Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g062830.2 Solanum lycopersicum HOM05D004329 ORTHO05D005516 2.0e-77 292.4 150 100.0
Solyc02g062810.4 Solanum lycopersicum HOM05D004329 ORTHO05D005516 2.4e-41 172.6 96 90.6
Sopen02g013850 Solanum pennellii HOM05D004329 ORTHO05D005516 3.1e-41 172.2 96 90.6
CAN.G1210.1 Capsicum annuum HOM05D004329 ORTHO05D005516 2.0e-40 169.5 96 88.5
Solyc03g093970.3 Solanum lycopersicum HOM05D004329 ORTHO05D005516 3.4e-40 168.7 96 87.5
Sopen03g024820 Solanum pennellii HOM05D004329 ORTHO05D005516 3.4e-40 168.7 96 87.5
Nitab4.5_0007718g0050 Nicotiana tabacum HOM05D004329 ORTHO05D005516 7.6e-40 167.5 96 87.5
Nitab4.5_0009429g0030 Nicotiana tabacum HOM05D004329 ORTHO05D005516 7.6e-40 167.5 96 87.5
Peaxi162Scf00935g00018 Petunia axillaris HOM05D004329 ORTHO05D005516 2.9e-39 165.6 96 85.4
Oeu012844.2 Olea europaea HOM05D004329 ORTHO05D005516 2.4e-38 162.5 96 83.3
SalBow1G7365 Salvia bowleyana HOM05D004329 ORTHO05D005516 9.3e-38 160.6 106 78.3
Cc09_g07980 Coffea canephora HOM05D004329 ORTHO05D005516 2.1e-37 159.5 97 79.4
Cc09_g07990 Coffea canephora HOM05D004329 ORTHO05D005516 2.1e-37 159.5 97 79.4
MSTRG.22850 Avicennia marina HOM05D004329 ORTHO05D005516 2.7e-37 159.1 96 83.3
SGA_v2.0_scaffold40G15626 Striga asiatica HOM05D004329 ORTHO05D005516 4.6e-37 158.3 96 80.2
Migut.I00617 Erythranthe guttata HOM05D004329 ORTHO05D005516 7.9e-37 157.5 96 81.2
Lsat_1_v5_gn_4_84600 Lactuca sativa HOM05D004329 ORTHO05D005516 1.3e-36 156.8 96 81.2
Actinidia18306 Actinidia chinensis HOM05D004329 ORTHO05D005516 3.9e-36 155.2 96 80.2
Dinv13728 Davidia involucrata HOM05D004329 ORTHO05D005516 1.5e-35 153.3 96 78.1
HanXRQChr09g0273891 Helianthus annuus HOM05D004329 ORTHO05D005516 1.5e-35 153.3 96 78.1
Sabra15G0125900 Salix brachista HOM05D004329 ORTHO05D005516 1.5e-35 153.3 108 70.4
Rhsim08G0196600 Rhododendron simsii HOM05D004329 ORTHO05D005516 1.9e-35 152.9 96 78.1
DCAR_016350 Daucus carota HOM05D004329 ORTHO05D005516 2.5e-35 152.5 96 78.1
vmacro06162 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 2.5e-35 152.5 96 78.1
CSS0022050 Camellia sinensis var. sinensis HOM05D004329 ORTHO05D005516 3.3e-35 152.1 96 78.1
Sabra12G0078600 Salix brachista HOM05D004329 ORTHO05D005516 4.3e-35 151.8 96 77.1
Hma1.2p1_0493F.1_g164990 Hydrangea macrophylla HOM05D004329 ORTHO05D005516 5.6e-35 151.4 96 79.2
Duzib205G0720 Durio zibethinus HOM05D004329 ORTHO05D005516 7.4e-35 151.0 96 78.1
TWI39G0623 Tripterygium wilfordii HOM05D004329 ORTHO05D005516 7.4e-35 151.0 96 77.1
Prupe.5G142700 Prunus persica HOM05D004329 ORTHO05D005516 9.6e-35 150.6 96 76.0
Lj5A87T69 Lonicera japonica HOM05D004329 ORTHO05D005516 1.3e-34 150.2 96 77.1
Sed0023904 Sechium edule HOM05D004329 ORTHO05D005516 1.3e-34 150.2 96 76.0
GSVIVG01008641001 Vitis vinifera HOM05D004329 ORTHO05D005516 1.3e-34 150.2 96 76.0
