Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g020520.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 2.5e-253 878.2 432 100.0
Sopen01g015960 Solanum pennellii HOM05D006967 ORTHO05D008692 9.3e-216 753.4 388 96.1
Sopen01g019010 Solanum pennellii HOM05D006967 ORTHO05D008692 2.3e-214 748.8 397 93.5
Solyc01g049910.4 Solanum lycopersicum HOM05D006967 ORTHO05D008692 5.5e-208 727.6 391 92.8
CAN.G40.7 Capsicum annuum HOM05D006967 ORTHO05D008692 1.3e-185 653.3 391 81.6
Peaxi162Scf00715g00310 Petunia axillaris HOM05D006967 ORTHO05D008692 1.7e-172 609.8 402 75.6
PGSC0003DMG402016926 Solanum tuberosum HOM05D006967 ORTHO05D008692 1.0e-158 563.9 301 90.7
Nitab4.5_0000217g0010 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.6e-151 540.0 338 78.1
Nitab4.5_0001253g0030 Nicotiana tabacum HOM05D006967 ORTHO05D008692 1.3e-132 477.2 305 75.7
Haze_05177 Corylus avellana HOM05D006967 ORTHO05D008692 2.1e-111 406.8 393 51.7
CSS0034338 Camellia sinensis var. sinensis HOM05D006967 ORTHO05D008692 3.2e-107 392.9 386 52.1
DCAR_004368 Daucus carota HOM05D006967 ORTHO05D008692 5.5e-107 392.1 375 53.1
CiPaw.09G141400 Carya illinoinensis HOM05D006967 ORTHO05D008692 7.4e-104 381.7 392 50.5
Cc09_g04480 Coffea canephora HOM05D006967 ORTHO05D008692 1.1e-102 377.9 391 51.4
Thecc.05G313500 Theobroma cacao HOM05D006967 ORTHO05D008692 5.3e-102 375.6 391 49.9
Potri.003G157800 Populus trichocarpa HOM05D006967 ORTHO05D008692 2.0e-101 373.6 398 49.5
Prupe.4G123400 Prunus persica HOM05D006967 ORTHO05D008692 1.7e-100 370.5 401 50.1
Manes.18G124500 Manihot esculenta HOM05D006967 ORTHO05D008692 2.2e-100 370.2 393 49.6
MBI10_g30431_MAGBIO Magnolia biondii HOM05D006967 ORTHO05D008692 8.4e-100 368.2 397 51.1
Oeu008739.3 Olea europaea HOM05D006967 ORTHO05D008692 1.2e-98 364.4 394 48.7
Nn7g38428 Nelumbo nucifera HOM05D006967 ORTHO05D008692 1.0e-97 361.3 393 47.8
RcHm_v2.0_Chr5g0022471 Rosa chinensis HOM05D006967 ORTHO05D008692 3.9e-97 359.4 386 48.7
FAN11G3906 Fragaria x ananassa HOM05D006967 ORTHO05D008692 1.1e-96 357.8 395 48.6
TPR.G19829 Trifolium pratense HOM05D006967 ORTHO05D008692 1.9e-96 357.1 383 49.1
FvH4_3g13520 Fragaria vesca HOM05D006967 ORTHO05D008692 2.5e-96 356.7 386 49.0
Lj2A340G21 Lonicera japonica HOM05D006967 ORTHO05D008692 3.3e-96 356.3 344 54.1
MD10G1221200 Malus domestica HOM05D006967 ORTHO05D008692 5.7e-96 355.5 385 48.3
Aqoxy1G01340 Aquilegia oxysepala HOM05D006967 ORTHO05D008692 7.4e-96 355.1 395 47.6
Medtr8g070630 Medicago truncatula HOM05D006967 ORTHO05D008692 3.7e-95 352.8 383 48.3
THA.LOC104806234 Tarenaya hassleriana HOM05D006967 ORTHO05D008692 1.1e-94 351.3 387 49.4
Lalb_Chr09g0334571 Lupinus albus HOM05D006967 ORTHO05D008692 4.1e-94 349.4 387 49.1
Aa31LG6G2720 Aethionema arabicum HOM05D006967 ORTHO05D008692 5.3e-94 349.0 392 44.9
Gorai.013G126100 Gossypium raimondii HOM05D006967 ORTHO05D008692 6.9e-94 348.6 394 47.0
Glyma.16G096000 Glycine max HOM05D006967 ORTHO05D008692 1.5e-93 347.4 383 47.3
FAN25G2282 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.0e-93 347.1 386 47.9
FAN21G4071 Fragaria x ananassa HOM05D006967 ORTHO05D008692 3.4e-93 346.3 398 46.5
