Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc01g014370.2 Solanum lycopersicum HOM05D000524 ORTHO05D000381 3.6e-42 174.5 87 100.0
Sopen01g009060 Solanum pennellii HOM05D000524 ORTHO05D000381 1.5e-08 62.8 67 52.2
CDE05G0746 Ceratophyllum demersum HOM05D000524 ORTHO05D000381 2.2e-07 58.9 41 68.3
Rhsim01G0060000 Rhododendron simsii HOM05D000524 ORTHO05D000381 2.9e-07 58.5 40 70.0
Lalb_Chr13g0301441 Lupinus albus HOM05D000524 ORTHO05D000381 3.8e-07 58.2 71 45.1
Psat4g036200 Pisum sativum HOM05D000524 ORTHO05D000381 3.8e-07 58.2 71 46.5
Psat7g117240 Pisum sativum HOM05D003433 ORTHO05D003921 3.8e-07 58.2 71 46.5
CAN.G551.76 Capsicum annuum HOM05D000524 ORTHO05D000381 4.9e-07 57.8 40 72.5
Duzib150G0236 Durio zibethinus HOM05D000524 ORTHO05D000381 4.9e-07 57.8 71 46.5
Duzib168G1897 Durio zibethinus HOM05D000524 ORTHO05D000381 4.9e-07 57.8 71 46.5
Nitab4.5_0002659g0040 Nicotiana tabacum HOM05D000524 ORTHO05D000381 4.9e-07 57.8 40 72.5
TPR.G7621 Trifolium pratense HOM05D000524 ORTHO05D000381 4.9e-07 57.8 71 45.1
vmacro07735 Vaccinium macrocarpon HOM05D000524 ORTHO05D000381 4.9e-07 57.8 40 67.5
VMungo1215G2429 Vigna mungo HOM05D000524 ORTHO05D000381 4.9e-07 57.8 47 66.0
CDE02G3962 Ceratophyllum demersum HOM05D000524 ORTHO05D000381 6.4e-07 57.4 41 65.9
Nitab4.5_0002329g0020 Nicotiana tabacum HOM05D000524 ORTHO05D000381 6.4e-07 57.4 40 70.0
Hund09296 Selenicereus undatus HOM05D000524 ORTHO05D000381 6.4e-07 57.4 40 70.0
Solyc07g007680.4 Solanum lycopersicum HOM05D000524 ORTHO05D000381 6.4e-07 57.4 40 67.5
Solyc12g009790.2 Solanum lycopersicum HOM05D000524 ORTHO05D000381 6.4e-07 57.4 40 70.0
Sopen07g003670 Solanum pennellii HOM05D000524 ORTHO05D000381 6.4e-07 57.4 40 67.5
Sopen12g004680 Solanum pennellii HOM05D000524 ORTHO05D000381 6.4e-07 57.4 40 70.0
PGSC0003DMG400007914 Solanum tuberosum HOM05D000524 ORTHO05D000381 6.4e-07 57.4 40 70.0
CAN.G969.2 Capsicum annuum HOM05D000524 ORTHO05D000381 8.4e-07 57.0 40 70.0
AUR62011197 Chenopodium quinoa HOM05D000524 ORTHO05D000381 8.4e-07 57.0 40 72.5
AUR62013290 Chenopodium quinoa HOM05D000524 ORTHO05D000381 8.4e-07 57.0 40 72.5
Manes.14G117400 Manihot esculenta HOM05D000524 ORTHO05D000381 8.4e-07 57.0 40 70.0
Peaxi162Scf00088g01029 Petunia axillaris HOM05D000524 ORTHO05D000381 8.4e-07 57.0 40 67.5
Peaxi162Scf02135g00019 Petunia axillaris HOM05D000524 ORTHO05D000381 8.4e-07 57.0 40 70.0
Thecc.09G134800 Theobroma cacao HOM05D000524 ORTHO05D000381 8.4e-07 57.0 71 46.5
Ca_21659_v3 Cicer arietinum L. HOM05D000524 ORTHO05D000381 1.1e-06 56.6 40 70.0
Glyma.17G109500 Glycine max HOM05D000524 ORTHO05D000381 1.1e-06 56.6 40 70.0
Gohir.A06G052900 Gossypium hirsutum HOM05D000524 ORTHO05D000381 1.1e-06 56.6 71 45.1