Cpa.g.sc13.162 Carica papaya HOM05D004329 ORTHO05D005516 1.6e-34 149.8 96 76.0
ECA232G2772 Erigeron canadensis HOM05D004329 ORTHO05D005516 1.6e-34 149.8 96 76.0
Potri.012G106200 Populus trichocarpa HOM05D004329 ORTHO05D005516 1.6e-34 149.8 96 76.0
Thecc.03G139600 Theobroma cacao HOM05D004329 ORTHO05D005516 1.6e-34 149.8 96 77.1
ClCG03G012650 Citrullus lanatus HOM05D004329 ORTHO05D005516 2.1e-34 149.4 96 76.0
Potri.015G105600 Populus trichocarpa HOM05D004329 ORTHO05D005516 2.1e-34 149.4 96 76.0
Sed0013101 Sechium edule HOM05D004329 ORTHO05D005516 2.1e-34 149.4 96 76.0
CANSAT80G0883 Cannabis sativa HOM05D004329 ORTHO05D005516 2.8e-34 149.1 96 76.0
Manes.06G126200 Manihot esculenta HOM05D004329 ORTHO05D005516 2.8e-34 149.1 96 76.0
Manes.14G045200 Manihot esculenta HOM05D004329 ORTHO05D005516 2.8e-34 149.1 96 77.1
Atru.chr6.1908 Acer truncatum HOM05D004329 ORTHO05D005516 3.7e-34 148.7 96 76.0
Actinidia36840 Actinidia chinensis HOM05D004329 ORTHO05D005516 3.7e-34 148.7 96 75.0
CANSAT80G0741 Cannabis sativa HOM05D004329 ORTHO05D005516 3.7e-34 148.7 96 76.0
COL.COLO4_37247 Corchorus olitorius HOM05D004329 ORTHO05D005516 3.7e-34 148.7 96 76.0
Gorai.001G054500 Gossypium raimondii HOM05D004329 ORTHO05D005516 3.7e-34 148.7 96 77.1
SGA_v2.0_scaffold74G24730 Striga asiatica HOM05D004329 ORTHO05D005516 3.7e-34 148.7 115 68.7
Actinidia08906 Actinidia chinensis HOM05D000877 ORTHO05D001509 4.8e-34 148.3 96 76.0
MD14G1148000 Malus domestica HOM05D004329 ORTHO05D005516 4.8e-34 148.3 96 74.0
Aqoxy4G00231 Aquilegia oxysepala HOM05D004329 ORTHO05D005516 6.2e-34 147.9 96 74.0
Dinv23217 Davidia involucrata HOM05D004329 ORTHO05D005516 6.2e-34 147.9 96 76.0
QL10p000650 Quercus lobata HOM05D004329 ORTHO05D005516 6.2e-34 147.9 96 75.0
Gohir.A07G047200 Gossypium hirsutum HOM05D004329 ORTHO05D005516 8.1e-34 147.5 96 76.0
Gohir.D07G051400 Gossypium hirsutum HOM05D004329 ORTHO05D005516 8.1e-34 147.5 96 76.0
MD06G1131700 Malus domestica HOM05D004329 ORTHO05D005516 8.1e-34 147.5 96 74.0
vmacro19178 Vaccinium macrocarpon HOM05D004329 ORTHO05D005516 1.1e-33 147.1 96 76.0
Cfa018712 Carpinus fangiana HOM05D004329 ORTHO05D005516 1.8e-33 146.4 96 75.0
CsaV3_1G043340 Cucumis sativus L. HOM05D004329 ORTHO05D005516 1.8e-33 146.4 96 74.0
CiPaw.09G139600 Carya illinoinensis HOM05D004329 ORTHO05D005516 2.4e-33 146.0 96 75.0
TAR374G0799 Trochodendron aralioides HOM05D004329 ORTHO05D005516 2.4e-33 146.0 96 76.0
Aa31LG11G1550 Aethionema arabicum HOM05D004329 ORTHO05D005516 3.1e-33 145.6 95 76.8
MBI13_g13130_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 3.1e-33 145.6 96 75.0
Nn4g22142 Nelumbo nucifera HOM05D004329 ORTHO05D005516 3.1e-33 145.6 96 74.0
PGR083G0006 Punica granatum HOM05D004329 ORTHO05D005516 3.1e-33 145.6 96 74.0
Hund02504 Selenicereus undatus HOM05D004329 ORTHO05D005516 3.1e-33 145.6 135 57.8
