2 196 46.4
Gohir.A05G355800 Gossypium hirsutum HOM05D004871 ORTHO05D005755 5.3e-33 145.2 214 45.8
Lj7C599T13 Lonicera japonica HOM05D004871 ORTHO05D005755 1.2e-32 144.1 207 47.8
Ciclev10015079m.g Citrus clementina HOM05D004871 ORTHO05D005755 1.6e-32 143.7 219 46.1
Lj1g0007322 Lotus japonicus HOM05D004871 ORTHO05D005755 2.6e-32 142.9 206 45.6
ClCG10G013890 Citrullus lanatus HOM05D004871 ORTHO05D005755 3.5e-32 142.5 198 43.9
Migut.H00077 Erythranthe guttata HOM05D004871 ORTHO05D005755 3.5e-32 142.5 203 45.3
QL02p074723 Quercus lobata HOM05D004871 ORTHO05D005755 4.5e-32 142.1 206 46.1
Glyma.19G068600 Glycine max HOM05D004871 ORTHO05D005755 7.7e-32 141.4 200 50.0
CiPaw.03G043700 Carya illinoinensis HOM05D004871 ORTHO05D005755 2.2e-31 139.8 209 46.4
PGR083G0754 Punica granatum HOM05D004871 ORTHO05D005755 1.5e-30 137.1 201 47.3
Haze_14739 Corylus avellana HOM05D004871 ORTHO05D005755 5.5e-30 135.2 207 45.9
THA.LOC104825322 Tarenaya hassleriana HOM05D004871 ORTHO05D005755 7.2e-30 134.8 207 46.4
Rhsim08G0049400 Rhododendron simsii HOM05D004871 ORTHO05D005755 9.4e-30 134.4 205 46.3
Cfa007369 Carpinus fangiana HOM05D004871 ORTHO05D005755 2.7e-29 132.9 211 45.5
Lsat_1_v5_gn_0_47681 Lactuca sativa HOM05D004871 ORTHO05D005755 2.7e-29 132.9 190 45.8
Manes.15G150700 Manihot esculenta HOM05D004871 ORTHO05D005755 3.6e-29 132.5 216 45.8
Eucgr.H01852 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.0e-28 131.0 216 44.4
Eucgr.J02242 Eucalyptus grandis HOM05D004871 ORTHO05D005755 1.0e-28 131.0 215 43.3
PSO832G2649 Papaver somniferum HOM05D004871 ORTHO05D005755 1.0e-28 131.0 208 43.3
Oeu018139.1 Olea europaea HOM05D004871 ORTHO05D005755 1.8e-28 130.2 194 44.3
vmacro23391 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.8e-28 130.2 206 45.1
TAR371G0422 Trochodendron aralioides HOM05D004871 ORTHO05D005755 1.5e-27 127.1 197 46.2
Rhsim08G0050100 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.0e-27 126.7 196 45.4
Cc00_g26710 Coffea canephora HOM05D004871 ORTHO05D005755 4.4e-27 125.6 173 50.3
Glyma.16G071200 Glycine max HOM05D004871 ORTHO05D005755 4.4e-27 125.6 191 46.6
PSO063G1038 Papaver somniferum HOM05D004871 ORTHO05D005755 7.5e-27 124.8 206 41.3
Sed0007166 Sechium edule HOM05D004871 ORTHO05D005755 7.5e-27 124.8 192 40.6
MELO3C026581.2 Cucumis melo HOM05D004871 ORTHO05D005755 1.3e-26 124.0 199 39.7
Rhsim08G0049600 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.3e-26 124.0 192 45.8
Lalb_Chr14g0362771 Lupinus albus HOM05D004871 ORTHO05D005755 2.8e-26 122.9 202 44.1
CsaV3_3G042800 Cucumis sativus L. HOM05D004871 ORTHO05D005755 3.7e-26 122.5 198 39.4
Medtr7g033720 Medicago truncatula HOM05D004871 ORTHO05D005755 3.7e-26 122.5 191 44.5
unitig_899.g14805 Utricularia gibba HOM05D004871 ORTHO05D005755 4.1e-25 119.0 194 44.3
HanXRQChr17g0548491 Helianthus annuus HOM05D004871 ORTHO05D005755 5.3e-25 118.6 189 42.9
CiPaw.04G028400 Carya illinoinensis HOM05D004871 ORTHO05D005755 7.0e-25 118.2 210 41.4
CDE08G0710 Ceratophyllum demersum HOM05D004871 ORTHO05D005755 1.2e-24 117.5 189 45.0
Rhsim08G0048900 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.7e-24 116.3 195 42.6
TAR371G0152 Trochodendron aralioides HOM05D004871 ORTHO05D005755 4.5e-24 115.5 192 44.3
Aqoxy5G03783 Aquilegia oxysepala HOM05D004871 ORTHO05D005755 1.0e-23 114.4 215 38.6
Ca_23007_v3 Cicer arietinum L. HOM05D004871 ORTHO05D005755 1.3e-23 114.0 202 43.6
ATR0686G244 Amborella trichopoda HOM05D004871 ORTHO05D005755 1.7e-23 113.6 193 42.5
