Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 5.3e-190 667.5 339 100.0
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 1.2e-189 666.4 339 99.7
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 1.5e-173 612.8 339 89.7
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 3.4e-173 611.7 339 89.4
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.1e-171 606.7 339 88.2
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 9.4e-171 603.6 339 87.6
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 6.1e-170 600.9 338 87.6
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 2.0e-168 595.9 339 86.4
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 3.7e-167 591.7 339 86.4
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 3.7e-167 591.7 339 86.4
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 6.9e-166 587.4 335 85.7
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 9.1e-166 587.0 334 86.2
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 1.5e-165 586.3 339 85.5
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 2.0e-165 585.9 339 85.0
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 4.5e-165 584.7 339 85.0
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 5.9e-165 584.3 334 86.2
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 5.9e-165 584.3 334 85.9
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 7.7e-165 583.9 332 86.4
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 7.7e-165 583.9 332 86.4
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 7.7e-165 583.9 332 86.4
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 1.0e-164 583.6 341 84.8
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 1.7e-164 582.8 339 84.1
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 1.7e-164 582.8 335 85.7
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 2.2e-164 582.4 335 85.1
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.2e-164 582.4 341 84.5
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 2.2e-164 582.4 339 85.3
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 2.9e-164 582.0 339 85.3
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 3.8e-164 581.6 332 86.1
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 6.5e-164 580.9 339 84.7
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 8.5e-164 580.5 339 85.0
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 1.9e-163 579.3 339 84.1
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 2.5e-163 578.9 339 85.3
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.5e-163 578.9 339 84.1
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 3.2e-163 578.6 339 83.5
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 5.5e-163 577.8 339 84.7
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 9.4e-163 577.0 339 83.5
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 9.4e-163 577.0 339 84.1
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.6e-162 576.2 339 83.5
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 2.1e-162 575.9 338 85.8
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 2.1e-162 575.9 338 84.6
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 2.7e-162 575.5 339 83.8
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 4.7e-162 574.7 339 82.9
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 4.7e-162 574.7 338 83.4
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 6.1e-162 574.3 341 83.3
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 6.1e-162 574.3 339 84.1
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 8.0e-162 573.9 341 84.5
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 8.0e-162 573.9 339 83.2
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 8.0e-162 573.9 339 84.1
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.0e-161 573.5 337 83.4
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 1.0e-161 573.5 339 83.8
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 1.4e-161 573.2 335 84.2
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 1.4e-161 573.2 342 83.6
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 2.3e-161 572.4 338 84.3
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 3.0e-161 572.0 342 83.6
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 3.0e-161 572.0 339 83.2
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 3.9e-161 571.6 342 83.0
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 3.9e-161 571.6 338 84.3
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 3.9e-161 571.6 339 82.3
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 5.2e-161 571.2 338 84.6
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 6.7e-161 570.9 342 83.3
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 6.7e-161 570.9 332 84.6
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 6.7e-161 570.9 339 83.2
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 1.1e-160 570.1 338 83.1
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 1.5e-160 569.7 362 79.0
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 2.6e-160 568.9 339 82.3
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 2.6e-160 568.9 339 82.9
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 3.3e-160 568.5 332 83.7
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 3.3e-160 568.5 339 82.6
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 5.7e-160 567.8 342 82.2
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 5.7e-160 567.8 339 82.0
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 7.4e-160 567.4 339 80.8
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 9.7e-160 567.0 315 88.9
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 1.3e-159 566.6 341 83.0
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 1.7e-159 566.2 339 81.7
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 3.7e-159 565.1 322 87.3
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 3.7e-159 565.1 376 76.3
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 4.8e-159 564.7 339 82.6
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 1.1e-158 563.5 334 82.9
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 2.4e-158 562.4 345 81.4
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 2.4e-158 562.4 339 82.0
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 2.4e-158 562.4 328 84.5
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 9.1e-158 560.5 339 80.2
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 9.1e-158 560.5 328 83.2