Haze_07104 Corylus avellana HOM05D004329 ORTHO05D005516 4.0e-33 145.2 96 74.0
FvH4_5g09400 Fragaria vesca HOM05D004329 ORTHO05D005516 5.3e-33 144.8 96 74.0
FAN13G1968 Fragaria x ananassa HOM05D004329 ORTHO05D005516 5.3e-33 144.8 96 74.0
FAN18G1836 Fragaria x ananassa HOM05D004329 ORTHO05D005516 5.3e-33 144.8 96 74.0
RcHm_v2.0_Chr7g0188791 Rosa chinensis HOM05D004329 ORTHO05D005516 5.3e-33 144.8 96 74.0
TPR.G12807 Trifolium pratense HOM05D004329 ORTHO05D005516 5.3e-33 144.8 96 74.0
BcaC03g18112 Brassica carinata HOM05D004329 ORTHO05D005516 6.9e-33 144.4 99 70.7
Ciclev10031005m.g Citrus clementina HOM05D004329 ORTHO05D005516 6.9e-33 144.4 96 74.0
ATR1096G004 Amborella trichopoda HOM05D004329 ORTHO05D005516 9.0e-33 144.1 96 74.0
AUR62041693 Chenopodium quinoa HOM05D004329 ORTHO05D005516 9.0e-33 144.1 96 71.9
AUR62044173 Chenopodium quinoa HOM05D004329 ORTHO05D005516 9.0e-33 144.1 96 71.9
Lj4g0026438 Lotus japonicus HOM05D004329 ORTHO05D005516 9.0e-33 144.1 96 72.9
Phvul.002G282000 Phaseolus vulgaris HOM05D004329 ORTHO05D005516 9.0e-33 144.1 96 72.9
Eucgr.F03808 Eucalyptus grandis HOM05D004329 ORTHO05D005516 1.2e-32 143.7 96 70.8
FAN04G0329 Fragaria x ananassa HOM05D004329 ORTHO05D005516 1.2e-32 143.7 96 72.9
Glyma.05G200600 Glycine max HOM05D004329 ORTHO05D005516 1.2e-32 143.7 96 71.9
VMungo0251G1423 Vigna mungo HOM05D004329 ORTHO05D005516 1.2e-32 143.7 96 72.9
arahy.Tifrunner.gnm1.ann1.HJ5J7F Arachis hypogaea HOM05D004329 ORTHO05D005516 1.5e-32 143.3 101 71.3
MELO3C015126.2 Cucumis melo HOM05D004329 ORTHO05D005516 1.5e-32 143.3 96 71.9
BcaC01g02451 Brassica carinata HOM05D004329 ORTHO05D005516 2.0e-32 142.9 96 74.0
A06p28670 Brassica napus HOM05D004329 ORTHO05D005516 2.0e-32 142.9 96 74.0
C03p65130 Brassica napus HOM05D004329 ORTHO05D005516 2.0e-32 142.9 96 74.0
BolC3t18767H Brassica oleracea HOM05D004329 ORTHO05D005516 2.0e-32 142.9 96 74.0
FAN08G1859 Fragaria x ananassa HOM05D004329 ORTHO05D005516 2.0e-32 142.9 96 72.9
arahy.Tifrunner.gnm1.ann1.IBL9WM Arachis hypogaea HOM05D004329 ORTHO05D005516 2.6e-32 142.5 96 71.9
CARHR275760 Cardamine hirsuta HOM05D004329 ORTHO05D005516 2.6e-32 142.5 96 74.0
CDE07G0688 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 2.6e-32 142.5 96 70.8
THA.LOC104819422 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 2.6e-32 142.5 96 74.0
BraA06t25807Z Brassica rapa HOM05D004329 ORTHO05D005516 4.5e-32 141.7 96 72.9
Carub.0008s2266 Capsella rubella HOM05D004329 ORTHO05D005516 4.5e-32 141.7 96 74.0
Medtr8g100110 Medicago truncatula HOM05D004329 ORTHO05D005516 4.5e-32 141.7 96 70.8
Ah.11g046840 Amaranthus hybridus HOM05D004329 ORTHO05D005516 5.8e-32 141.4 96 70.8
AL8G38730 Arabidopsis lyrata HOM05D004329 ORTHO05D005516 5.8e-32 141.4 96 72.9
AT5G61970 Arabidopsis thaliana HOM05D004329 ORTHO05D005516 5.8e-32 141.4 96 72.9
Ca_16811_v3 Cicer arietinum L. HOM05D004329 ORTHO05D005516 5.8e-32 141.4 96 70.8
