Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 0.0e+00 1156.4 588 100.0
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 0.0e+00 1124.0 588 97.3
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 3.2e-251 871.7 595 74.5
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 5.4e-198 694.9 600 60.2
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 5.0e-180 635.2 661 55.5
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 2.1e-178 629.8 609 56.2
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 2.8e-178 629.4 608 54.6
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 4.4e-176 622.1 577 58.1
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 5.4e-174 615.1 600 54.5
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 9.2e-174 614.4 591 53.5
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.7e-173 612.8 642 55.9
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.7e-172 610.1 612 53.9
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 3.9e-172 609.0 601 53.9
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.3e-171 605.9 594 53.7
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 4.3e-171 605.5 594 54.2
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 4.0e-169 599.0 598 53.8
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 6.8e-169 598.2 612 52.5
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.4e-166 590.5 655 51.5
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 2.7e-165 586.3 675 49.5
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 4.3e-163 578.9 590 51.2
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.6e-162 577.0 611 51.2
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.6e-162 577.0 596 51.8
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 2.1e-162 576.6 586 51.5
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.8e-162 576.2 597 52.1
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 4.7e-162 575.5 598 50.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.8e-161 573.5 595 51.3
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 6.8e-161 571.6 587 51.3
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.0e-160 570.1 593 50.6
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 3.4e-160 569.3 590 52.4
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 4.9e-159 565.5 608 48.7
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 4.9e-159 565.5 604 50.5
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.1e-158 564.3 588 50.9
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 2.4e-158 563.1 603 50.4
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 2.4e-158 563.1 591 50.8
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 2.4e-158 563.1 598 49.5
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 5.4e-158 562.0 593 49.2
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 9.3e-158 561.2 590 51.0
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.6e-157 558.9 619 48.5
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.5e-155 553.9 616 48.2
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 5.6e-155 552.0 592 48.1
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.3e-154 550.8 578 53.6
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.6e-154 550.4 590 50.0
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.1e-154 550.1 619 48.0
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.1e-154 550.1 609 49.8
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.1e-154 550.1 597 48.2
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 4.0e-153 545.8 589 49.4
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.6e-152 543.1 589 49.9
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 3.4e-152 542.7 589 50.8
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.3e-151 540.8 588 48.6
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.3e-151 540.8 591 48.4
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.7e-151 540.4 609 49.3
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 3.8e-151 539.3 603 49.8
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 8.4e-151 538.1 601 49.4
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 4.6e-149 532.3 586 50.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 1.3e-146 524.2 638 45.5
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 6.2e-146 521.9 590 50.5
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.8e-145 520.4 593 45.5
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 2.4e-145 520.0 655 43.5
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 9.0e-145 518.1 616 46.1
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.1e-142 511.1 605 47.1
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 9.3e-142 508.1 551 50.8
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 3.5e-141 506.1 567 49.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 2.5e-139 500.0 638 44.2
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 7.6e-136 488.4 592 45.9
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 3.8e-135 486.1 644 45.2
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 8.4e-135 485.0 610 47.0
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 8.4e-135 485.0 584 46.2
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 9.0e-129 464.9 606 40.8
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 2.0e-128 463.8 597 44.6
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 8.4e-127 458.4 602 44.4
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 2.5e-126 456.8 588 44.2
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 4.1e-121 439.5 588 42.2
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 5.3e-121 439.1 597 42.5
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.2e-120 438.0 540 46.3
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 7.7e-120 435.3 594 42.6
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 2.9e-119 433.3 605 41.3
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 6.5e-119 432.2 592 42.2
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 2.5e-118 430.3 594 42.1
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.2e-117 427.9 564 43.4
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.6e-117 427.6 533 43.5
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 5.7e-115 419.1 475 47.2
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.7e-114 417.5 594 41.1
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 9.1e-113 411.8 302 72.8
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 3.2e-110 403.3 592 39.7
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 5.5e-110 402.5 589 41.8
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 7.2e-110 402.1 594 40.6
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.2e-109 401.4 529 42.5
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.6e-109 401.0 440 48.2
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 4.4e-107 392.9 486 46.1
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 2.0e-104 384.0 502 44.0
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.2e-102 375.6 379 54.4
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.0e-101 372.1 379 54.4
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.0e-100 371.7 401 48.4
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.1e-97 360.1 375 53.3
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 1.1e-94 351.7 422 44.8
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.4e-92 344.7 582 36.6
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.0e-89 332.4 379 49.6
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 7.7e-88 328.9 326 53.4
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 8.3e-82 308.9 557 35.9
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 2.5e-78 297.4 443 39.3
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 4.1e-73 280.0 275 54.9
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 4.3e-62 243.4 159 81.8
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 9.5e-54 215.7 454 34.1
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.2e-45 188.7 517 28.0
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.8e-44 184.9 559 28.6
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.0e-39 169.1 637 26.5
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 1.9e-38 164.9 608 24.5
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 5.6e-38 163.3 267 37.5
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 5.3e-36 156.8 591 24.9
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 9.3e-33 146.0 154 46.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.3e-31 142.1 288 33.7
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.0e-31 141.0 89 71.9
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 6.2e-29 133.3 96 71.9
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.1e-28 131.0 161 41.0
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 2.1e-13 81.6 70 57.1
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 2.8e-13 81.3 123 41.5
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.3e-10 72.4 63 54.0
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 6.5e-10 70.1 62 53.2
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 1.4e-09 68.9 252 24.2
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.4e-09 68.9 68 50.0
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.2e-09 67.8 63 52.4
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 8.7e-07 59.7 51 54.9


User provided reference genes

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