Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g095680.2 Solanum lycopersicum HOM05D000257 ORTHO05D003333 1.4e-97 359.8 207 100.0
Sopen01g039420 Solanum pennellii HOM05D000257 ORTHO05D007882 3.8e-50 202.2 129 96.9
PGSC0003DMG400000098 Solanum tuberosum HOM05D000257 ORTHO05D003333 3.3e-49 199.1 129 96.1
Peaxi162Scf00786g00442 Petunia axillaris HOM05D000257 ORTHO05D003333 3.7e-37 159.1 131 80.9
Nitab4.5_0008279g0070 Nicotiana tabacum HOM05D000257 ORTHO05D003333 3.2e-36 156.0 197 57.4
Nitab4.5_0000838g0050 Nicotiana tabacum HOM05D000257 ORTHO05D003333 1.0e-34 151.0 131 77.1
CAN.G986.27 Capsicum annuum HOM05D000257 ORTHO05D003333 1.3e-29 134.0 155 63.9
Dinv32569 Davidia involucrata HOM05D000257 ORTHO05D003333 7.1e-12 75.1 130 43.8
Actinidia20226 Actinidia chinensis HOM05D000257 ORTHO05D003333 2.1e-11 73.6 129 40.3
Migut.B01850 Erythranthe guttata HOM05D000257 ORTHO05D003333 4.6e-11 72.4 130 40.0
Atru.chr5.645 Acer truncatum HOM05D000257 ORTHO05D003333 7.8e-11 71.6 129 38.0
MSTRG.17332 Avicennia marina HOM05D000257 ORTHO05D003333 1.0e-10 71.2 129 39.5
Lj9P595T36 Lonicera japonica HOM05D000257 ORTHO05D003333 1.7e-10 70.5 130 39.2
GSVIVG01027077001 Vitis vinifera HOM05D000001 ORTHO05D000003 3.9e-10 69.3 121 38.8
SGA_v2.0_scaffold5G03008 Striga asiatica HOM05D000257 ORTHO05D003333 8.7e-10 68.2 129 34.9
Manes.01G247400 Manihot esculenta HOM05D000257 ORTHO05D003333 4.3e-09 65.9 130 37.7
Oeu008690.3 Olea europaea HOM05D000257 ORTHO05D003333 7.3e-09 65.1 129 37.2
Haze_15636 Corylus avellana HOM05D000257 ORTHO05D003333 9.6e-09 64.7 129 35.7
Nn3g19054 Nelumbo nucifera HOM05D000257 ORTHO05D003333 9.6e-09 64.7 131 37.4
FAN25G3475 Fragaria x ananassa HOM05D000257 ORTHO05D003333 2.1e-08 63.5 129 39.5
CSS0029850 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D003333 3.6e-08 62.8 130 37.7
TAR636G2230 Trochodendron aralioides HOM05D000257 ORTHO05D003333 4.7e-08 62.4 122 38.5
Prupe.3G002000 Prunus persica HOM05D000257 ORTHO05D003333 6.2e-08 62.0 129 37.2
COL.COLO4_06306 Corchorus olitorius HOM05D000257 ORTHO05D003333 8.1e-08 61.6 130 37.7
FvH4_3g25450 Fragaria vesca HOM05D000257 ORTHO05D003333 8.1e-08 61.6 129 38.8
FAN11G0498 Fragaria x ananassa HOM05D000257 ORTHO05D003333 8.1e-08 61.6 129 38.8
FAN16G0491 Fragaria x ananassa HOM05D000257 ORTHO05D003333 8.1e-08 61.6 129 38.8
Sabra14G0070900 Salix brachista HOM05D000257 ORTHO05D003333 8.1e-08 61.6 130 38.5
SalBow3G3470 Salvia bowleyana HOM05D000257 ORTHO05D003333 8.1e-08 61.6 131 38.9
CSS0045794 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D003333 1.4e-07 60.8 130 37.7
Cfa003818 Carpinus fangiana HOM05D000257 ORTHO05D003333 2.4e-07 60.1 129 34.9
Ciclev10023767m.g Citrus clementina HOM05D000257 ORTHO05D000003 2.4e-07 60.1 129 34.9
Cc02_g39170 Coffea canephora HOM05D000257 ORTHO05D003333 4.0e-07 59.3 129 36.4
RcHm_v2.0_Chr5g0046651 Rosa chinensis HOM05D000257 ORTHO05D003333 5.3e-07 58.9 129 38.8
Gorai.001G155500 Gossypium raimondii HOM05D000257 ORTHO05D000003 9.0e-07 58.2 130 40.0
vmacro13173 Vaccinium macrocarpon HOM05D000257 ORTHO05D003333 9.0e-07 58.2 129 36.4
Gohir.A07G138500 Gossypium hirsutum HOM05D000257 ORTHO05D003333 1.2e-06 57.8 130 39.2
Cpa.g.sc273.8 Carica papaya HOM05D000257 ORTHO05D003333 1.5e-06 57.4 129 34.9
Gohir.D07G143600 Gossypium hirsutum HOM05D000257 ORTHO05D003333 1.5e-06 57.4 131 37.4
Potri.002G169300 Populus trichocarpa HOM05D000257 ORTHO05D003333 2.0e-06 57.0 131 35.9
CiPaw.02G039500 Carya illinoinensis HOM05D000257 ORTHO05D003333 3.4e-06 56.2 129 33.3
Thecc.01G344800 Theobroma cacao HOM05D000257 ORTHO05D003333 3.4e-06 56.2 130 36.9
Potri.014G096800 Populus trichocarpa HOM05D000257 ORTHO05D003333 9.9e-06 54.7 130 36.9
Sabra02G0142900 Salix brachista HOM05D000257 ORTHO05D003333 9.9e-06 54.7 131 35.1


User provided reference genes

Program Settings