Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g080820.1 Solanum lycopersicum HOM05D000812 ORTHO05D000672 1.7e-91 339.3 176 100.0
Sopen01g030660 Solanum pennellii HOM05D000812 ORTHO05D000672 3.1e-69 265.4 144 94.4
Nitab4.5_0000059g0570 Nicotiana tabacum HOM05D000812 ORTHO05D000672 5.2e-32 141.7 147 57.1
Nitab4.5_0000700g0050 Nicotiana tabacum HOM05D000812 ORTHO05D000672 3.3e-26 122.5 129 56.6
CSS0018379 Camellia sinensis var. sinensis HOM05D000812 ORTHO05D000672 4.2e-13 79.0 104 47.1
Peaxi162Scf00017g03031 Petunia axillaris HOM05D000812 ORTHO05D000672 2.1e-12 76.6 130 42.3
CAN.G781.8 Capsicum annuum HOM05D000812 ORTHO05D000672 2.7e-12 76.3 129 40.3
vmacro19387 Vaccinium macrocarpon HOM05D000812 ORTHO05D000672 7.9e-12 74.7 118 36.4
Dinv20653 Davidia involucrata HOM05D000812 ORTHO05D000672 1.3e-11 73.9 127 36.2
Dinv02892 Davidia involucrata HOM05D000812 ORTHO05D000672 2.3e-11 73.2 113 40.7
Peaxi162Scf00255g01213 Petunia axillaris HOM05D000812 ORTHO05D000672 3.9e-11 72.4 142 38.0
vmacro19386 Vaccinium macrocarpon HOM05D000812 ORTHO05D000672 6.7e-11 71.6 102 39.2
Nitab4.5_0000646g0020 Nicotiana tabacum HOM05D000812 ORTHO05D000672 1.5e-10 70.5 144 36.1
MBI16_g27099_MAGBIO Magnolia biondii HOM05D000812 ORTHO05D000672 2.5e-10 69.7 70 48.6
Nitab4.5_0007719g0060 Nicotiana tabacum HOM05D000812 ORTHO05D000672 4.3e-10 68.9 140 35.0
Nitab4.5_0000025g0590 Nicotiana tabacum HOM05D000812 ORTHO05D000672 1.6e-09 67.0 115 37.4
PGSC0003DMG400024600 Solanum tuberosum HOM05D000812 ORTHO05D000672 3.7e-09 65.9 140 33.6
Actinidia19097 Actinidia chinensis HOM05D000812 ORTHO05D000672 6.2e-09 65.1 113 35.4
CSS0017926 Camellia sinensis var. sinensis HOM05D000812 ORTHO05D000672 6.2e-09 65.1 103 36.9
Lj9A449T43 Lonicera japonica HOM05D000812 ORTHO05D000672 6.2e-09 65.1 107 36.4
Nitab4.5_0001724g0060 Nicotiana tabacum HOM05D000812 ORTHO05D000672 6.2e-09 65.1 128 35.2
Lj5A124T71 Lonicera japonica HOM05D000812 ORTHO05D000672 8.1e-09 64.7 113 32.7
TAR374G0978 Trochodendron aralioides HOM05D000812 ORTHO05D000672 8.1e-09 64.7 92 39.1
Solyc03g114360.4 Solanum lycopersicum HOM05D000812 ORTHO05D000672 1.1e-08 64.3 140 33.6
Solyc05g005290.4 Solanum lycopersicum HOM05D000812 ORTHO05D000672 1.4e-08 63.9 78 42.3
RcHm_v2.0_Chr5g0030861 Rosa chinensis HOM05D000812 ORTHO05D000672 1.8e-08 63.5 77 40.3
PGSC0003DMG400013476 Solanum tuberosum HOM05D000812 ORTHO05D000672 2.4e-08 63.2 78 41.0
Sopen03g033460 Solanum pennellii HOM05D000812 ORTHO05D000672 3.1e-08 62.8 71 46.5
Rhsim08G0172100 Rhododendron simsii HOM05D000812 ORTHO05D000672 5.3e-08 62.0 119 33.6
Sopen05g001280 Solanum pennellii HOM05D000812 ORTHO05D000672 1.2e-07 60.8 81 40.7
PGSC0003DMG400013481 Solanum tuberosum HOM05D000812 ORTHO05D000672 1.2e-07 60.8 81 42.0
Solyc05g005280.4 Solanum lycopersicum HOM05D000812 ORTHO05D000672 1.5e-07 60.5 81 39.5
Peaxi162Scf00710g00414 Petunia axillaris HOM05D000812 ORTHO05D000672 2.0e-07 60.1 72 41.7
Thecc.03G012700 Theobroma cacao HOM05D000812 ORTHO05D000672 2.0e-07 60.1 136 30.1