Sc22g0003470 Simmondsia chinensis HOM05D004329 ORTHO05D005516 5.8e-32 141.4 96 70.8
THA.LOC104823903 Tarenaya hassleriana HOM05D004329 ORTHO05D005516 5.8e-32 141.4 96 72.9
BcaB07g29807 Brassica carinata HOM05D004329 ORTHO05D005516 7.6e-32 141.0 96 72.9
BolC2t12235H Brassica oleracea HOM05D004329 ORTHO05D005516 7.6e-32 141.0 96 72.9
Psat7g039240 Pisum sativum HOM05D004329 ORTHO05D005516 7.6e-32 141.0 96 70.8
EL10Ac7g17942 Beta vulgaris HOM05D004329 ORTHO05D005516 9.9e-32 140.6 96 69.8
Glyma.08G008000 Glycine max HOM05D004329 ORTHO05D005516 9.9e-32 140.6 96 70.8
C02p61780 Brassica napus HOM05D004329 ORTHO05D005516 1.3e-31 140.2 96 72.9
BraA02t09122Z Brassica rapa HOM05D004329 ORTHO05D005516 1.3e-31 140.2 96 72.9
Thhalv10003854m.g Eutrema salsugineum HOM05D004329 ORTHO05D005516 1.3e-31 140.2 96 72.9
Sp2g25150 Schrenkiella parvula HOM05D004329 ORTHO05D005516 2.2e-31 139.4 96 71.9
BcaB02g09609 Brassica carinata HOM05D004329 ORTHO05D005516 2.9e-31 139.0 96 71.9
PSO017G7154 Papaver somniferum HOM05D004329 ORTHO05D005516 2.9e-31 139.0 96 71.9
PSO478G2811 Papaver somniferum HOM05D004329 ORTHO05D005516 2.9e-31 139.0 96 71.9
Lalb_Chr07g0183781 Lupinus albus HOM05D004329 ORTHO05D005516 4.9e-31 138.3 96 69.8
Carub.0005s0295 Capsella rubella HOM05D004329 ORTHO05D005516 4.2e-30 135.2 96 71.9
Zm00001eb327290 Zea mays HOM05D004329 ORTHO05D005516 4.6e-29 131.7 96 68.8
SEGI_15405 Sequoiadendron giganteum HOM05D004329 ORTHO05D005516 1.8e-28 129.8 95 65.3
Solyc02g062840.1 Solanum lycopersicum HOM05D004329 ORTHO05D005516 8.7e-28 127.5 75 81.3
Mapoly0153s0017 Marchantia polymorpha HOM05D004329 ORTHO05D005516 5.5e-22 108.2 95 56.8
AagrBONN_evm.TU.Sc2ySwM_228.1186 Anthoceros agrestis HOM05D004329 ORTHO05D005516 9.3e-22 107.5 94 57.4
AUR62009528 Chenopodium quinoa HOM05D004329 ORTHO05D005516 9.3e-22 107.5 96 59.4
PSO081G0143 Papaver somniferum HOM05D004329 ORTHO05D005516 1.6e-21 106.7 108 52.8
Pp3c15_22190 Physcomitrium patens HOM05D004329 ORTHO05D005516 1.0e-20 104.0 95 52.6
CBR_g20988 Chara braunii HOM05D004329 ORTHO05D005516 1.8e-20 103.2 96 53.1
unitig_32.g11043 Utricularia gibba HOM05D004329 ORTHO05D005516 3.0e-20 102.4 150 43.3
SMO356G0738 Selaginella moellendorffii HOM05D004329 ORTHO05D005516 4.3e-19 98.6 95 51.6
MBI13_g15007_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 3.1e-17 92.4 56 78.6
MBI13_g43178_MAGBIO Magnolia biondii HOM05D004329 ORTHO05D005516 3.1e-17 92.4 56 78.6
PGSC0003DMG400015501 Solanum tuberosum HOM05D004329 ORTHO05D005516 4.5e-16 88.6 49 89.8
CDE04G3457 Ceratophyllum demersum HOM05D004329 ORTHO05D005516 1.2e-13 80.5 96 47.9
Cre06.g267100 Chlamydomonas reinhardtii HOM05D004329 ORTHO05D005516 5.1e-12 75.1 102 44.1
MCO15G338 Micromonas commoda HOM05D004329 ORTHO05D005516 6.7e-12 74.7 104 44.2


User provided reference genes

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