Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g057740.3 Solanum lycopersicum HOM05D024491 ORTHO05D000022 3.2e-107 391.7 192 100.0
Sopen01g022990 Solanum pennellii HOM05D024491 ORTHO05D000022 6.9e-78 294.3 147 95.9
Peaxi162Scf00079g00195 Petunia axillaris HOM05D000155 ORTHO05D000022 9.1e-22 107.8 124 41.9
CAN.G2020.2 Capsicum annuum HOM05D024491 ORTHO05D000022 7.7e-21 104.8 85 51.8
CAN.G1086.3 Capsicum annuum HOM05D024491 ORTHO05D000022 9.5e-19 97.8 93 46.2
PGSC0003DMG400014751 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.0e-17 92.4 134 32.8
Nitab4.5_0002045g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-16 89.4 128 35.2
Nitab4.5_0009185g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-15 85.5 130 33.8
Nitab4.5_0005104g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.1e-14 82.8 144 29.9
Nitab4.5_0000254g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-13 80.1 95 38.9
Nitab4.5_0003475g0050 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.0e-13 80.1 127 32.3
Peaxi162Scf01149g10016 Petunia axillaris HOM05D000155 ORTHO05D000022 5.9e-13 78.6 119 36.1
Nitab4.5_0000206g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-12 77.0 130 31.5
Nitab4.5_0000335g0250 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-12 76.6 113 31.9
Nitab4.5_0002956g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.0e-12 75.5 112 34.8
Peaxi162Scf00002g00074 Petunia axillaris HOM05D000155 ORTHO05D000022 5.0e-12 75.5 129 30.2
CAN.G1598.9 Capsicum annuum HOM05D000155 ORTHO05D000022 8.6e-12 74.7 99 34.3
Peaxi162Scf00160g01638 Petunia axillaris HOM05D000155 ORTHO05D000022 8.6e-12 74.7 132 27.3
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.5e-11 73.9 129 31.0
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 1.9e-11 73.6 122 34.4
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-11 73.6 123 34.1
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.5e-11 73.2 138 29.0
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-11 72.8 86 39.5
Peaxi162Scf00700g00035 Petunia axillaris HOM05D000155 ORTHO05D000022 3.3e-11 72.8 129 29.5
Peaxi162Scf00700g00339 Petunia axillaris HOM05D000273 ORTHO05D000022 3.3e-11 72.8 129 29.5
Sopen05g018930 Solanum pennellii HOM05D000155 ORTHO05D000022 3.3e-11 72.8 117 29.9
PGSC0003DMG400013767 Solanum tuberosum HOM05D000155 ORTHO05D000022 3.3e-11 72.8 90 35.6
Peaxi162Scf00138g01512 Petunia axillaris HOM05D000155 ORTHO05D000022 5.6e-11 72.0 131 29.0
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 5.6e-11 72.0 123 35.0
Nitab4.5_0000613g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.3e-11 71.6 101 35.6
Nitab4.5_0002922g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.3e-11 71.6 112 34.8
Nitab4.5_0003347g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-10 70.9 94 36.2
Nitab4.5_0004637g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-10 70.9 112 31.2
Nitab4.5_0008823g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.6e-10 70.5 108 32.4
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 2.1e-10 70.1 123 31.7
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 3.6e-10 69.3 118 32.2
Sopen02g002350 Solanum pennellii HOM05D000014 ORTHO05D000016 3.6e-10 69.3 123 31.7
CAN.G883.22 Capsicum annuum HOM05D000155 ORTHO05D000022 4.7e-10 68.9 81 33.3
Peaxi162Scf00024g02013 Petunia axillaris HOM05D000155 ORTHO05D000022 4.7e-10 68.9 130 29.2
Peaxi162Scf00477g00022 Petunia axillaris HOM05D000155 ORTHO05D000022 4.7e-10 68.9 109 34.9
Sopen08g020500 Solanum pennellii HOM05D000155 ORTHO05D000022 4.7e-10 68.9 123 31.7
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 6.1e-10 68.6 134 26.9
Sopen06g003730 Solanum pennellii HOM05D000155 ORTHO05D000022 8.0e-10 68.2 123 32.5
Nitab4.5_0000654g0140 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.8e-09 67.0 129 32.6
PGSC0003DMG400027758 Solanum tuberosum HOM05D001426 ORTHO05D001389 3.1e-09 66.2 132 28.0
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.9e-09 64.7 106 31.1
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.9e-09 64.7 132 27.3
Nitab4.5_0000274g0280 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-08 64.3 133 24.1
Nitab4.5_0004015g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.2e-08 64.3 131 27.5
Nitab4.5_0001348g0150 Nicotiana tabacum HOM05D014464 ORTHO05D000022 1.5e-08 63.9 85 35.3
Peaxi162Scf00108g00112 Petunia axillaris HOM05D000155 ORTHO05D000022 1.5e-08 63.9 108 31.5
Nitab4.5_0000358g0080 Nicotiana tabacum HOM05D004990 ORTHO05D000022 2.6e-08 63.2 80 38.8
Nitab4.5_0005413g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.6e-08 63.2 70 44.3
Nitab4.5_0000650g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.4e-08 62.8 116 28.4
Sopen03g011360 Solanum pennellii HOM05D000155 ORTHO05D000022 3.4e-08 62.8 137 29.9
