Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g066616.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 6.4e-67 257.3 132 100.0
Solyc05g017797.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 7.8e-65 250.4 132 98.5
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 2.9e-59 231.9 132 88.6
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.9e-51 204.5 132 78.0
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.4e-50 202.2 132 78.8
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.1e-49 199.1 132 74.2
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.7e-49 198.7 132 74.2
PGSC0003DMG400033169 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.1e-46 189.1 132 72.7
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.8e-43 178.3 117 75.2
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 3.9e-40 168.3 132 72.7
Solyc09g015140.2 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.4e-37 159.8 84 96.4
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 6.5e-35 151.0 87 92.0
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.7e-31 137.1 129 55.8
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.3e-30 134.4 90 78.9
CAN.G352.58 Capsicum annuum HOM05D002261 ORTHO05D002334 1.2e-28 130.2 136 52.2
CAN.G352.57 Capsicum annuum HOM05D002261 ORTHO05D002334 1.0e-27 127.1 137 50.4
PGSC0003DMG400041066 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.2e-26 122.1 107 58.9
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.4e-23 111.7 79 74.7
Sopen12g016550 Solanum pennellii HOM05D002261 ORTHO05D002334 3.4e-20 102.1 78 71.8
Sopen10g020420 Solanum pennellii HOM05D002261 ORTHO05D002334 3.9e-16 88.6 58 81.0
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-15 87.0 131 39.7
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 2.0e-15 86.3 131 39.7
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-14 83.2 136 33.8
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.7e-14 83.2 42 95.2
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.8e-14 82.4 129 38.8
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.2e-14 80.9 130 36.2
Solyc12g042110.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.4e-13 80.1 98 46.9
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 4.1e-13 78.6 99 49.5
Nitab4.5_0012917g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 9.1e-13 77.4 116 35.3
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 1.6e-12 76.6 34 100.0
Sopen03g024550 Solanum pennellii HOM05D002261 ORTHO05D002334 4.5e-12 75.1 52 73.1
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.7e-12 74.3 128 38.3
Nitab4.5_0011868g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-11 72.8 126 34.9
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-11 72.8 116 41.4
Nitab4.5_0002141g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.9e-11 72.4 111 38.7
Nitab4.5_0003349g0050 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.8e-11 72.0 136 37.5
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.0e-11 71.6 44 70.5
Nitab4.5_0000250g0180 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.1e-10 70.5 71 52.1
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 1.1e-10 70.5 109 39.4
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 4.2e-10 68.6 117 34.2
PGSC0003DMG401008657 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.6e-09 66.6 131 34.4
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 2.1e-09 66.2 48 62.5
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 2.7e-09 65.9 131 36.6
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-08 62.8 130 36.2
Nitab4.5_0000570g0170 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.0e-08 62.4 118 36.4
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.0e-08 62.4 110 33.6
Sopen06g019020 Solanum pennellii HOM05D002261 ORTHO05D002334 2.0e-07 59.7 120 32.5
PGSC0003DMG400030801 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.6e-07 59.3 36 75.0
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 7.5e-07 57.8 130 33.1
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.7e-06 56.6 133 28.6
Nitab4.5_0000600g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-06 56.2 119 31.9
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 3.7e-06 55.5 130 33.1
PGSC0003DMG400033635 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.8e-06 55.1 36 72.2


User provided reference genes

Program Settings