CANSAT35G1213 Cannabis sativa HOM05D006967 ORTHO05D008692 7.7e-93 345.1 392 45.2
arahy.Tifrunner.gnm1.ann1.B3JMJ8 Arachis hypogaea HOM05D006967 ORTHO05D008692 1.0e-92 344.7 412 46.1
TWI63G0275 Tripterygium wilfordii HOM05D006967 ORTHO05D008692 2.2e-92 343.6 393 46.1
Lj4g0002657 Lotus japonicus HOM05D006967 ORTHO05D008692 2.9e-92 343.2 384 47.4
Gohir.D13G112300 Gossypium hirsutum HOM05D006967 ORTHO05D008692 3.8e-92 342.8 392 47.2
vmacro03578 Vaccinium macrocarpon HOM05D006967 ORTHO05D008692 6.5e-92 342.0 454 44.3
BraA01t01143Z Brassica rapa HOM05D006967 ORTHO05D008692 1.4e-91 340.9 399 47.1
AUR62032339 Chenopodium quinoa HOM05D006967 ORTHO05D008692 1.4e-91 340.9 389 46.5
PSO675G8399 Papaver somniferum HOM05D006967 ORTHO05D008692 1.4e-91 340.9 395 44.6
Rhsim13G0136900 Rhododendron simsii HOM05D006967 ORTHO05D008692 3.2e-91 339.7 345 50.7
Phvul.003G274600 Phaseolus vulgaris HOM05D006967 ORTHO05D008692 4.2e-91 339.3 393 46.1
Eucgr.E04333 Eucalyptus grandis HOM05D006967 ORTHO05D008692 7.2e-91 338.6 393 45.0
QL11p010599 Quercus lobata HOM05D006967 ORTHO05D008692 7.2e-91 338.6 352 49.4
A01p12010 Brassica napus HOM05D006967 ORTHO05D008692 1.2e-90 337.8 399 46.4
MSTRG.24877 Avicennia marina HOM05D006967 ORTHO05D008692 1.6e-90 337.4 397 46.3
Gohir.A13G109700 Gossypium hirsutum HOM05D006967 ORTHO05D008692 2.7e-90 336.7 393 46.1
PSO541G0117 Papaver somniferum HOM05D006967 ORTHO05D008692 4.6e-90 335.9 395 44.3
Sp7g18650 Schrenkiella parvula HOM05D006967 ORTHO05D008692 7.9e-90 335.1 391 46.0
BolC1t01391H Brassica oleracea HOM05D006967 ORTHO05D008692 2.3e-89 333.6 393 45.8
BcaC09g51322 Brassica carinata HOM05D006967 ORTHO05D008692 5.1e-89 332.4 393 45.8
C01p14260 Brassica napus HOM05D006967 ORTHO05D008692 8.8e-89 331.6 393 45.8
EL10Ac5g10560 Beta vulgaris HOM05D006967 ORTHO05D008692 4.3e-88 329.3 422 43.1
BcaNung03720 Brassica carinata HOM05D006967 ORTHO05D008692 7.4e-88 328.6 394 45.9
AL7G33600 Arabidopsis lyrata HOM05D006967 ORTHO05D008692 1.3e-87 327.8 392 45.9
BcaNung03721 Brassica carinata HOM05D006967 ORTHO05D008692 3.7e-87 326.2 394 45.9
AT4G20310 Arabidopsis thaliana HOM05D006967 ORTHO05D008692 6.3e-87 325.5 380 46.6
Duzib177G0925 Durio zibethinus HOM05D006967 ORTHO05D008692 6.3e-87 325.5 392 45.4
Carub.0007s2087 Capsella rubella HOM05D006967 ORTHO05D008692 1.1e-86 324.7 392 45.9
Thhalv10024898m.g Eutrema salsugineum HOM05D006967 ORTHO05D008692 6.9e-86 322.0 392 44.9
Migut.G00899 Erythranthe guttata HOM05D006967 ORTHO05D008692 1.5e-85 320.9 396 47.0
Migut.K01517 Erythranthe guttata HOM05D006967 ORTHO05D008692 4.5e-85 319.3 396 46.2
ECA238G0649 Erigeron canadensis HOM05D006967 ORTHO05D008692 2.2e-84 317.0 385 45.7
Migut.M02039 Erythranthe guttata HOM05D006967 ORTHO05D008692 2.2e-84 317.0 396 46.2
AUR62028614 Chenopodium quinoa HOM05D006967 ORTHO05D008692 9.4e-83 311.6 438 40.6
FAN16G1037 Fragaria x ananassa HOM05D006967 ORTHO05D008692 2.1e-82 310.5 342 47.7
arahy.Tifrunner.gnm1.ann1.IV6A0X Arachis hypogaea HOM05D006967 ORTHO05D008692 7.9e-82 308.5 393 42.5
