Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g005070.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 6.5e-160 567.4 295 100.0
Sopen03g011240 Solanum pennellii HOM05D002538 ORTHO05D002334 1.2e-100 370.5 313 67.7
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.7e-99 366.7 342 62.6
Solyc08g062250.3 Solanum lycopersicum HOM05D002538 ORTHO05D002334 4.2e-82 308.9 226 74.8
PGSC0003DMG400021840 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-76 290.4 298 55.0
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.2e-74 282.7 280 56.8
PGSC0003DMG400022355 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.6e-71 271.2 377 45.6
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.3e-70 270.8 355 48.7
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 8.1e-70 268.1 355 49.6
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.2e-58 229.6 425 39.1
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.5e-57 226.1 136 86.8
Sopen08g012520 Solanum pennellii HOM05D002261 ORTHO05D002334 8.7e-56 221.5 136 85.3
Sopen12g016550 Solanum pennellii HOM05D002261 ORTHO05D002334 7.4e-55 218.4 136 83.8
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.1e-54 216.9 289 45.3
Solyc08g042070.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 6.1e-49 198.7 109 93.6
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 6.9e-45 185.3 98 91.8
Solyc05g017795.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.6e-44 183.3 101 89.1
Sopen11g020370 Solanum pennellii HOM05D002261 ORTHO05D002334 6.5e-43 178.7 102 86.3
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-42 177.9 388 35.3
Solyc11g013730.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.2e-42 176.4 129 72.9
Solyc01g066612.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 8.2e-38 161.8 99 81.8
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-37 161.0 248 44.8
PGSC0003DMG401024222 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.0e-36 157.1 171 52.6
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.9e-35 153.3 101 72.3
PGSC0003DMG400009893 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.5e-35 151.8 102 71.6
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-34 151.4 94 75.5
Solyc07g014750.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 3.2e-34 149.8 83 85.5
PGSC0003DMG400021293 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.2e-33 147.9 109 68.8
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-31 141.4 94 71.3
PGSC0003DMG400015528 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.5e-31 141.0 109 67.0
PGSC0003DMG400024760 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.8e-30 136.0 97 71.1
PGSC0003DMG400003268 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-28 129.4 97 68.0
CAN.G170.120 Capsicum annuum HOM05D002261 ORTHO05D002334 1.9e-26 124.0 180 37.8
Solyc09g055990.2 Solanum lycopersicum HOM05D000049 ORTHO05D002334 1.7e-22 110.9 77 71.4
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.3e-21 105.9 98 55.1
CAN.G933.9 Capsicum annuum HOM05D002261 ORTHO05D002334 6.5e-19 99.0 85 50.6
CAN.G15.23 Capsicum annuum HOM05D002261 ORTHO05D002334 1.1e-18 98.2 284 29.6
PGSC0003DMG400025489 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.1e-18 98.2 65 67.7
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-18 97.8 107 43.9
Peaxi162Scf00345g00126 Petunia axillaris HOM05D002261 ORTHO05D002334 1.9e-18 97.4 333 27.9
Nitab4.5_0005791g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.2e-18 96.3 252 31.0
Peaxi162Scf00111g00518 Petunia axillaris HOM05D002261 ORTHO05D002334 1.6e-17 94.4 308 29.2
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-17 93.2 87 52.9
CAN.G217.14 Capsicum annuum HOM05D002261 ORTHO05D002334 1.8e-16 90.9 86 48.8
Nitab4.5_0000230g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.0e-16 90.1 245 30.2
CAN.G499.5 Capsicum annuum HOM05D002261 ORTHO05D002334 5.2e-16 89.4 95 50.5
Nitab4.5_0004247g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-16 89.4 229 30.1
Peaxi162Scf00211g00164 Petunia axillaris HOM05D002261 ORTHO05D002334 8.8e-16 88.6 188 30.9
Peaxi162Scf00558g00118 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-15 87.8 389 23.4
Nitab4.5_0005023g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-15 87.0 68 57.4
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 3.4e-15 86.7 75 62.7
Nitab4.5_0001709g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.7e-14 83.2 70 54.3
