Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 2.3e-93 345.5 168 100.0
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 8.7e-77 290.4 149 91.3
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.1e-76 290.0 151 90.1
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 9.0e-74 280.4 150 88.7
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.7e-72 276.2 133 100.0
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 4.9e-72 274.6 133 99.2
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 7.9e-70 267.3 141 90.1
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 5.3e-66 254.6 130 91.5
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 2.3e-61 239.2 127 87.4
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 7.4e-60 234.2 127 85.0
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.3e-59 233.4 127 83.5
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 1.3e-59 233.4 135 80.7
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 1.8e-58 229.6 129 80.6
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.4e-58 229.2 147 75.5
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 3.1e-58 228.8 126 82.5
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.3e-58 228.0 147 74.8
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 6.9e-58 227.6 137 75.2
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.2e-57 226.9 147 74.1
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 2.0e-57 226.1 126 82.5
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.0e-57 226.1 131 79.4
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 2.6e-57 225.7 126 82.5
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 2.6e-57 225.7 147 74.8
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 4.5e-57 224.9 127 81.1
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 4.5e-57 224.9 131 78.6
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 7.7e-57 224.2 127 80.3
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 1.0e-56 223.8 126 82.5
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.0e-56 223.8 127 81.1
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.0e-56 223.8 127 80.3
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.0e-56 223.8 147 73.5
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.3e-56 223.4 126 82.5
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.7e-56 223.0 133 76.7
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 2.2e-56 222.6 126 80.2
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 5.0e-56 221.5 129 79.8
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 5.0e-56 221.5 131 77.9
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 6.5e-56 221.1 127 80.3
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 8.5e-56 220.7 126 81.0
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 1.1e-55 220.3 130 80.8
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 1.4e-55 219.9 129 80.6
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 1.9e-55 219.5 127 80.3
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 3.2e-55 218.8 126 79.4
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 4.2e-55 218.4 127 79.5
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 4.2e-55 218.4 134 76.1
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 4.2e-55 218.4 127 78.7
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 5.5e-55 218.0 131 80.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 7.2e-55 217.6 129 78.3
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 7.2e-55 217.6 129 78.3
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 9.4e-55 217.2 126 80.2
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.2e-54 216.9 129 77.5
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 1.2e-54 216.9 130 76.2
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 2.1e-54 216.1 127 78.0
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 2.7e-54 215.7 149 69.1
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 3.6e-54 215.3 129 76.7
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 4.6e-54 214.9 129 75.2
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 7.9e-54 214.2 129 77.5
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 7.9e-54 214.2 133 73.7
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 1.0e-53 213.8 129 76.7
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 1.4e-53 213.4 126 78.6
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 1.4e-53 213.4 127 77.2
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 2.3e-53 212.6 145 69.7
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 2.3e-53 212.6 128 76.6
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 2.3e-53 212.6 127 80.3
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 3.0e-53 212.2 148 69.6
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 3.0e-53 212.2 126 78.6
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 3.9e-53 211.8 126 77.0
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 3.9e-53 211.8 129 76.0
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 6.7e-53 211.1 128 75.8
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 6.7e-53 211.1 128 75.8
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 8.8e-53 210.7 125 80.0
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 8.8e-53 210.7 129 73.6
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 1.1e-52 210.3 127 76.4
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 1.1e-52 210.3 125 72.8
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.1e-52 210.3 113 87.6
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 1.5e-52 209.9 145 69.0
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.5e-52 209.9 127 77.2
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 2.0e-52 209.5 133 72.9
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 4.3e-52 208.4 124 78.2
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 4.3e-52 208.4 131 72.5
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 7.4e-52 207.6 133 72.9
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 7.4e-52 207.6 165 63.0
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 9.7e-52 207.2 132 72.0
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 9.7e-52 207.2 128 75.0
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 9.7e-52 207.2 131 71.8
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.7e-51 206.5 132 71.2
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.7e-51 206.5 132 71.2
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 1.7e-51 206.5 123 77.2
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 2.8e-51 205.7 133 69.9
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 2.8e-51 205.7 133 69.9
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 3.7e-51 205.3 132 70.5
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 6.3e-51 204.5 126 73.0
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 1.5e-49 199.9 128 68.0
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 3.4e-49 198.7 113 81.4
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 9.4e-47 190.7 126 65.9
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 2.7e-46 189.1 128 65.6
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 1.8e-45 186.4 125 66.4
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 8.8e-45 184.1 116 72.4
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.5e-44 183.3 127 63.0
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.1e-42 177.2 126 65.1
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 2.0e-41 172.9 126 58.7
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.3e-40 170.2 126 58.7
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 2.5e-39 166.0 110 75.5
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 4.4e-36 155.2 125 54.4
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 1.2e-33 147.1 118 58.5
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 3.2e-31 139.0 80 82.5
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 2.3e-29 132.9 129 48.8
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 4.0e-29 132.1 130 50.0
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 1.2e-28 130.6 120 51.7
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.0e-28 129.8 110 60.9
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 3.4e-28 129.0 152 45.4
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 1.6e-25 120.2 93 65.6
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 2.2e-19 99.8 54 79.6
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 2.8e-19 99.4 53 77.4
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 3.7e-19 99.0 68 69.1
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 5.9e-17 91.7 58 63.8
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 1.0e-16 90.9 53 71.7
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.3e-16 90.5 53 77.4
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.5e-09 65.9 43 67.4
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.9e-09 65.1 43 65.1
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 1.3e-08 63.9 41 73.2


User provided reference genes

Program Settings