Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g084170.2 Solanum lycopersicum HOM05D003404 ORTHO05D392787 5.1e-108 394.4 202 100.0
Sopen02g028920 Solanum pennellii HOM05D001465 ORTHO05D013629 5.5e-17 92.0 52 92.3
Solyc02g084113.1 Solanum lycopersicum HOM05D010460 ORTHO05D014683 2.3e-07 60.1 68 51.5
PGSC0003DMG401020715 Solanum tuberosum HOM05D001465 ORTHO05D001434 5.1e-07 58.9 42 71.4
Peaxi162Scf00011g01927 Petunia axillaris HOM05D003404 ORTHO05D004052 8.7e-07 58.2 73 46.6
CAN.G855.55 Capsicum annuum HOM05D003404 ORTHO05D004052 1.1e-06 57.8 80 45.0
Nitab4.5_0003247g0080 Nicotiana tabacum HOM05D003404 ORTHO05D004052 1.1e-06 57.8 80 45.0
Nitab4.5_0007689g0020 Nicotiana tabacum HOM05D003404 ORTHO05D004052 1.1e-06 57.8 80 45.0
CAN.G855.56 Capsicum annuum HOM05D001465 ORTHO05D001434 1.5e-06 57.4 42 69.0
Nitab4.5_0003247g0050 Nicotiana tabacum HOM05D001465 ORTHO05D001434 1.5e-06 57.4 42 69.0
Solyc01g103010.4 Solanum lycopersicum HOM05D003404 ORTHO05D004052 1.5e-06 57.4 80 45.0
Sopen01g045420 Solanum pennellii HOM05D003404 ORTHO05D004052 1.5e-06 57.4 80 45.0
EL10Ac6g13982 Beta vulgaris HOM05D003404 ORTHO05D004052 1.9e-06 57.0 80 43.8
MSTRG.16466 Avicennia marina HOM05D003404 ORTHO05D004052 2.5e-06 56.6 80 43.8
Solyc01g102990.3 Solanum lycopersicum HOM05D001465 ORTHO05D001434 2.5e-06 56.6 42 71.4
Sopen01g045400 Solanum pennellii HOM05D001465 ORTHO05D001434 2.5e-06 56.6 42 71.4
Sopen02g028880 Solanum pennellii HOM05D010460 ORTHO05D037645 2.5e-06 56.6 37 83.8
CSS0015679 Camellia sinensis var. sinensis HOM05D003404 ORTHO05D004052 3.3e-06 56.2 80 43.8
SGA_v2.0_scaffold254G45235 Striga asiatica HOM05D003404 ORTHO05D004052 3.3e-06 56.2 80 43.8
Nitab4.5_0005164g0010 Nicotiana tabacum HOM05D001465 ORTHO05D001434 4.3e-06 55.8 42 66.7
Cc02_g23620 Coffea canephora HOM05D003404 ORTHO05D004052 5.7e-06 55.5 80 43.8
Migut.B00720 Erythranthe guttata HOM05D003404 ORTHO05D004052 5.7e-06 55.5 80 42.5
Peaxi162Scf00011g01923 Petunia axillaris HOM05D001465 ORTHO05D001434 5.7e-06 55.5 42 66.7
MBI03_g34266_MAGBIO Magnolia biondii HOM05D001465 ORTHO05D001434 7.4e-06 55.1 73 43.8
AUR62042960 Chenopodium quinoa HOM05D003404 ORTHO05D004052 9.7e-06 54.7 80 42.5
AUR62043067 Chenopodium quinoa HOM05D003404 ORTHO05D004052 9.7e-06 54.7 80 42.5
HanXRQChr15g0469691 Helianthus annuus HOM05D003404 ORTHO05D004052 9.7e-06 54.7 80 42.5
Lsat_1_v5_gn_9_83361 Lactuca sativa HOM05D003404 ORTHO05D004052 9.7e-06 54.7 80 42.5
Lj5C285G4 Lonicera japonica HOM05D003404 ORTHO05D004052 9.7e-06 54.7 80 42.5
Sabra01G0174500 Salix brachista HOM05D003404 ORTHO05D004052 9.7e-06 54.7 80 42.5
HPP92_001482 Vanilla planifolia HOM05D003404 ORTHO05D004052 9.7e-06 54.7 80 42.5


User provided reference genes

Program Settings