Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.1e-190 669.8 339 100.0
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 2.4e-190 668.7 339 99.7
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.8e-185 652.5 339 96.5
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 5.1e-185 651.0 338 96.4
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.6e-183 646.0 339 95.6
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 7.6e-181 637.1 339 94.1
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 3.3e-176 621.7 339 90.0
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 4.3e-176 621.3 339 89.4
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 9.7e-176 620.2 339 90.6
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 3.7e-175 618.2 339 90.3
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.8e-175 617.8 339 90.9
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 6.3e-175 617.5 335 90.4
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 6.3e-175 617.5 337 90.2
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 8.2e-175 617.1 339 90.0
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 1.1e-174 616.7 339 89.4
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 1.4e-174 616.3 339 90.3
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 1.4e-174 616.3 339 90.3
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 1.8e-174 615.9 339 89.7
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 2.4e-174 615.5 339 90.0
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.4e-174 615.5 334 90.7
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.4e-174 615.5 334 90.7
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.4e-174 615.5 334 90.7
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 2.4e-174 615.5 339 89.7
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 5.3e-174 614.4 339 89.1
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 6.9e-174 614.0 338 89.3
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 9.1e-174 613.6 334 90.4
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 2.6e-173 612.1 339 89.7
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 5.9e-173 610.9 339 89.7
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 5.9e-173 610.9 339 89.4
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 2.2e-172 609.0 339 89.7
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 2.9e-172 608.6 339 88.8
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 2.9e-172 608.6 339 88.8
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 5.0e-172 607.8 339 89.1
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 6.5e-172 607.4 339 88.8
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 6.5e-172 607.4 340 88.5
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 1.4e-171 606.3 334 89.2
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 1.4e-171 606.3 341 88.6
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 1.4e-171 606.3 338 88.8
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 2.5e-171 605.5 332 89.8
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 3.2e-171 605.1 341 88.3
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 3.2e-171 605.1 339 87.9
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 5.5e-171 604.4 339 88.8
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 5.5e-171 604.4 339 88.5
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 5.5e-171 604.4 332 89.5
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 5.5e-171 604.4 362 84.3
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 9.4e-171 603.6 342 87.4
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 1.2e-170 603.2 335 88.4
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 1.2e-170 603.2 335 88.4
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 2.1e-170 602.4 341 88.3
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 2.1e-170 602.4 376 81.4
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.7e-170 602.1 339 87.6
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.7e-170 602.1 339 87.6
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 2.7e-170 602.1 339 87.6
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 4.7e-170 601.3 339 87.3
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 1.4e-169 599.7 338 88.2
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 1.8e-169 599.4 339 87.3
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 2.3e-169 599.0 335 88.4
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 2.3e-169 599.0 339 87.3
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 2.3e-169 599.0 339 87.9
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 3.0e-169 598.6 328 89.9
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 3.0e-169 598.6 339 86.7
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 3.9e-169 598.2 339 87.6
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 6.7e-169 597.4 339 84.7
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 8.8e-169 597.0 341 88.0
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 8.8e-169 597.0 328 88.7
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 1.1e-168 596.7 338 88.2
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 2.0e-168 595.9 340 86.2
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 2.6e-168 595.5 342 86.5
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 7.4e-168 594.0 338 87.9
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 3.7e-167 591.7 339 83.8
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 6.3e-167 590.9 334 87.1
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 8.2e-167 590.5 339 85.5
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 1.1e-166 590.1 338 86.7
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 1.1e-166 590.1 342 86.0
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 1.1e-166 590.1 339 85.5
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 1.8e-166 589.3 338 86.7
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 2.4e-166 589.0 342 85.7
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 2.4e-166 589.0 341 87.1
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 5.3e-166 587.8 342 85.7
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 5.3e-166 587.8 338 87.0
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 9.1e-166 587.0 327 87.8
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 2.6e-165 585.5 339 85.0
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 4.5e-165 584.7 339 86.1