Gohir.D06G051900 Gossypium hirsutum HOM05D000524 ORTHO05D000381 1.1e-06 56.6 71 45.1
Gorai.010G060200 Gossypium raimondii HOM05D000524 ORTHO05D000381 1.1e-06 56.6 71 45.1
Lalb_Chr07g0179331 Lupinus albus HOM05D000524 ORTHO05D000381 1.1e-06 56.6 40 70.0
Nitab4.5_0002267g0040 Nicotiana tabacum HOM05D000524 ORTHO05D000381 1.1e-06 56.6 40 67.5
Nitab4.5_0009889g0020 Nicotiana tabacum HOM05D000524 ORTHO05D000381 1.1e-06 56.6 40 67.5
Phvul.003G170400 Phaseolus vulgaris HOM05D000524 ORTHO05D000381 1.1e-06 56.6 40 70.0
PGSC0003DMG401030679 Solanum tuberosum HOM05D000524 ORTHO05D000381 1.1e-06 56.6 40 67.5
Actinidia07332 Actinidia chinensis HOM05D000524 ORTHO05D000381 1.4e-06 56.2 40 70.0
Ah.09g224320 Amaranthus hybridus HOM05D000524 ORTHO05D000381 1.4e-06 56.2 40 72.5
COL.COLO4_15562 Corchorus olitorius HOM05D000524 ORTHO05D000381 1.4e-06 56.2 40 70.0
Dinv36465 Davidia involucrata HOM05D000524 ORTHO05D000381 1.4e-06 56.2 40 67.5
Hund04497 Selenicereus undatus HOM05D000524 ORTHO05D000381 1.4e-06 56.2 75 42.7
Sc08g0006220 Simmondsia chinensis HOM05D000524 ORTHO05D000381 1.4e-06 56.2 71 43.7
arahy.Tifrunner.gnm1.ann1.C9JQ4Z Arachis hypogaea HOM05D000524 ORTHO05D000381 1.9e-06 55.8 47 63.8
arahy.Tifrunner.gnm1.ann1.F6U1X1 Arachis hypogaea HOM05D000524 ORTHO05D000381 1.9e-06 55.8 47 63.8
CAN.G669.4 Capsicum annuum HOM05D000524 ORTHO05D000381 2.4e-06 55.5 40 67.5
Manes.03G013200 Manihot esculenta HOM05D000524 ORTHO05D000381 2.4e-06 55.5 40 70.0
Peaxi162Scf00136g00176 Petunia axillaris HOM05D000524 ORTHO05D000381 2.4e-06 55.5 40 67.5
SalBow4G0565 Salvia bowleyana HOM05D000524 ORTHO05D000381 2.4e-06 55.5 42 66.7
Sopen08g011720 Solanum pennellii HOM05D000524 ORTHO05D000381 2.4e-06 55.5 40 67.5
PGSC0003DMG400013947 Solanum tuberosum HOM05D000524 ORTHO05D000381 2.4e-06 55.5 40 67.5
SGA_v2.0_scaffold183G39906 Striga asiatica HOM05D000524 ORTHO05D000381 2.4e-06 55.5 71 45.1
AL1G15340 Arabidopsis lyrata HOM05D000524 ORTHO05D000381 3.2e-06 55.1 42 64.3
AT1G05500 Arabidopsis thaliana HOM05D000524 ORTHO05D000381 3.2e-06 55.1 42 64.3
A10p04240 Brassica napus HOM05D000524 ORTHO05D000381 3.2e-06 55.1 42 66.7
BraA10t42691Z Brassica rapa HOM05D000524 ORTHO05D000381 3.2e-06 55.1 42 66.7
Carub.0001s0482 Capsella rubella HOM05D000524 ORTHO05D000381 3.2e-06 55.1 42 64.3
Cc06_g07860 Coffea canephora HOM05D000524 ORTHO05D000381 3.2e-06 55.1 40 67.5
Migut.K00416 Erythranthe guttata HOM05D000524 ORTHO05D000381 3.2e-06 55.1 71 45.1
Thhalv10007226m.g Eutrema salsugineum HOM05D000524 ORTHO05D000381 3.2e-06 55.1 42 64.3
Gohir.A08G089100 Gossypium hirsutum HOM05D000524 ORTHO05D000381 3.2e-06 55.1 40 67.5
Gohir.D08G100300 Gossypium hirsutum HOM05D000524 ORTHO05D000381 3.2e-06 55.1 40 67.5
Gorai.004G108100 Gossypium raimondii HOM05D000524 ORTHO05D000381 3.2e-06 55.1 40 67.5
