Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g081220.3 Solanum lycopersicum HOM05D000128 ORTHO05D016409 1.6e-36 155.6 82 100.0
Sopen02g025860 Solanum pennellii HOM05D000128 ORTHO05D000059 2.8e-28 128.3 69 95.7
PGSC0003DMG400016716 Solanum tuberosum HOM05D000128 ORTHO05D000059 1.8e-27 125.6 69 92.8
CAN.G1681.6 Capsicum annuum HOM05D000128 ORTHO05D000059 1.4e-24 115.9 69 84.1
Nitab4.5_0007410g0030 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.1e-20 102.1 72 75.0
Nitab4.5_0010422g0020 Nicotiana tabacum HOM05D000128 ORTHO05D000059 4.8e-20 100.9 72 73.6
CSS0024469 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 1.4e-08 62.8 68 47.1
Duzib192G0181 Durio zibethinus HOM05D000128 ORTHO05D000059 7.1e-08 60.5 66 53.0
Haze_05922 Corylus avellana HOM05D000128 ORTHO05D000059 1.2e-07 59.7 48 60.4
Atru.chr10.758 Acer truncatum HOM05D000128 ORTHO05D000059 2.7e-07 58.5 62 50.0
CSS0002881 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 4.6e-07 57.8 48 60.4
TAR633G0756 Trochodendron aralioides HOM05D000128 ORTHO05D000059 6.1e-07 57.4 54 55.6
TAR633G2190 Trochodendron aralioides HOM05D000128 ORTHO05D000059 6.1e-07 57.4 61 52.5
Thecc.06G013400 Theobroma cacao HOM05D000128 ORTHO05D000059 1.0e-06 56.6 77 44.2
Psat7g092960 Pisum sativum HOM05D000128 ORTHO05D000059 1.8e-06 55.8 67 47.8
GSVIVG01021736001 Vitis vinifera HOM05D000128 ORTHO05D000059 1.8e-06 55.8 69 50.7
CSS0007743 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 2.3e-06 55.5 70 50.0
TWI38G1597 Tripterygium wilfordii HOM05D000128 ORTHO05D000059 2.3e-06 55.5 70 54.3
GSVIVG01021629001 Vitis vinifera HOM05D000128 ORTHO05D000059 2.3e-06 55.5 65 44.6
CiPaw.09G143900 Carya illinoinensis HOM05D000128 ORTHO05D000059 3.0e-06 55.1 77 40.3
CsaV3_6G052560 Cucumis sativus L. HOM05D000128 ORTHO05D000059 3.0e-06 55.1 67 49.3
Potri.001G462200 Populus trichocarpa HOM05D000128 ORTHO05D000059 3.0e-06 55.1 69 46.4
Potri.001G462466 Populus trichocarpa HOM05D000128 ORTHO05D000059 3.0e-06 55.1 69 46.4
Eucgr.D00076 Eucalyptus grandis HOM05D000128 ORTHO05D000059 3.9e-06 54.7 75 46.7
TWI38G1365 Tripterygium wilfordii HOM05D000128 ORTHO05D000059 3.9e-06 54.7 49 57.1
TWI15G0356 Tripterygium wilfordii HOM05D000128 ORTHO05D000059 6.7e-06 53.9 61 52.5
CSS0006503 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 8.7e-06 53.5 70 50.0
CSS0032453 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 8.7e-06 53.5 46 56.5
CSS0043291 Camellia sinensis var. sinensis HOM05D000128 ORTHO05D000059 8.7e-06 53.5 46 56.5
Duzib235G0207 Durio zibethinus HOM05D000128 ORTHO05D000059 8.7e-06 53.5 66 45.5
Manes.14G125200 Manihot esculenta HOM05D000128 ORTHO05D000059 8.7e-06 53.5 75 41.3
Oeu041140.1 Olea europaea HOM05D000128 ORTHO05D000059 8.7e-06 53.5 69 49.3
QL05p064020 Quercus lobata HOM05D000128 ORTHO05D000059 8.7e-06 53.5 70 48.6


User provided reference genes

Program Settings