Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g016660.1 Solanum lycopersicum HOM05D000513 ORTHO05D017819 6.2e-27 123.2 57 100.0
Sopen08g013170 Solanum pennellii HOM05D000513 ORTHO05D017819 7.1e-23 109.8 56 89.3
Solyc01g056650.1 Solanum lycopersicum HOM05D000513 ORTHO05D017819 5.9e-17 90.1 58 74.1
Sopen08g014550 Solanum pennellii HOM05D000513 ORTHO05D017819 3.8e-16 87.4 56 73.2
Solyc10g045450.1 Solanum lycopersicum HOM05D000513 ORTHO05D017819 3.2e-15 84.3 54 75.9
Solyc11g039760.1 Solanum lycopersicum HOM05D000513 ORTHO05D017819 5.7e-12 73.6 56 67.9
TPR.G8813 Trifolium pratense HOM05D000513 ORTHO05D005338 9.1e-10 66.2 90 45.6
Solyc02g088000.3 Solanum lycopersicum HOM05D000513 ORTHO05D005338 1.5e-09 65.5 126 36.5
Sopen02g032740 Solanum pennellii HOM05D000513 ORTHO05D005338 1.5e-09 65.5 126 36.5
PGSC0003DMG400001328 Solanum tuberosum HOM05D000513 ORTHO05D005338 1.5e-09 65.5 126 36.5
CAN.G206.155 Capsicum annuum HOM05D000513 ORTHO05D005338 3.8e-08 60.8 125 33.6
Nitab4.5_0000564g0020 Nicotiana tabacum HOM05D000513 ORTHO05D005338 3.8e-08 60.8 126 34.9
RcHm_v2.0_Chr2g0168331 Rosa chinensis HOM05D000513 ORTHO05D005338 1.4e-07 58.9 126 33.3
Nn1g04753 Nelumbo nucifera HOM05D000513 ORTHO05D005338 3.2e-07 57.8 54 57.4
Nitab4.5_0002980g0050 Nicotiana tabacum HOM05D000513 ORTHO05D005338 4.2e-07 57.4 126 33.3
Oeu027855.1 Olea europaea HOM05D000513 ORTHO05D005338 5.5e-07 57.0 126 33.3
Oeu027856.1 Olea europaea HOM05D000513 ORTHO05D005338 5.5e-07 57.0 126 33.3
MELO3C009861.2 Cucumis melo HOM05D000513 ORTHO05D005338 7.2e-07 56.6 125 32.8
ECA232G4228 Erigeron canadensis HOM05D000513 ORTHO05D005338 9.4e-07 56.2 125 33.6
HanXRQChr09g0265221 Helianthus annuus HOM05D000513 ORTHO05D005338 9.4e-07 56.2 125 33.6
arahy.Tifrunner.gnm1.ann1.UUZ1A7 Arachis hypogaea HOM05D000513 ORTHO05D005338 1.2e-06 55.8 125 32.0
Ciclev10011124m.g Citrus clementina HOM05D000513 ORTHO05D005338 1.2e-06 55.8 125 33.6
Actinidia38766 Actinidia chinensis HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.8
Actinidia38784 Actinidia chinensis HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.8
FvH4_6g48410 Fragaria vesca HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.0
FAN02G2319 Fragaria x ananassa HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.0
FAN09G0920 Fragaria x ananassa HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.0
FAN14G5629 Fragaria x ananassa HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.0
PGR004G2567 Punica granatum HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.8
GSVIVG01011429001 Vitis vinifera HOM05D000513 ORTHO05D005338 1.6e-06 55.5 125 32.8
MSTRG.3241 Avicennia marina HOM05D000513 ORTHO05D005338 2.1e-06 55.1 125 32.0
ClCG10G015190 Citrullus lanatus HOM05D000513 ORTHO05D005338 2.1e-06 55.1 125 32.8
Dinv34148 Davidia involucrata HOM05D000513 ORTHO05D005338 2.1e-06 55.1 125 33.6
Prupe.3G266700 Prunus persica HOM05D000513 ORTHO05D005338 2.1e-06 55.1 125 32.8
Haze_14520 Corylus avellana HOM05D000513 ORTHO05D005338 2.7e-06 54.7 124 33.1
VMungo1383G0284 Vigna mungo HOM05D000513 ORTHO05D005338 2.7e-06 54.7 126 31.7
CANSAT64G2318 Cannabis sativa HOM05D000513 ORTHO05D005338 3.6e-06 54.3 126 33.3
CiPaw.04G016900 Carya illinoinensis HOM05D000513 ORTHO05D005338 3.6e-06 54.3 125 32.0
BcaC05g30487 Brassica carinata HOM05D000513 ORTHO05D005338 4.7e-06 53.9 125 32.8
Cfa007565 Carpinus fangiana HOM05D000513 ORTHO05D005338 4.7e-06 53.9 125 32.0
Duzib147G1357 Durio zibethinus HOM05D000513 ORTHO05D005338 4.7e-06 53.9 125 32.8
Nn3g17255 Nelumbo nucifera HOM05D000513 ORTHO05D005338 4.7e-06 53.9 125 32.0
Sp3g00920 Schrenkiella parvula HOM05D000513 ORTHO05D005338 4.7e-06 53.9 125 32.8
AL3G11070 Arabidopsis lyrata HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
AT3G01180 Arabidopsis thaliana HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
A05p44780 Brassica napus HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
C09p75370 Brassica napus HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
BolC5t35123H Brassica oleracea HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
BraA05t23179Z Brassica rapa HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
Carub.0003s0097 Capsella rubella HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
Cfa007563 Carpinus fangiana HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.0
Ca_04285_v3 Cicer arietinum L. HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
Ca_29846_v3 Cicer arietinum L. HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
ECA238G0428 Erigeron canadensis HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.0
Thhalv10020091m.g Eutrema salsugineum HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 32.8
Lj4A110T78 Lonicera japonica HOM05D000513 ORTHO05D005338 6.1e-06 53.5 125 30.4
Gohir.D09G014100 Gossypium hirsutum HOM05D000513 ORTHO05D005338 7.9e-06 53.1 125 31.2
Gorai.006G016400 Gossypium raimondii HOM05D000513 ORTHO05D005338 7.9e-06 53.1 125 31.2


User provided reference genes

Program Settings