Medtr4g115660 Medicago truncatula HOM05D000524 ORTHO05D000381 3.2e-06 55.1 40 67.5
TAR383G1072 Trochodendron aralioides HOM05D000524 ORTHO05D000381 3.2e-06 55.1 49 61.2
Aa31LG1G19150 Aethionema arabicum HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
EL10Ac8g18753 Beta vulgaris HOM05D000524 ORTHO05D000381 4.2e-06 54.7 40 70.0
BcaB02g06844 Brassica carinata HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
BcaB03g13443 Brassica carinata HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
BcaC05g24377 Brassica carinata HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
BcaC07g36823 Brassica carinata HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
A08p36430 Brassica napus HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
C05p03860 Brassica napus HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
C08p01920 Brassica napus HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
BolC5t29163H Brassica oleracea HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
BolC8t46989H Brassica oleracea HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
BraA08t35546Z Brassica rapa HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
MELO3C004470.2 Cucumis melo HOM05D000524 ORTHO05D000381 4.2e-06 54.7 40 65.0
CsaV3_2G003220 Cucumis sativus L. HOM05D000524 ORTHO05D000381 4.2e-06 54.7 40 65.0
Nitab4.5_0001880g0060 Nicotiana tabacum HOM05D000524 ORTHO05D000381 4.2e-06 54.7 40 65.0
Nitab4.5_0008885g0010 Nicotiana tabacum HOM05D000524 ORTHO05D000381 4.2e-06 54.7 40 65.0
PSO210G3884 Papaver somniferum HOM05D000524 ORTHO05D000381 4.2e-06 54.7 77 41.6
Sp1g04370 Schrenkiella parvula HOM05D000524 ORTHO05D000381 4.2e-06 54.7 42 64.3
CSS0041471 Camellia sinensis var. sinensis HOM05D000524 ORTHO05D000381 5.4e-06 54.3 40 65.0
CARHR004980 Cardamine hirsuta HOM05D000524 ORTHO05D000381 5.4e-06 54.3 42 61.9
Sabra18G0027600 Salix brachista HOM05D000524 ORTHO05D000381 5.4e-06 54.3 49 59.2
PGSC0003DMG400016098 Solanum tuberosum HOM05D000524 ORTHO05D000381 5.4e-06 54.3 74 45.9
Aqoxy7G03619 Aquilegia oxysepala HOM05D000524 ORTHO05D000381 7.1e-06 53.9 42 61.9
MD02G1021500 Malus domestica HOM05D000524 ORTHO05D000381 7.1e-06 53.9 42 59.5
Potri.018G025000 Populus trichocarpa HOM05D000524 ORTHO05D000381 7.1e-06 53.9 49 61.2
Sed0006487 Sechium edule HOM05D000524 ORTHO05D000381 7.1e-06 53.9 40 65.0
ECA246G0668 Erigeron canadensis HOM05D000524 ORTHO05D000381 9.3e-06 53.5 42 64.3
Lsat_1_v5_gn_6_113460 Lactuca sativa HOM05D000524 ORTHO05D000381 9.3e-06 53.5 42 64.3
Lj4g0020589 Lotus japonicus HOM05D000524 ORTHO05D000381 9.3e-06 53.5 40 65.0
Manes.16G124000 Manihot esculenta HOM05D000524 ORTHO05D000381 9.3e-06 53.5 42 64.3


User provided reference genes

Program Settings