CANSAT01G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-08 62.4 138 28.3
Sopen01g005170 Solanum pennellii HOM05D000155 ORTHO05D000022 4.4e-08 62.4 130 26.2
CAN.G389.8 Capsicum annuum HOM05D064608 ORTHO05D000022 5.8e-08 62.0 71 42.3
Sc05g0008160 Simmondsia chinensis HOM05D000155 ORTHO05D000022 5.8e-08 62.0 119 31.1
Peaxi162Scf00188g00934 Petunia axillaris HOM05D000155 ORTHO05D000022 7.5e-08 61.6 150 28.0
Nitab4.5_0001567g0130 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.8e-08 61.2 138 26.1
Sopen11g008120 Solanum pennellii HOM05D000014 ORTHO05D000016 9.8e-08 61.2 139 29.5
PGSC0003DMG400041332 Solanum tuberosum HOM05D000155 ORTHO05D000022 9.8e-08 61.2 91 34.1
Peaxi162Scf01147g00005 Petunia axillaris HOM05D000155 ORTHO05D000022 1.3e-07 60.8 109 30.3
PGSC0003DMG400001171 Solanum tuberosum HOM05D024491 ORTHO05D000022 1.3e-07 60.8 117 33.3
Nitab4.5_0000682g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-07 60.5 109 28.4
Nitab4.5_0001856g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-07 60.5 133 24.8
Nitab4.5_0000321g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-07 60.1 109 28.4
Nitab4.5_0000639g0110 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.2e-07 60.1 108 29.6
Sopen12g016250 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-07 60.1 123 28.5
Sopen02g028750 Solanum pennellii HOM05D000155 ORTHO05D000022 2.9e-07 59.7 105 27.6
Nitab4.5_0000213g0180 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-07 59.3 90 35.6
Nitab4.5_0000469g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-07 59.3 91 29.7
Nitab4.5_0007262g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.7e-07 59.3 89 37.1
Sopen07g021380 Solanum pennellii HOM05D000155 ORTHO05D000034 3.7e-07 59.3 130 24.6
Nitab4.5_0000036g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-07 58.9 178 23.6
Nitab4.5_0000188g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-07 58.9 104 31.7
Nitab4.5_0000384g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.9e-07 58.9 101 32.7
PGSC0003DMG400010457 Solanum tuberosum HOM05D000155 ORTHO05D000022 4.9e-07 58.9 94 34.0
Nitab4.5_0004409g0020 Nicotiana tabacum HOM05D001426 ORTHO05D001389 6.4e-07 58.5 138 26.1
Cc11_g02100 Coffea canephora HOM05D000003 ORTHO05D000022 8.3e-07 58.2 111 28.8
Sopen08g017350 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-06 57.8 105 32.4
Nitab4.5_0006480g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-06 57.4 77 33.8
MBI01_g40633_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-06 57.0 97 34.0
Nitab4.5_0001181g0100 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.9e-06 57.0 93 34.4
VMungo1080G0380 Vigna mungo HOM05D000155 ORTHO05D000022 1.9e-06 57.0 123 29.3
Nitab4.5_0000258g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-06 56.6 111 27.9
Nitab4.5_0002646g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.4e-06 56.6 96 33.3
Peaxi162Scf01249g00027 Petunia axillaris HOM05D000155 ORTHO05D000022 2.4e-06 56.6 104 30.8
MBI04_g26264_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.2e-06 56.2 105 30.5
Nitab4.5_0000769g0160 Nicotiana tabacum HOM05D000155 ORTHO05D000022 3.2e-06 56.2 111 28.8
PSO339G1836 Papaver somniferum HOM05D003407 ORTHO05D001026 3.2e-06 56.2 114 31.6
PGSC0003DMG400029909 Solanum tuberosum HOM05D000024 ORTHO05D000022 3.2e-06 56.2 93 31.2
AUR62027637 Chenopodium quinoa HOM05D003315 ORTHO05D010168 4.1e-06 55.8 102 29.4
MBI13_g30485_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.1e-06 55.8 99 33.3
Nitab4.5_0000799g0060 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.1e-06 55.8 104 29.8
Nitab4.5_0003349g0070 Nicotiana tabacum HOM05D000155 ORTHO05D000022 4.1e-06 55.8 101 32.7
CANSAT11G0329 Cannabis sativa HOM05D000003 ORTHO05D000004 5.4e-06 55.5 90 30.0
Sopen03g011810 Solanum pennellii HOM05D000004 ORTHO05D000034 5.4e-06 55.5 97 36.1
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 5.4e-06 55.5 85 35.3
Aqoxy1G03921 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 7.0e-06 55.1 101 31.7
Nitab4.5_0001141g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.0e-06 55.1 108 28.7
Sopen01g016010 Solanum pennellii HOM05D000003 ORTHO05D000022 7.0e-06 55.1 94 31.9
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 7.0e-06 55.1 99 28.3
A01p12730 Brassica napus HOM05D000155 ORTHO05D000022 9.2e-06 54.7 90 34.4
BraA01t01216Z Brassica rapa HOM05D000155 ORTHO05D000022 9.2e-06 54.7 90 34.4
Nitab4.5_0001027g0210 Nicotiana tabacum HOM05D000155 ORTHO05D000022 9.2e-06 54.7 70 37.1
QL05p080949 Quercus lobata HOM05D000155 ORTHO05D000022 9.2e-06 54.7 101 31.7
PGSC0003DMG400014983 Solanum tuberosum HOM05D000155 ORTHO05D000022 9.2e-06 54.7 79 32.9


User provided reference genes

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