Nitab4.5_0003524g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.4e-13 81.3 98 45.9
Nitab4.5_0005054g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.1e-13 80.1 96 38.5
Solyc03g150112.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.6e-12 77.8 47 76.6
Nitab4.5_0006911g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.0e-12 77.4 110 32.7
Nitab4.5_0000402g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-12 77.0 87 44.8
Nitab4.5_0019209g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-12 77.0 257 26.5
Peaxi162Scf00357g00621 Petunia axillaris HOM05D002261 ORTHO05D002334 3.5e-12 76.6 90 36.7
Peaxi162Scf00371g00312 Petunia axillaris HOM05D002261 ORTHO05D002334 4.5e-12 76.3 98 37.8
Peaxi162Scf01253g00018 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-11 75.1 90 36.7
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-11 74.7 90 36.7
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 1.3e-11 74.7 90 36.7
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.3e-11 74.7 87 41.4
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 1.7e-11 74.3 337 26.1
Peaxi162Scf00098g01535 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-11 73.9 90 36.7
Peaxi162Scf00951g00019 Petunia axillaris HOM05D002261 ORTHO05D002334 2.2e-11 73.9 104 39.4
PGSC0003DMG400006953 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.8e-11 73.2 54 70.4
Nitab4.5_0000600g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.0e-11 72.8 94 33.0
Nitab4.5_0004225g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.0e-11 72.8 81 44.4
PGSC0003DMG400017531 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.0e-11 72.8 87 41.4
Nitab4.5_0009754g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.5e-11 72.0 79 39.2
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 8.5e-11 72.0 109 33.9
CAN.G217.13 Capsicum annuum HOM05D002261 ORTHO05D002334 1.5e-10 71.2 93 44.1
Nitab4.5_0000659g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-10 71.2 80 37.5
Nitab4.5_0002427g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.9e-10 70.9 95 40.0
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 3.2e-10 70.1 146 34.2
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.5e-10 69.3 64 53.1
Nitab4.5_0001659g0090 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.2e-10 68.9 86 40.7
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.2e-10 68.9 100 34.0
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.4e-10 68.6 80 46.2
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 9.4e-10 68.6 82 41.5
Sopen01g022130 Solanum pennellii HOM05D002261 ORTHO05D002334 1.2e-09 68.2 96 35.4
PGSC0003DMG400026495 Solanum tuberosum HOM05D002261 ORTHO05D026165 1.6e-09 67.8 79 43.0
Solyc04g025320.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.1e-09 67.4 86 38.4
CAN.G165.12 Capsicum annuum HOM05D002261 ORTHO05D002334 2.7e-09 67.0 304 23.7
Nitab4.5_0007866g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.7e-09 67.0 73 43.8
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-09 67.0 82 36.6
Peaxi162Scf00028g00075 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-09 67.0 92 37.0
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-09 67.0 96 36.5
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 2.7e-09 67.0 83 36.1
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 2.7e-09 67.0 83 34.9
Nitab4.5_0009976g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.6e-09 66.6 228 28.5
Nitab4.5_0000890g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.7e-09 66.2 107 37.4
Peaxi162Scf00842g00011 Petunia axillaris HOM05D002261 ORTHO05D002334 4.7e-09 66.2 98 37.8
Nitab4.5_0000231g0450 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.1e-09 65.9 232 29.3
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.1e-09 65.9 81 42.0
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 6.1e-09 65.9 91 42.9
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-08 65.1 337 24.0
Peaxi162Scf07758g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 1.0e-08 65.1 75 37.3
Sopen07g011000 Solanum pennellii HOM05D000004 ORTHO05D002334 1.0e-08 65.1 83 33.7
Peaxi162Scf00752g00610 Petunia axillaris HOM05D002261 ORTHO05D002334 1.4e-08 64.7 90 40.0
Nitab4.5_0000336g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-08 64.3 96 32.3