arahy.Tifrunner.gnm1.ann1.S5Z5QJ Arachis hypogaea HOM05D006967 ORTHO05D008692 7.9e-82 308.5 393 42.5
Sed0023777 Sechium edule HOM05D006967 ORTHO05D008692 1.8e-81 307.4 393 41.2
CAN.G40.9 Capsicum annuum HOM05D006967 ORTHO05D008692 6.7e-81 305.4 210 74.3
HanXRQChr14g0439851 Helianthus annuus HOM05D006967 ORTHO05D008692 1.5e-80 304.3 387 43.9
MELO3C005917.2 Cucumis melo HOM05D006967 ORTHO05D008692 7.4e-80 302.0 391 40.9
CsaV3_5G000140 Cucumis sativus L. HOM05D006967 ORTHO05D008692 1.8e-78 297.4 390 40.3
CARHR227130 Cardamine hirsuta HOM05D006967 ORTHO05D008692 2.0e-77 293.9 391 42.2
Hund09497 Selenicereus undatus HOM05D006967 ORTHO05D008692 2.0e-77 293.9 397 42.6
Sabra03G0114400 Salix brachista HOM05D006967 ORTHO05D008692 5.0e-76 289.3 357 45.9
ATR0737G179 Amborella trichopoda HOM05D006967 ORTHO05D008692 1.2e-74 284.6 399 41.1
SHI28117 Sapria himalayana HOM05D006967 ORTHO05D008692 1.6e-74 284.3 391 39.9
HPP92_009939 Vanilla planifolia HOM05D006967 ORTHO05D008692 2.3e-73 280.4 398 41.2
VMungo0251G0412 Vigna mungo HOM05D006967 ORTHO05D008692 2.6e-72 276.9 358 43.6
SEGI_11534 Sequoiadendron giganteum HOM05D006967 ORTHO05D008692 7.4e-72 275.4 405 38.5
ClCG01G000040 Citrullus lanatus HOM05D006967 ORTHO05D008692 6.3e-71 272.3 343 42.9
Dinv05283 Davidia involucrata HOM05D006967 ORTHO05D008692 1.7e-68 264.2 273 47.6
SGA_v2.0_scaffold62G21391 Striga asiatica HOM05D006967 ORTHO05D008692 5.0e-68 262.7 399 41.1
Cpa.g.sc30.57 Carica papaya HOM05D006967 ORTHO05D008692 3.2e-67 260.0 347 41.8
COL.COLO4_10527 Corchorus olitorius HOM05D001999 ORTHO05D001994 1.2e-64 251.5 302 45.0
TAR624G1073 Trochodendron aralioides HOM05D006967 ORTHO05D008692 8.3e-63 245.4 278 46.8
Ciclev10015668m.g Citrus clementina HOM05D006967 ORTHO05D008692 5.4e-54 216.1 231 46.3
Psat4g112640 Pisum sativum HOM05D006967 ORTHO05D008692 2.5e-51 207.2 221 47.5
Sc05g0001460 Simmondsia chinensis HOM05D006967 ORTHO05D008692 1.4e-49 201.4 243 44.9
Ah.11g050600 Amaranthus hybridus HOM05D006967 ORTHO05D008692 5.7e-48 196.1 237 44.3
Os01g0654200 Oryza sativa ssp. japonica HOM05D006967 ORTHO05D008692 2.2e-47 194.1 353 35.1
AagrBONN_evm.TU.Sc2ySwM_368.2736 Anthoceros agrestis HOM05D006967 ORTHO05D008692 3.4e-40 170.2 388 32.2
Ca_22538_v3 Cicer arietinum L. HOM05D006967 ORTHO05D008692 1.7e-39 167.9 285 36.8
Zm00001eb158090 Zea mays HOM05D006967 ORTHO05D008692 9.2e-38 162.2 280 34.3
Potri.001G073200 Populus trichocarpa HOM05D006967 ORTHO05D008692 2.2e-31 141.0 227 37.4
TAR624G0936 Trochodendron aralioides HOM05D006967 ORTHO05D008692 3.6e-26 123.6 80 73.8
SMO176G0004 Selaginella moellendorffii HOM05D006967 ORTHO05D008692 8.1e-26 122.5 376 27.9
HPP92_007230 Vanilla planifolia HOM05D006967 ORTHO05D008692 1.8e-17 94.7 190 37.4
CBR_g19989 Chara braunii HOM05D006967 ORTHO05D008692 2.4e-14 84.3 108 39.8
CBR_g19993 Chara braunii HOM05D006967 ORTHO05D008692 1.7e-12 78.2 102 38.2
Nitab4.5_0001253g0040 Nicotiana tabacum HOM05D006967 ORTHO05D008692 2.3e-12 77.8 94 50.0
HPP92_007178 Vanilla planifolia HOM05D006967 ORTHO05D008692 5.4e-06 56.6 97 37.1


User provided reference genes

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