Nn3g16865 Nelumbo nucifera HOM05D000812 ORTHO05D000672 2.6e-07 59.7 108 33.3
Nitab4.5_0003546g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.6e-07 59.7 59 59.3
Hma1.2p1_0160F.1_g070920 Hydrangea macrophylla HOM05D000812 ORTHO05D000672 3.4e-07 59.3 103 35.0
MSTRG.4372 Avicennia marina HOM05D000812 ORTHO05D000672 4.5e-07 58.9 105 41.0
Nitab4.5_0000203g0240 Nicotiana tabacum HOM05D000812 ORTHO05D000672 4.5e-07 58.9 70 41.4
Nitab4.5_0001483g0030 Nicotiana tabacum HOM05D000812 ORTHO05D000672 4.5e-07 58.9 70 41.4
Oeu057350.1 Olea europaea HOM05D000812 ORTHO05D000672 4.5e-07 58.9 96 37.5
Potri.015G076500 Populus trichocarpa HOM05D000812 ORTHO05D000672 4.5e-07 58.9 132 31.1
QL08p058954 Quercus lobata HOM05D000812 ORTHO05D000672 4.5e-07 58.9 89 31.5
TAR622G1404 Trochodendron aralioides HOM05D000812 ORTHO05D000672 4.5e-07 58.9 71 42.3
Potri.012G081100 Populus trichocarpa HOM05D000812 ORTHO05D000672 5.8e-07 58.5 139 29.5
TAR629G2674 Trochodendron aralioides HOM05D000812 ORTHO05D000672 5.8e-07 58.5 71 45.1
FAN21G3672 Fragaria x ananassa HOM05D000812 ORTHO05D000672 7.6e-07 58.2 138 27.5
Sabra15G0101600 Salix brachista HOM05D000812 ORTHO05D000672 7.6e-07 58.2 131 29.8
Haze_07472 Corylus avellana HOM05D000812 ORTHO05D000672 9.9e-07 57.8 113 31.9
Peaxi162Scf00048g00193 Petunia axillaris HOM05D000812 ORTHO05D000672 9.9e-07 57.8 85 45.9
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 1.3e-06 57.4 101 32.7
FAN16G2278 Fragaria x ananassa HOM05D000812 ORTHO05D000672 1.7e-06 57.0 104 30.8
Hma1.2p1_0536F.1_g173990 Hydrangea macrophylla HOM05D000812 ORTHO05D000672 1.7e-06 57.0 83 38.6
Sed0012184 Sechium edule HOM05D000812 ORTHO05D000672 1.7e-06 57.0 107 30.8
Cc04_g14100 Coffea canephora HOM05D000812 ORTHO05D000672 2.2e-06 56.6 144 28.5
MD13G1092800 Malus domestica HOM05D000812 ORTHO05D000672 2.9e-06 56.2 86 32.6
Actinidia33069 Actinidia chinensis HOM05D000812 ORTHO05D000672 3.8e-06 55.8 73 38.4
ATR0730G191 Amborella trichopoda HOM05D000812 ORTHO05D000672 3.8e-06 55.8 103 31.1
CDE06G0480 Ceratophyllum demersum HOM05D000812 ORTHO05D000672 3.8e-06 55.8 143 29.4
Dinv24842 Davidia involucrata HOM05D000812 ORTHO05D002628 3.8e-06 55.8 70 38.6
SalBow2G2821 Salvia bowleyana HOM05D000812 ORTHO05D000672 3.8e-06 55.8 71 43.7
Atru.chr11.2039 Acer truncatum HOM05D000812 ORTHO05D000672 4.9e-06 55.5 71 40.8
Cfa019133 Carpinus fangiana HOM05D000812 ORTHO05D000672 4.9e-06 55.5 115 28.7
Ca_17858_v3 Cicer arietinum L. HOM05D000812 ORTHO05D000672 6.4e-06 55.1 71 36.6
Ciclev10032827m.g Citrus clementina HOM05D000812 ORTHO05D000672 6.4e-06 55.1 70 35.7
Sc12g0005320 Simmondsia chinensis HOM05D000812 ORTHO05D000672 6.4e-06 55.1 143 27.3
Migut.D01931 Erythranthe guttata HOM05D000812 ORTHO05D000672 8.4e-06 54.7 109 33.9
FAN11G3004 Fragaria x ananassa HOM05D000812 ORTHO05D000672 8.4e-06 54.7 104 29.8
RcHm_v2.0_Chr3g0452151 Rosa chinensis HOM05D000812 ORTHO05D000672 8.4e-06 54.7 102 31.4


User provided reference genes

Program Settings