Nitab4.5_0004688g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.8e-08 64.3 193 27.5
Peaxi162Scf00007g01337 Petunia axillaris HOM05D002261 ORTHO05D002334 1.8e-08 64.3 90 42.2
Peaxi162Scf00044g00014 Petunia axillaris HOM05D002261 ORTHO05D002334 1.8e-08 64.3 66 45.5
Nitab4.5_0000119g0230 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.3e-08 63.9 348 22.7
Nitab4.5_0003011g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.3e-08 63.9 73 35.6
CAN.G280.21 Capsicum annuum HOM05D002261 ORTHO05D002334 4.0e-08 63.2 84 38.1
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.0e-08 63.2 86 37.2
CAN.G223.2 Capsicum annuum HOM05D002261 ORTHO05D002334 5.2e-08 62.8 85 36.5
Nitab4.5_0000754g0300 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-08 62.8 81 39.5
Nitab4.5_0001522g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.2e-08 62.8 80 33.8
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.8e-08 62.4 285 26.7
Peaxi162Scf00047g00443 Petunia axillaris HOM05D002261 ORTHO05D002334 6.8e-08 62.4 78 39.7
Peaxi162Scf00586g00013 Petunia axillaris HOM05D002261 ORTHO05D002334 6.8e-08 62.4 77 37.7
Sopen06g020220 Solanum pennellii HOM05D036688 ORTHO05D037762 6.8e-08 62.4 86 41.9
Sopen07g022080 Solanum pennellii HOM05D002261 ORTHO05D002334 6.8e-08 62.4 83 33.7
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.8e-08 62.0 108 35.2
Nitab4.5_0011225g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.8e-08 62.0 102 33.3
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 1.2e-07 61.6 337 23.7
CAN.G255.16 Capsicum annuum HOM05D002261 ORTHO05D002334 1.5e-07 61.2 83 31.3
Nitab4.5_0004260g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.5e-07 61.2 115 33.9
Peaxi162Scf00285g00007 Petunia axillaris HOM05D002261 ORTHO05D002334 1.5e-07 61.2 83 33.7
Peaxi162Scf00206g00046 Petunia axillaris HOM05D002261 ORTHO05D002334 2.0e-07 60.8 80 36.2
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-07 60.8 90 32.2
Nitab4.5_0013103g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-07 60.5 92 34.8
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.6e-07 60.5 82 37.8
CAN.G619.1 Capsicum annuum HOM05D002261 ORTHO05D002334 3.4e-07 60.1 84 36.9
Nitab4.5_0000842g0080 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-07 60.1 61 42.6
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-07 60.1 200 27.0
Nitab4.5_0007441g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.4e-07 60.1 93 30.1
Nitab4.5_0000877g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.4e-07 59.7 96 28.1
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.4e-07 59.7 55 45.5
Nitab4.5_0006660g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.4e-07 59.7 88 37.5
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-07 58.9 127 37.0
Nitab4.5_0006835g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-07 58.9 108 29.6
Nitab4.5_0007866g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.8e-07 58.5 82 35.4
Sopen02g008580 Solanum pennellii HOM05D002261 ORTHO05D002334 9.8e-07 58.5 83 32.5
Nitab4.5_0000105g0350 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.3e-06 58.2 108 29.6
Nitab4.5_0003349g0060 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-06 57.8 61 47.5
Nitab4.5_0009868g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-06 57.8 81 35.8
PGSC0003DMG400025596 Solanum tuberosum HOM05D000072 ORTHO05D002334 1.7e-06 57.8 64 46.9
Nitab4.5_0000230g0260 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-06 57.4 54 50.0
Nitab4.5_0009613g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-06 57.4 108 29.6
Nitab4.5_0004746g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-06 57.0 82 34.1
CAN.G135.43 Capsicum annuum HOM05D002261 ORTHO05D002334 3.7e-06 56.6 165 27.3
Nitab4.5_0000113g0330 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.8e-06 56.2 108 28.7
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.8e-06 56.2 383 25.1
Nitab4.5_0001504g0150 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.3e-06 55.8 61 44.3
Sopen05g027490 Solanum pennellii HOM05D002261 ORTHO05D002334 6.3e-06 55.8 88 34.1
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 6.3e-06 55.8 50 58.0
Nitab4.5_0005917g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.3e-06 55.5 108 33.3
Peaxi162Scf00795g00069 Petunia axillaris HOM05D002261 ORTHO05D002334 8.3e-06 55.5 80 32.5


User provided reference genes

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