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.2e-157 560.1 339 80.8
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 2.0e-157 559.3 339 82.0
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 3.5e-157 558.5 328 84.5
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 4.5e-157 558.1 315 87.6
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 5.9e-157 557.8 327 83.5
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 7.7e-157 557.4 339 81.4
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 1.7e-156 556.2 337 81.6
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 1.7e-156 556.2 335 79.7
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 2.2e-156 555.8 332 81.3
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 2.9e-156 555.4 339 79.9
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 5.5e-155 551.2 345 79.1
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 1.2e-154 550.1 339 80.8
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 2.7e-154 548.9 339 79.1
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 1.8e-153 546.2 332 80.7
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 3.0e-153 545.4 332 80.7
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 4.0e-153 545.0 332 80.7
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 9.7e-152 540.4 363 75.5
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 2.2e-151 539.3 339 78.2
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 8.2e-151 537.3 358 76.5
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 2.4e-150 535.8 322 80.7
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.6e-149 533.1 328 79.0
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.6e-149 533.1 339 78.2
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 5.9e-149 531.2 332 77.7
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 1.9e-147 526.2 394 69.5
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 2.5e-147 525.8 339 74.6
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 2.3e-145 519.2 339 75.8
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 1.4e-142 510.0 338 74.6
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 1.3e-140 503.4 339 74.6
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 1.7e-140 503.1 339 73.2
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 3.3e-139 498.8 339 75.2
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 2.6e-136 489.2 343 71.4
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 1.7e-135 486.5 322 73.3
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 2.8e-135 485.7 313 75.7
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 1.8e-129 466.5 310 73.9
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 7.8e-125 451.1 320 68.8
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 1.5e-120 436.8 334 68.0
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 1.6e-114 416.8 245 83.7
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 2.3e-113 412.9 339 64.3
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 3.4e-112 409.1 252 79.8
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 2.9e-111 406.0 239 83.7
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 1.1e-107 394.0 245 81.2
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.5e-107 393.7 249 79.1
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.4e-102 377.1 325 61.2
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 7.8e-101 371.3 208 88.0
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 2.1e-98 363.2 212 83.5
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 2.1e-98 363.2 231 76.2
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 6.2e-98 361.7 193 92.7
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 9.0e-97 357.8 220 80.0
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 6.4e-95 351.7 326 56.1
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 1.2e-88 330.9 195 82.6
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 5.4e-86 322.0 195 80.0
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 2.1e-85 320.1 322 53.7
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 3.4e-80 302.8 242 64.9
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 1.5e-75 287.3 195 69.2
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.6e-72 276.6 171 80.1
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.1e-62 244.6 135 90.4
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 1.2e-56 224.6 145 75.2
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 8.8e-52 208.4 155 65.8
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.1e-49 201.4 151 65.6
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 3.3e-43 179.9 148 66.2
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 2.1e-37 160.6 87 88.5
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.3e-36 157.1 102 73.5
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 3.1e-33 146.7 96 76.0
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 1.2e-32 144.8 101 76.2
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.5e-30 137.9 101 67.3
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 4.2e-30 136.3 74 87.8
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 2.1e-29 134.0 87 74.7
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 1.8e-28 131.0 78 78.2
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 7.2e-22 109.0 127 52.8
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 9.5e-22 108.6 88 59.1
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 1.2e-19 101.7 124 54.0
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.6e-19 100.5 77 63.6
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.3e-18 98.2 108 50.9
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 1.3e-18 98.2 319 26.6
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 6.3e-18 95.9 231 31.2
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 6.3e-18 95.9 105 50.5
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 1.8e-17 94.4 308 27.9
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 2.4e-17 94.0 281 31.7
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 1.5e-14 84.7 271 31.0
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 7.5e-11 72.4 103 44.7
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 9.8e-11 72.0 253 26.5
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 2.2e-10 70.9 53 69.8
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 3.5e-08 63.5 42 71.4


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