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 4.5e-165 584.7 328 87.8
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 1.7e-164 582.8 335 85.4
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 2.2e-164 582.4 315 91.4
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 3.8e-164 581.6 339 84.4
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 6.5e-164 580.9 339 84.4
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 8.5e-164 580.5 315 91.4
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 8.5e-164 580.5 339 84.1
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 1.4e-163 579.7 337 85.2
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 1.6e-162 576.2 339 83.5
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 8.0e-162 573.9 339 83.5
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 1.4e-161 573.2 339 82.9
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 2.0e-160 569.3 365 79.2
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 9.7e-160 567.0 345 81.4
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 2.8e-159 565.5 339 82.9
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 3.7e-159 565.1 334 84.1
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 1.2e-157 560.1 334 82.9
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 2.2e-156 555.8 394 73.4
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 2.9e-156 555.4 328 82.9
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 3.8e-156 555.1 345 79.4
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 3.8e-156 555.1 339 79.9
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 1.1e-155 553.5 357 79.3
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 1.4e-153 546.6 339 78.2
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 1.8e-153 546.2 322 81.1
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 3.7e-151 538.5 339 76.7
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 1.4e-150 536.6 339 81.4
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 2.2e-148 529.3 339 76.1
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 3.2e-147 525.4 335 75.2
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 3.6e-146 521.9 312 81.7
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 1.4e-145 520.0 339 74.3
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 9.8e-144 513.8 338 73.4
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 6.3e-143 511.1 343 73.2
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 4.7e-138 495.0 313 75.7
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 1.3e-135 486.9 335 71.6
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 7.8e-133 477.6 312 74.7
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 2.0e-125 453.0 339 70.8
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 1.2e-122 443.7 332 68.4
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 6.2e-122 441.4 320 66.2
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 2.9e-119 432.6 252 83.7
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 8.6e-116 421.0 245 84.5
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 4.3e-115 418.7 239 84.9
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 3.4e-112 409.1 249 80.7
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 9.9e-112 407.5 245 83.7
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.2e-109 400.6 327 64.5
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 1.6e-106 390.2 214 88.8
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 1.8e-105 386.7 220 86.4
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 1.3e-103 380.6 208 90.9
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 2.2e-103 379.8 231 80.1
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 6.4e-95 351.7 193 89.1
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 2.4e-94 349.7 326 56.1
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.3e-92 343.2 195 86.7
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 6.2e-90 335.1 200 80.0
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 1.8e-84 317.0 322 52.5
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 5.8e-80 302.0 242 63.2
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.9e-75 287.0 171 84.2
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 1.8e-73 280.4 195 67.7
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 5.9e-64 248.8 145 84.1
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 8.5e-63 245.0 135 90.4
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.6e-53 214.2 151 69.5
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 4.8e-50 202.6 155 63.2
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 5.5e-46 189.1 148 68.9
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 3.5e-40 169.9 102 81.4
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 1.3e-39 167.9 87 92.0
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 1.7e-34 151.0 82 86.6
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 1.4e-33 147.9 87 85.1
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 2.4e-33 147.1 101 77.2
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 5.3e-33 146.0 74 93.2
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 7.0e-33 145.6 104 68.3
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 2.9e-31 140.2 78 85.9
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 1.4e-25 121.3 88 67.0
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 7.7e-24 115.5 127 55.1
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.0e-23 115.2 108 58.3
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.5e-22 110.5 77 72.7
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 2.5e-22 110.5 124 57.3
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 8.3e-18 95.5 287 29.6
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 1.1e-17 95.1 74 63.5
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 1.8e-17 94.4 234 29.9
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 1.0e-15 88.6 319 25.4
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.7e-15 87.8 281 29.5
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 4.3e-14 83.2 268 30.6
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 9.8e-11 72.0 103 45.6
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 3.7e-10 70.1 53 67.9
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 1.6e-08 64.7 249 26.9
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.3e-07 61.6 45 66.7
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 1.7e-07 61.2 42 69.0


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