Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g043885.1 Solanum lycopersicum HOM05D006159 ORTHO05D007624 1.0e-51 206.5 102 100.0
Sopen09g019910 Solanum pennellii HOM05D006159 ORTHO05D007624 6.1e-41 170.6 98 87.8
Nitab4.5_0005248g0030 Nicotiana tabacum HOM05D006159 ORTHO05D007624 1.1e-29 133.3 107 66.4
Peaxi162Scf00095g10135 Petunia axillaris HOM05D006159 ORTHO05D007624 3.1e-29 131.7 106 65.1
Nitab4.5_0001438g0090 Nicotiana tabacum HOM05D006159 ORTHO05D007624 1.2e-28 129.8 107 64.5
Dinv28707 Davidia involucrata HOM05D006159 ORTHO05D007624 1.1e-13 80.1 109 45.0
QL01p025515 Quercus lobata HOM05D006159 ORTHO05D007624 6.6e-11 70.9 105 41.0
Potri.013G154200 Populus trichocarpa HOM05D006159 ORTHO05D007624 5.6e-10 67.8 101 41.6
Haze_24438 Corylus avellana HOM05D006159 ORTHO05D007624 1.6e-09 66.2 109 39.4
Prupe.6G045100 Prunus persica HOM05D006159 ORTHO05D007624 8.0e-09 63.9 109 36.7
SalBow2G3538 Salvia bowleyana HOM05D006159 ORTHO05D007624 8.0e-09 63.9 103 38.8
Atru.chr1.2561 Acer truncatum HOM05D006159 ORTHO05D007624 1.1e-08 63.5 112 39.3
Actinidia34484 Actinidia chinensis HOM05D006159 ORTHO05D007624 1.4e-08 63.2 109 34.9
PGR031G1374 Punica granatum HOM05D006159 ORTHO05D007624 2.3e-08 62.4 109 35.8
Sabra13G0124000 Salix brachista HOM05D006159 ORTHO05D007624 2.3e-08 62.4 101 37.6
CSS0033482 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 3.1e-08 62.0 109 37.6
CiPaw.13G066700 Carya illinoinensis HOM05D006159 ORTHO05D007624 4.0e-08 61.6 111 36.9
Hma1.2p1_1586F.1_g292125 Hydrangea macrophylla HOM05D006159 ORTHO05D007624 5.2e-08 61.2 109 37.6
TWI31G0474 Tripterygium wilfordii HOM05D006159 ORTHO05D007624 6.8e-08 60.8 98 41.8
CSS0020536 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 1.5e-07 59.7 108 37.0
Rhsim01G0241600 Rhododendron simsii HOM05D006159 ORTHO05D007624 2.0e-07 59.3 104 35.6
Gohir.D03G144100 Gossypium hirsutum HOM05D006159 ORTHO05D007624 2.6e-07 58.9 109 38.5
Gorai.003G151400 Gossypium raimondii HOM05D006159 ORTHO05D007624 2.6e-07 58.9 109 38.5
LjContig00141g0000315 Lotus japonicus HOM05D006159 ORTHO05D007624 2.6e-07 58.9 98 34.7
Ciclev10003830m.g Citrus clementina HOM05D006159 ORTHO05D007624 3.4e-07 58.5 119 35.3
TAR633G1181 Trochodendron aralioides HOM05D006159 ORTHO05D007624 3.4e-07 58.5 107 39.3
Migut.N00748 Erythranthe guttata HOM05D006159 ORTHO05D007624 4.4e-07 58.2 102 39.2
PSO170G6759 Papaver somniferum HOM05D006159 ORTHO05D007624 4.4e-07 58.2 103 35.0
SGA_v2.0_scaffold5G02753 Striga asiatica HOM05D006159 ORTHO05D007624 5.8e-07 57.8 98 40.8
vmacro14626 Vaccinium macrocarpon HOM05D006159 ORTHO05D007624 5.8e-07 57.8 104 33.7
Gohir.A03G024400 Gossypium hirsutum HOM05D006159 ORTHO05D007624 7.5e-07 57.4 108 38.9
Thecc.09G360700 Theobroma cacao HOM05D006159 ORTHO05D007624 9.8e-07 57.0 103 34.0
MSTRG.17900 Avicennia marina HOM05D006159 ORTHO05D007624 1.3e-06 56.6 111 36.0
COL.COLO4_11182 Corchorus olitorius HOM05D006159 ORTHO05D007624 1.7e-06 56.2 103 36.9
Manes.18G138800 Manihot esculenta HOM05D006159 ORTHO05D007624 1.7e-06 56.2 104 38.5
PSO017G5079 Papaver somniferum HOM05D006159 ORTHO05D007624 1.7e-06 56.2 103 38.8
Aqoxy4G02147 Aquilegia oxysepala HOM05D006159 ORTHO05D007624 2.9e-06 55.5 108 36.1
DCAR_012721 Daucus carota HOM05D006159 ORTHO05D007624 2.9e-06 55.5 123 35.0
Lalb_Chr10g0103671 Lupinus albus HOM05D006159 ORTHO05D007624 2.9e-06 55.5 103 36.9
arahy.Tifrunner.gnm1.ann1.3A3S4A Arachis hypogaea HOM05D006159 ORTHO05D007624 3.7e-06 55.1 98 38.8
Actinidia23185 Actinidia chinensis HOM05D006159 ORTHO05D007624 4.9e-06 54.7 102 39.2
arahy.Tifrunner.gnm1.ann1.C311ZQ Arachis hypogaea HOM05D006159 ORTHO05D007624 4.9e-06 54.7 98 39.8
Duzib168G0394 Durio zibethinus HOM05D006159 ORTHO05D007624 4.9e-06 54.7 103 35.0
Phvul.008G250200 Phaseolus vulgaris HOM05D006159 ORTHO05D007624 4.9e-06 54.7 98 34.7
Thhalv10016529m.g Eutrema salsugineum HOM05D006159 ORTHO05D007624 6.4e-06 54.3 100 38.0
Glyma.02G233500 Glycine max HOM05D006159 ORTHO05D007624 6.4e-06 54.3 98 33.7
GSVIVG01024604001 Vitis vinifera HOM05D006159 ORTHO05D007624 6.4e-06 54.3 98 32.7
Aa31LG5G6390 Aethionema arabicum HOM05D006159 ORTHO05D007624 8.3e-06 53.9 103 37.9
Psat0s1662g0080 Pisum sativum HOM05D006159 ORTHO05D007624 8.3e-06 53.9 98 32.7


User provided reference genes

Program Settings