TPR.G1076 Trifolium pratense HOM05D004871 ORTHO05D005755 1.7e-23 113.6 149 49.0
SalBow1G4779 Salvia bowleyana HOM05D004871 ORTHO05D005755 2.2e-23 113.2 194 42.8
Rhsim08G0050500 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.5e-22 110.5 202 42.1
vmacro18283 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.5e-22 109.8 210 41.9
vmacro23390 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 2.5e-22 109.8 210 41.9
HPP92_009906 Vanilla planifolia HOM05D004871 ORTHO05D005755 3.2e-22 109.4 220 39.1
Rhsim08G0050400 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.2e-22 109.0 201 42.3
Thhalv10028043m.g Eutrema salsugineum HOM05D004871 ORTHO05D005755 5.5e-22 108.6 211 42.7
BcaB06g27513 Brassica carinata HOM05D004871 ORTHO05D005755 2.3e-20 103.2 206 41.3
BraA04t17009Z Brassica rapa HOM05D004871 ORTHO05D005755 3.0e-20 102.8 203 41.4
Rhsim08G0050600 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.0e-20 102.4 215 38.1
Actinidia35771 Actinidia chinensis HOM05D004871 ORTHO05D005755 5.2e-20 102.1 187 41.2
AT5G40470 Arabidopsis thaliana HOM05D004871 ORTHO05D005755 8.8e-20 101.3 223 39.5
Sp7g01440 Schrenkiella parvula HOM05D004871 ORTHO05D005755 8.8e-20 101.3 218 38.1
A04p13500 Brassica napus HOM05D004871 ORTHO05D005755 1.2e-19 100.9 203 40.4
Lalb_Chr24g0402861 Lupinus albus HOM05D004871 ORTHO05D005755 2.0e-19 100.1 210 42.4
C04p47280 Brassica napus HOM05D004871 ORTHO05D005755 2.6e-19 99.8 206 40.3
BolC4t26328H Brassica oleracea HOM05D004871 ORTHO05D005755 2.6e-19 99.8 206 40.3
Zm00001eb246170 Zea mays HOM05D004871 ORTHO05D005755 2.6e-19 99.8 197 39.1
Rhsim08G0050200 Rhododendron simsii HOM05D004871 ORTHO05D005755 4.4e-19 99.0 192 41.7
vmacro18285 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 4.4e-19 99.0 201 40.3
vmacro23392 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 4.4e-19 99.0 201 40.3
TAR371G1027 Trochodendron aralioides HOM05D004871 ORTHO05D005755 2.8e-18 96.3 196 39.3
CARHR261520 Cardamine hirsuta HOM05D004871 ORTHO05D005755 3.7e-18 95.9 209 37.8
AL7G49360 Arabidopsis lyrata HOM05D004871 ORTHO05D005755 1.4e-17 94.0 226 36.7
Rhsim08G0050000 Rhododendron simsii HOM05D004871 ORTHO05D005755 7.0e-17 91.7 190 37.4
Rhsim08G0049300 Rhododendron simsii HOM05D004871 ORTHO05D005755 1.2e-16 90.9 212 37.7
Carub.0007s3511 Capsella rubella HOM05D004871 ORTHO05D005755 2.7e-16 89.7 215 35.8
HanXRQChr15g0475301 Helianthus annuus HOM05D004871 ORTHO05D005755 1.3e-15 87.4 182 39.0
Aa31LG9G1150 Aethionema arabicum HOM05D004871 ORTHO05D005755 8.5e-15 84.7 224 33.5
Rhsim08G0049900 Rhododendron simsii HOM05D004871 ORTHO05D005755 8.5e-15 84.7 197 38.6
Nn1g05920 Nelumbo nucifera HOM05D004871 ORTHO05D005755 1.6e-13 80.5 123 42.3
SMO298G0062 Selaginella moellendorffii HOM05D004871 ORTHO05D005755 4.7e-13 79.0 193 33.2
ATR0589G064 Amborella trichopoda HOM05D004871 ORTHO05D005755 2.0e-11 73.6 190 34.2
ATR0762G040 Amborella trichopoda HOM05D004871 ORTHO05D005755 3.4e-11 72.8 191 35.1
Nitab4.5_0003318g0120 Nicotiana tabacum HOM05D004871 ORTHO05D005755 8.3e-10 68.2 56 62.5
Nitab4.5_0002468g0010 Nicotiana tabacum HOM05D004871 ORTHO05D005755 5.4e-09 65.5 56 60.7
Eucgr.L00043 Eucalyptus grandis HOM05D004871 ORTHO05D005755 2.7e-08 63.2 76 52.6
vmacro18284 Vaccinium macrocarpon HOM05D004871 ORTHO05D005755 1.7e-07 60.5 90 37.8
Peaxi162Scf00129g01633 Petunia axillaris HOM05D004871 ORTHO05D005755 6.6e-07 58.5 187 28.9
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 2.5e-06 56.6 51 60.8


User provided reference genes

Program Settings